Is the high frequency of machado-joseph disease in China due to new mutational orignis?
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | https://hdl.handle.net/10216/136316 |
Resumo: | Machado-Joseph disease (MJD, also known as spinocerebellar ataxia 3 or SCA3) is the most common dominant ataxia worldwide, with an overall average prevalence of 1-5/100,000. To this date, two major ancestral lineages have been found throughout the world. In China, the relative frequency of MJD among the SCAs reaches as high as 63%, however, little is known about its mutational origin in this country. We analyzed 50 families with MJD patients in two or more generations to study the hypothesis that new mutational events have occurred in this population. Haplotypes based on 20 SNPs have shown new genetic backgrounds segregating with MJD mutations in our cohort from China. We found the "Joseph-derived" lineage (Joseph lineage with a G variant in rs56268847) to be very common among Chinese MJD patients. Moreover, we estimated the time for the origin of this MJD SNP background based on STR diversity flanking the (CAG)n of ATXN3. It was surprising to find that the Chinese MJD population originated from 8,000 to 17,000 years ago, far earlier than the previous literature reports, which will be an important evidence to explain the origin, spread and founder effects of MJD. |
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Is the high frequency of machado-joseph disease in China due to new mutational orignis?Founder EffectHaplotypeMachado-Joseph DiseaseMutational OriginsSca3Spinocerebellar Ataxia Type 3Machado-Joseph disease (MJD, also known as spinocerebellar ataxia 3 or SCA3) is the most common dominant ataxia worldwide, with an overall average prevalence of 1-5/100,000. To this date, two major ancestral lineages have been found throughout the world. In China, the relative frequency of MJD among the SCAs reaches as high as 63%, however, little is known about its mutational origin in this country. We analyzed 50 families with MJD patients in two or more generations to study the hypothesis that new mutational events have occurred in this population. Haplotypes based on 20 SNPs have shown new genetic backgrounds segregating with MJD mutations in our cohort from China. We found the "Joseph-derived" lineage (Joseph lineage with a G variant in rs56268847) to be very common among Chinese MJD patients. Moreover, we estimated the time for the origin of this MJD SNP background based on STR diversity flanking the (CAG)n of ATXN3. It was surprising to find that the Chinese MJD population originated from 8,000 to 17,000 years ago, far earlier than the previous literature reports, which will be an important evidence to explain the origin, spread and founder effects of MJD.Frontiers Media20192019-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10216/136316eng1664-802110.3389/fgene.2018.00740Li, TMartins, SPeng, YWang, PHou, XChen, ZWang, CTang, ZQiu, RChen, CHu, ZXia, KTang, BSequeiros, JJiang, Hinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-09-27T06:32:35Zoai:repositorio-aberto.up.pt:10216/136316Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-09-27T06:32:35Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Is the high frequency of machado-joseph disease in China due to new mutational orignis? |
title |
Is the high frequency of machado-joseph disease in China due to new mutational orignis? |
spellingShingle |
Is the high frequency of machado-joseph disease in China due to new mutational orignis? Li, T Founder Effect Haplotype Machado-Joseph Disease Mutational Origins Sca3 Spinocerebellar Ataxia Type 3 |
title_short |
Is the high frequency of machado-joseph disease in China due to new mutational orignis? |
title_full |
Is the high frequency of machado-joseph disease in China due to new mutational orignis? |
title_fullStr |
Is the high frequency of machado-joseph disease in China due to new mutational orignis? |
title_full_unstemmed |
Is the high frequency of machado-joseph disease in China due to new mutational orignis? |
title_sort |
Is the high frequency of machado-joseph disease in China due to new mutational orignis? |
author |
Li, T |
author_facet |
Li, T Martins, S Peng, Y Wang, P Hou, X Chen, Z Wang, C Tang, Z Qiu, R Chen, C Hu, Z Xia, K Tang, B Sequeiros, J Jiang, H |
author_role |
author |
author2 |
Martins, S Peng, Y Wang, P Hou, X Chen, Z Wang, C Tang, Z Qiu, R Chen, C Hu, Z Xia, K Tang, B Sequeiros, J Jiang, H |
author2_role |
author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Li, T Martins, S Peng, Y Wang, P Hou, X Chen, Z Wang, C Tang, Z Qiu, R Chen, C Hu, Z Xia, K Tang, B Sequeiros, J Jiang, H |
dc.subject.por.fl_str_mv |
Founder Effect Haplotype Machado-Joseph Disease Mutational Origins Sca3 Spinocerebellar Ataxia Type 3 |
topic |
Founder Effect Haplotype Machado-Joseph Disease Mutational Origins Sca3 Spinocerebellar Ataxia Type 3 |
description |
Machado-Joseph disease (MJD, also known as spinocerebellar ataxia 3 or SCA3) is the most common dominant ataxia worldwide, with an overall average prevalence of 1-5/100,000. To this date, two major ancestral lineages have been found throughout the world. In China, the relative frequency of MJD among the SCAs reaches as high as 63%, however, little is known about its mutational origin in this country. We analyzed 50 families with MJD patients in two or more generations to study the hypothesis that new mutational events have occurred in this population. Haplotypes based on 20 SNPs have shown new genetic backgrounds segregating with MJD mutations in our cohort from China. We found the "Joseph-derived" lineage (Joseph lineage with a G variant in rs56268847) to be very common among Chinese MJD patients. Moreover, we estimated the time for the origin of this MJD SNP background based on STR diversity flanking the (CAG)n of ATXN3. It was surprising to find that the Chinese MJD population originated from 8,000 to 17,000 years ago, far earlier than the previous literature reports, which will be an important evidence to explain the origin, spread and founder effects of MJD. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019 2019-01-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://hdl.handle.net/10216/136316 |
url |
https://hdl.handle.net/10216/136316 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
1664-8021 10.3389/fgene.2018.00740 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Frontiers Media |
publisher.none.fl_str_mv |
Frontiers Media |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
mluisa.alvim@gmail.com |
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1817547311630254080 |