Range expansion underlies historical introgressive hybridization in the Iberian hare

Detalhes bibliográficos
Autor(a) principal: Marques, João P.
Data de Publicação: 2017
Outros Autores: Farelo, Liliana, Vilela, Joana, Dan Vanderpool, Alves, Paulo C., Good, Jeffrey M., Boursot, Pierre, Melo-Ferreira, José
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/110968
Resumo: Introgressive hybridization is an important and widespread evolutionary process, but the relative roles of neutral demography and natural selection in promoting massive introgression are difficult to assess and an important matter of debate. Hares from the Iberian Peninsula provide an appropriate system to study this question. In its northern range, the Iberian hare, Lepus granatensis, shows a northwards gradient of increasing mitochondrial DNA (mtDNA) introgression from the arctic/boreal L. timidus, which it presumably replaced after the last glacial maximum. Here, we asked whether a south-north expansion wave of L. granatensis into L. timidus territory could underlie mtDNA introgression, and whether nuclear genes interacting with mitochondria ("mitonuc" genes) were affected. We extended previous RNA-sequencing and produced a comprehensive annotated transcriptome assembly for L. granatensis. We then genotyped 100 discovered nuclear SNPs in 317 specimens spanning the species range. The distribution of allele frequencies across populations suggests a northwards range expansion, particularly in the region of mtDNA introgression. We found no correlation between variants at 39 mitonuc genes and mtDNA introgression frequency. Whether the nuclear and mitochondrial genomes coevolved will need a thorough investigation of the hundreds of mitonuc genes, but range expansion and species replacement likely promoted massive mtDNA introgression.
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spelling Range expansion underlies historical introgressive hybridization in the Iberian hareIntrogressive hybridization is an important and widespread evolutionary process, but the relative roles of neutral demography and natural selection in promoting massive introgression are difficult to assess and an important matter of debate. Hares from the Iberian Peninsula provide an appropriate system to study this question. In its northern range, the Iberian hare, Lepus granatensis, shows a northwards gradient of increasing mitochondrial DNA (mtDNA) introgression from the arctic/boreal L. timidus, which it presumably replaced after the last glacial maximum. Here, we asked whether a south-north expansion wave of L. granatensis into L. timidus territory could underlie mtDNA introgression, and whether nuclear genes interacting with mitochondria ("mitonuc" genes) were affected. We extended previous RNA-sequencing and produced a comprehensive annotated transcriptome assembly for L. granatensis. We then genotyped 100 discovered nuclear SNPs in 317 specimens spanning the species range. The distribution of allele frequencies across populations suggests a northwards range expansion, particularly in the region of mtDNA introgression. We found no correlation between variants at 39 mitonuc genes and mtDNA introgression frequency. Whether the nuclear and mitochondrial genomes coevolved will need a thorough investigation of the hundreds of mitonuc genes, but range expansion and species replacement likely promoted massive mtDNA introgression.2017-01-252017-01-25T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10216/110968eng2045-232210.1038/srep40788Marques, João P.Farelo, LilianaVilela, JoanaDan VanderpoolAlves, Paulo C.Good, Jeffrey M.Boursot, PierreMelo-Ferreira, Joséinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-26T14:10:11ZPortal AgregadorONG
dc.title.none.fl_str_mv Range expansion underlies historical introgressive hybridization in the Iberian hare
title Range expansion underlies historical introgressive hybridization in the Iberian hare
spellingShingle Range expansion underlies historical introgressive hybridization in the Iberian hare
Marques, João P.
title_short Range expansion underlies historical introgressive hybridization in the Iberian hare
title_full Range expansion underlies historical introgressive hybridization in the Iberian hare
title_fullStr Range expansion underlies historical introgressive hybridization in the Iberian hare
title_full_unstemmed Range expansion underlies historical introgressive hybridization in the Iberian hare
title_sort Range expansion underlies historical introgressive hybridization in the Iberian hare
author Marques, João P.
author_facet Marques, João P.
Farelo, Liliana
Vilela, Joana
Dan Vanderpool
Alves, Paulo C.
Good, Jeffrey M.
Boursot, Pierre
Melo-Ferreira, José
author_role author
author2 Farelo, Liliana
Vilela, Joana
Dan Vanderpool
Alves, Paulo C.
Good, Jeffrey M.
Boursot, Pierre
Melo-Ferreira, José
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Marques, João P.
Farelo, Liliana
Vilela, Joana
Dan Vanderpool
Alves, Paulo C.
Good, Jeffrey M.
Boursot, Pierre
Melo-Ferreira, José
description Introgressive hybridization is an important and widespread evolutionary process, but the relative roles of neutral demography and natural selection in promoting massive introgression are difficult to assess and an important matter of debate. Hares from the Iberian Peninsula provide an appropriate system to study this question. In its northern range, the Iberian hare, Lepus granatensis, shows a northwards gradient of increasing mitochondrial DNA (mtDNA) introgression from the arctic/boreal L. timidus, which it presumably replaced after the last glacial maximum. Here, we asked whether a south-north expansion wave of L. granatensis into L. timidus territory could underlie mtDNA introgression, and whether nuclear genes interacting with mitochondria ("mitonuc" genes) were affected. We extended previous RNA-sequencing and produced a comprehensive annotated transcriptome assembly for L. granatensis. We then genotyped 100 discovered nuclear SNPs in 317 specimens spanning the species range. The distribution of allele frequencies across populations suggests a northwards range expansion, particularly in the region of mtDNA introgression. We found no correlation between variants at 39 mitonuc genes and mtDNA introgression frequency. Whether the nuclear and mitochondrial genomes coevolved will need a thorough investigation of the hundreds of mitonuc genes, but range expansion and species replacement likely promoted massive mtDNA introgression.
publishDate 2017
dc.date.none.fl_str_mv 2017-01-25
2017-01-25T00:00:00Z
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dc.identifier.uri.fl_str_mv https://hdl.handle.net/10216/110968
url https://hdl.handle.net/10216/110968
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2045-2322
10.1038/srep40788
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