Next‐generation biological control: the need for integrating genetics and genomics

Detalhes bibliográficos
Autor(a) principal: Leung, Kelley
Data de Publicação: 2020
Outros Autores: Ras, Erica, Ferguson, Kim B., Ariëns, Simone, Babendreier, Dirk, Bijma, Piter, Bourtzis, Kostas, Brodeur, Jacques, Bruins, Margreet A., Centurión, Alejandra, Chattington, Sophie R., Chinchilla‐Ramírez, Milena, Dicke, Marcel, Fatouros, Nina E., González‐Cabrera, Joel, Groot, Thomas V. M., Haye, Tim, Knapp, Markus, Koskinioti, Panagiota, Le Hesran, Sophie, Lyrakis, Manolis, Paspati, Angeliki, Pérez‐Hedo, Meritxell, Plouvier, Wouter N., Schlötterer, Christian, Stahl, Judith M., Thiel, Andra, Urbaneja, Alberto, Zande, Louis, Verhulst, Eveline C., Vet, Louise E. M., Visser, Sander, Werren, John H., Xia, Shuwen, Zwaan, Bas J., Magalhaes, S, Beukeboom, Leo W., Pannebakker, Bart A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10451/45437
Resumo: Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Next, the genes or markers linked to these traits need be determined, including how to implement this information into a selective breeding program. Choosing a trait can be assisted by modelling to account for the proper agro-ecological context, and by knowing which traits have sufficiently high heritability values. We provide guidelines for designing genomic strategies in biocontrol programs, which depend on the organism, budget, and desired objective. Genomic approaches start with genome sequencing and assembly. We provide a guide for deciding the most successful sequencing strategy for biocontrol agents. Gene discovery involves quantitative trait loci analyses, transcriptomic and proteomic studies, and gene editing. Improving biocontrol practices includes marker-assisted selection, genomic selection and microbiome manipulation of biocontrol agents, and monitoring for genetic variation during rearing and post-release. We conclude by identifying the most promising applications of genetic and genomic methods to improve biological control efficacy.
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spelling Next‐generation biological control: the need for integrating genetics and genomicsBiological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Next, the genes or markers linked to these traits need be determined, including how to implement this information into a selective breeding program. Choosing a trait can be assisted by modelling to account for the proper agro-ecological context, and by knowing which traits have sufficiently high heritability values. We provide guidelines for designing genomic strategies in biocontrol programs, which depend on the organism, budget, and desired objective. Genomic approaches start with genome sequencing and assembly. We provide a guide for deciding the most successful sequencing strategy for biocontrol agents. Gene discovery involves quantitative trait loci analyses, transcriptomic and proteomic studies, and gene editing. Improving biocontrol practices includes marker-assisted selection, genomic selection and microbiome manipulation of biocontrol agents, and monitoring for genetic variation during rearing and post-release. We conclude by identifying the most promising applications of genetic and genomic methods to improve biological control efficacy.WileyRepositório da Universidade de LisboaLeung, KelleyRas, EricaFerguson, Kim B.Ariëns, SimoneBabendreier, DirkBijma, PiterBourtzis, KostasBrodeur, JacquesBruins, Margreet A.Centurión, AlejandraChattington, Sophie R.Chinchilla‐Ramírez, MilenaDicke, MarcelFatouros, Nina E.González‐Cabrera, JoelGroot, Thomas V. M.Haye, TimKnapp, MarkusKoskinioti, PanagiotaLe Hesran, SophieLyrakis, ManolisPaspati, AngelikiPérez‐Hedo, MeritxellPlouvier, Wouter N.Schlötterer, ChristianStahl, Judith M.Thiel, AndraUrbaneja, AlbertoZande, LouisVerhulst, Eveline C.Vet, Louise E. M.Visser, SanderWerren, John H.Xia, ShuwenZwaan, Bas J.Magalhaes, SBeukeboom, Leo W.Pannebakker, Bart A.2020-12-17T18:48:35Z2020-082020-08-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10451/45437engLeung, K., Ras, E., Ferguson, K.B., Ariëns, S., Babendreier, D., Bijma, P., Bourtzis, K., Brodeur, J., Bruins, M.A., Centurión, A., Chattington, S.R., Chinchilla‐Ramírez, M., Dicke, M., Fatouros, N.E., González‐Cabrera, J., Groot, T.V.M., Haye, T., Knapp, M., Koskinioti, P., Le Hesran, S., Lyrakis, M., Paspati, A., Pérez‐Hedo, M., Plouvier, W.N., Schlötterer, C., Stahl, J.M., Thiel, A., Urbaneja, A., van de Zande, L., Verhulst, E.C., Vet, L.E.M., Visser, S., Werren, J.H., Xia, S., Zwaan, B.J., Magalhães, S., Beukeboom, L.W. and Pannebakker, B.A. (2020), Next‐generation biological control: the need for integrating genetics and genomics. Biol Rev, 95: 1838-1854. https://doi.org/10.1111/brv.1264110.1111/brv.12641info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-11-20T18:01:29Zoai:repositorio.ul.pt:10451/45437Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-11-20T18:01:29Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Next‐generation biological control: the need for integrating genetics and genomics
title Next‐generation biological control: the need for integrating genetics and genomics
spellingShingle Next‐generation biological control: the need for integrating genetics and genomics
Leung, Kelley
title_short Next‐generation biological control: the need for integrating genetics and genomics
title_full Next‐generation biological control: the need for integrating genetics and genomics
title_fullStr Next‐generation biological control: the need for integrating genetics and genomics
title_full_unstemmed Next‐generation biological control: the need for integrating genetics and genomics
title_sort Next‐generation biological control: the need for integrating genetics and genomics
author Leung, Kelley
author_facet Leung, Kelley
Ras, Erica
Ferguson, Kim B.
Ariëns, Simone
Babendreier, Dirk
Bijma, Piter
Bourtzis, Kostas
Brodeur, Jacques
Bruins, Margreet A.
Centurión, Alejandra
Chattington, Sophie R.
Chinchilla‐Ramírez, Milena
Dicke, Marcel
Fatouros, Nina E.
González‐Cabrera, Joel
Groot, Thomas V. M.
Haye, Tim
Knapp, Markus
Koskinioti, Panagiota
Le Hesran, Sophie
Lyrakis, Manolis
Paspati, Angeliki
Pérez‐Hedo, Meritxell
Plouvier, Wouter N.
Schlötterer, Christian
Stahl, Judith M.
Thiel, Andra
Urbaneja, Alberto
Zande, Louis
Verhulst, Eveline C.
Vet, Louise E. M.
Visser, Sander
Werren, John H.
Xia, Shuwen
Zwaan, Bas J.
Magalhaes, S
Beukeboom, Leo W.
Pannebakker, Bart A.
author_role author
author2 Ras, Erica
Ferguson, Kim B.
Ariëns, Simone
Babendreier, Dirk
Bijma, Piter
Bourtzis, Kostas
Brodeur, Jacques
Bruins, Margreet A.
Centurión, Alejandra
Chattington, Sophie R.
Chinchilla‐Ramírez, Milena
Dicke, Marcel
Fatouros, Nina E.
González‐Cabrera, Joel
Groot, Thomas V. M.
Haye, Tim
Knapp, Markus
Koskinioti, Panagiota
Le Hesran, Sophie
Lyrakis, Manolis
Paspati, Angeliki
Pérez‐Hedo, Meritxell
Plouvier, Wouter N.
Schlötterer, Christian
Stahl, Judith M.
Thiel, Andra
Urbaneja, Alberto
Zande, Louis
Verhulst, Eveline C.
Vet, Louise E. M.
Visser, Sander
Werren, John H.
Xia, Shuwen
Zwaan, Bas J.
Magalhaes, S
Beukeboom, Leo W.
Pannebakker, Bart A.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório da Universidade de Lisboa
dc.contributor.author.fl_str_mv Leung, Kelley
Ras, Erica
Ferguson, Kim B.
Ariëns, Simone
Babendreier, Dirk
Bijma, Piter
Bourtzis, Kostas
Brodeur, Jacques
Bruins, Margreet A.
Centurión, Alejandra
Chattington, Sophie R.
Chinchilla‐Ramírez, Milena
Dicke, Marcel
Fatouros, Nina E.
González‐Cabrera, Joel
Groot, Thomas V. M.
Haye, Tim
Knapp, Markus
Koskinioti, Panagiota
Le Hesran, Sophie
Lyrakis, Manolis
Paspati, Angeliki
Pérez‐Hedo, Meritxell
Plouvier, Wouter N.
Schlötterer, Christian
Stahl, Judith M.
Thiel, Andra
Urbaneja, Alberto
Zande, Louis
Verhulst, Eveline C.
Vet, Louise E. M.
Visser, Sander
Werren, John H.
Xia, Shuwen
Zwaan, Bas J.
Magalhaes, S
Beukeboom, Leo W.
Pannebakker, Bart A.
description Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Next, the genes or markers linked to these traits need be determined, including how to implement this information into a selective breeding program. Choosing a trait can be assisted by modelling to account for the proper agro-ecological context, and by knowing which traits have sufficiently high heritability values. We provide guidelines for designing genomic strategies in biocontrol programs, which depend on the organism, budget, and desired objective. Genomic approaches start with genome sequencing and assembly. We provide a guide for deciding the most successful sequencing strategy for biocontrol agents. Gene discovery involves quantitative trait loci analyses, transcriptomic and proteomic studies, and gene editing. Improving biocontrol practices includes marker-assisted selection, genomic selection and microbiome manipulation of biocontrol agents, and monitoring for genetic variation during rearing and post-release. We conclude by identifying the most promising applications of genetic and genomic methods to improve biological control efficacy.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-17T18:48:35Z
2020-08
2020-08-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10451/45437
url http://hdl.handle.net/10451/45437
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Leung, K., Ras, E., Ferguson, K.B., Ariëns, S., Babendreier, D., Bijma, P., Bourtzis, K., Brodeur, J., Bruins, M.A., Centurión, A., Chattington, S.R., Chinchilla‐Ramírez, M., Dicke, M., Fatouros, N.E., González‐Cabrera, J., Groot, T.V.M., Haye, T., Knapp, M., Koskinioti, P., Le Hesran, S., Lyrakis, M., Paspati, A., Pérez‐Hedo, M., Plouvier, W.N., Schlötterer, C., Stahl, J.M., Thiel, A., Urbaneja, A., van de Zande, L., Verhulst, E.C., Vet, L.E.M., Visser, S., Werren, J.H., Xia, S., Zwaan, B.J., Magalhães, S., Beukeboom, L.W. and Pannebakker, B.A. (2020), Next‐generation biological control: the need for integrating genetics and genomics. Biol Rev, 95: 1838-1854. https://doi.org/10.1111/brv.12641
10.1111/brv.12641
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Wiley
publisher.none.fl_str_mv Wiley
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv mluisa.alvim@gmail.com
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