Next‐generation biological control: the need for integrating genetics and genomics
Autor(a) principal: | |
---|---|
Data de Publicação: | 2020 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10451/45437 |
Resumo: | Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Next, the genes or markers linked to these traits need be determined, including how to implement this information into a selective breeding program. Choosing a trait can be assisted by modelling to account for the proper agro-ecological context, and by knowing which traits have sufficiently high heritability values. We provide guidelines for designing genomic strategies in biocontrol programs, which depend on the organism, budget, and desired objective. Genomic approaches start with genome sequencing and assembly. We provide a guide for deciding the most successful sequencing strategy for biocontrol agents. Gene discovery involves quantitative trait loci analyses, transcriptomic and proteomic studies, and gene editing. Improving biocontrol practices includes marker-assisted selection, genomic selection and microbiome manipulation of biocontrol agents, and monitoring for genetic variation during rearing and post-release. We conclude by identifying the most promising applications of genetic and genomic methods to improve biological control efficacy. |
id |
RCAP_94626428c7e7253c1df3be933474262d |
---|---|
oai_identifier_str |
oai:repositorio.ul.pt:10451/45437 |
network_acronym_str |
RCAP |
network_name_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository_id_str |
7160 |
spelling |
Next‐generation biological control: the need for integrating genetics and genomicsBiological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Next, the genes or markers linked to these traits need be determined, including how to implement this information into a selective breeding program. Choosing a trait can be assisted by modelling to account for the proper agro-ecological context, and by knowing which traits have sufficiently high heritability values. We provide guidelines for designing genomic strategies in biocontrol programs, which depend on the organism, budget, and desired objective. Genomic approaches start with genome sequencing and assembly. We provide a guide for deciding the most successful sequencing strategy for biocontrol agents. Gene discovery involves quantitative trait loci analyses, transcriptomic and proteomic studies, and gene editing. Improving biocontrol practices includes marker-assisted selection, genomic selection and microbiome manipulation of biocontrol agents, and monitoring for genetic variation during rearing and post-release. We conclude by identifying the most promising applications of genetic and genomic methods to improve biological control efficacy.WileyRepositório da Universidade de LisboaLeung, KelleyRas, EricaFerguson, Kim B.Ariëns, SimoneBabendreier, DirkBijma, PiterBourtzis, KostasBrodeur, JacquesBruins, Margreet A.Centurión, AlejandraChattington, Sophie R.Chinchilla‐Ramírez, MilenaDicke, MarcelFatouros, Nina E.González‐Cabrera, JoelGroot, Thomas V. M.Haye, TimKnapp, MarkusKoskinioti, PanagiotaLe Hesran, SophieLyrakis, ManolisPaspati, AngelikiPérez‐Hedo, MeritxellPlouvier, Wouter N.Schlötterer, ChristianStahl, Judith M.Thiel, AndraUrbaneja, AlbertoZande, LouisVerhulst, Eveline C.Vet, Louise E. M.Visser, SanderWerren, John H.Xia, ShuwenZwaan, Bas J.Magalhaes, SBeukeboom, Leo W.Pannebakker, Bart A.2020-12-17T18:48:35Z2020-082020-08-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10451/45437engLeung, K., Ras, E., Ferguson, K.B., Ariëns, S., Babendreier, D., Bijma, P., Bourtzis, K., Brodeur, J., Bruins, M.A., Centurión, A., Chattington, S.R., Chinchilla‐Ramírez, M., Dicke, M., Fatouros, N.E., González‐Cabrera, J., Groot, T.V.M., Haye, T., Knapp, M., Koskinioti, P., Le Hesran, S., Lyrakis, M., Paspati, A., Pérez‐Hedo, M., Plouvier, W.N., Schlötterer, C., Stahl, J.M., Thiel, A., Urbaneja, A., van de Zande, L., Verhulst, E.C., Vet, L.E.M., Visser, S., Werren, J.H., Xia, S., Zwaan, B.J., Magalhães, S., Beukeboom, L.W. and Pannebakker, B.A. (2020), Next‐generation biological control: the need for integrating genetics and genomics. Biol Rev, 95: 1838-1854. https://doi.org/10.1111/brv.1264110.1111/brv.12641info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-11-20T18:01:29Zoai:repositorio.ul.pt:10451/45437Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-11-20T18:01:29Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Next‐generation biological control: the need for integrating genetics and genomics |
title |
Next‐generation biological control: the need for integrating genetics and genomics |
spellingShingle |
Next‐generation biological control: the need for integrating genetics and genomics Leung, Kelley |
title_short |
Next‐generation biological control: the need for integrating genetics and genomics |
title_full |
Next‐generation biological control: the need for integrating genetics and genomics |
title_fullStr |
Next‐generation biological control: the need for integrating genetics and genomics |
title_full_unstemmed |
Next‐generation biological control: the need for integrating genetics and genomics |
title_sort |
Next‐generation biological control: the need for integrating genetics and genomics |
author |
Leung, Kelley |
author_facet |
Leung, Kelley Ras, Erica Ferguson, Kim B. Ariëns, Simone Babendreier, Dirk Bijma, Piter Bourtzis, Kostas Brodeur, Jacques Bruins, Margreet A. Centurión, Alejandra Chattington, Sophie R. Chinchilla‐Ramírez, Milena Dicke, Marcel Fatouros, Nina E. González‐Cabrera, Joel Groot, Thomas V. M. Haye, Tim Knapp, Markus Koskinioti, Panagiota Le Hesran, Sophie Lyrakis, Manolis Paspati, Angeliki Pérez‐Hedo, Meritxell Plouvier, Wouter N. Schlötterer, Christian Stahl, Judith M. Thiel, Andra Urbaneja, Alberto Zande, Louis Verhulst, Eveline C. Vet, Louise E. M. Visser, Sander Werren, John H. Xia, Shuwen Zwaan, Bas J. Magalhaes, S Beukeboom, Leo W. Pannebakker, Bart A. |
author_role |
author |
author2 |
Ras, Erica Ferguson, Kim B. Ariëns, Simone Babendreier, Dirk Bijma, Piter Bourtzis, Kostas Brodeur, Jacques Bruins, Margreet A. Centurión, Alejandra Chattington, Sophie R. Chinchilla‐Ramírez, Milena Dicke, Marcel Fatouros, Nina E. González‐Cabrera, Joel Groot, Thomas V. M. Haye, Tim Knapp, Markus Koskinioti, Panagiota Le Hesran, Sophie Lyrakis, Manolis Paspati, Angeliki Pérez‐Hedo, Meritxell Plouvier, Wouter N. Schlötterer, Christian Stahl, Judith M. Thiel, Andra Urbaneja, Alberto Zande, Louis Verhulst, Eveline C. Vet, Louise E. M. Visser, Sander Werren, John H. Xia, Shuwen Zwaan, Bas J. Magalhaes, S Beukeboom, Leo W. Pannebakker, Bart A. |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório da Universidade de Lisboa |
dc.contributor.author.fl_str_mv |
Leung, Kelley Ras, Erica Ferguson, Kim B. Ariëns, Simone Babendreier, Dirk Bijma, Piter Bourtzis, Kostas Brodeur, Jacques Bruins, Margreet A. Centurión, Alejandra Chattington, Sophie R. Chinchilla‐Ramírez, Milena Dicke, Marcel Fatouros, Nina E. González‐Cabrera, Joel Groot, Thomas V. M. Haye, Tim Knapp, Markus Koskinioti, Panagiota Le Hesran, Sophie Lyrakis, Manolis Paspati, Angeliki Pérez‐Hedo, Meritxell Plouvier, Wouter N. Schlötterer, Christian Stahl, Judith M. Thiel, Andra Urbaneja, Alberto Zande, Louis Verhulst, Eveline C. Vet, Louise E. M. Visser, Sander Werren, John H. Xia, Shuwen Zwaan, Bas J. Magalhaes, S Beukeboom, Leo W. Pannebakker, Bart A. |
description |
Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Next, the genes or markers linked to these traits need be determined, including how to implement this information into a selective breeding program. Choosing a trait can be assisted by modelling to account for the proper agro-ecological context, and by knowing which traits have sufficiently high heritability values. We provide guidelines for designing genomic strategies in biocontrol programs, which depend on the organism, budget, and desired objective. Genomic approaches start with genome sequencing and assembly. We provide a guide for deciding the most successful sequencing strategy for biocontrol agents. Gene discovery involves quantitative trait loci analyses, transcriptomic and proteomic studies, and gene editing. Improving biocontrol practices includes marker-assisted selection, genomic selection and microbiome manipulation of biocontrol agents, and monitoring for genetic variation during rearing and post-release. We conclude by identifying the most promising applications of genetic and genomic methods to improve biological control efficacy. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-12-17T18:48:35Z 2020-08 2020-08-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10451/45437 |
url |
http://hdl.handle.net/10451/45437 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Leung, K., Ras, E., Ferguson, K.B., Ariëns, S., Babendreier, D., Bijma, P., Bourtzis, K., Brodeur, J., Bruins, M.A., Centurión, A., Chattington, S.R., Chinchilla‐Ramírez, M., Dicke, M., Fatouros, N.E., González‐Cabrera, J., Groot, T.V.M., Haye, T., Knapp, M., Koskinioti, P., Le Hesran, S., Lyrakis, M., Paspati, A., Pérez‐Hedo, M., Plouvier, W.N., Schlötterer, C., Stahl, J.M., Thiel, A., Urbaneja, A., van de Zande, L., Verhulst, E.C., Vet, L.E.M., Visser, S., Werren, J.H., Xia, S., Zwaan, B.J., Magalhães, S., Beukeboom, L.W. and Pannebakker, B.A. (2020), Next‐generation biological control: the need for integrating genetics and genomics. Biol Rev, 95: 1838-1854. https://doi.org/10.1111/brv.12641 10.1111/brv.12641 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Wiley |
publisher.none.fl_str_mv |
Wiley |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
mluisa.alvim@gmail.com |
_version_ |
1817549114185875456 |