Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10316/101246 https://doi.org/10.3390/photochem2020028 |
Resumo: | The conformational space of the natural product thymol (2-isopropyl-5-methylphenol) was investigated using quantum chemical calculations at the B3LYP and MP2 levels, which revealed the existence of four types of conformers differing in the orientation of the isopropyl and hydroxyl groups. Thymol monomers were isolated in noble gas (Ar and Xe) matrices (at 15 K) and characterized by IR spectroscopy. With the support of B3LYP harmonic vibrational calculations, the two most stable trans-OH-conformers, differing in the isopropyl orientation, were identified in the cryomatrices. The two less stable cis-OH conformers were not detected as they shall undergo fast tunneling to the most stable ones. Annealing experiments in a Xe matrix up to 75 K did not lead to any conversion between the two isolated conformers, which is in accordance with the significative energy barrier computed for rotamerization of the bulky isopropyl group (~24 kJ mol−1). Vibrational excitation promoted by broadband or by narrowband irradiation, at the 2ν(OH) frequencies of the isolated conformers, did not lead to any conversion either, which was interpreted in terms of a more efficient energy transfer to the hydroxyl rotamerization (associated with a lower energy barrier and a light H-atom) than to the isopropyl rotamerization coordinate. Broadband UV irradiation experiments (λ > 200 nm) led to a prompt transformation of matrix isolated thymol, with spectroscopic evidence suggesting the formation of isomeric alkyl-substituted cyclohexadienones, Dewar isomers and open-chain conjugated ketenes. The photochemical mechanism interpretation concords with that reported for analogous phenol derivatives. |
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Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas CryomatricesThe conformational space of the natural product thymol (2-isopropyl-5-methylphenol) was investigated using quantum chemical calculations at the B3LYP and MP2 levels, which revealed the existence of four types of conformers differing in the orientation of the isopropyl and hydroxyl groups. Thymol monomers were isolated in noble gas (Ar and Xe) matrices (at 15 K) and characterized by IR spectroscopy. With the support of B3LYP harmonic vibrational calculations, the two most stable trans-OH-conformers, differing in the isopropyl orientation, were identified in the cryomatrices. The two less stable cis-OH conformers were not detected as they shall undergo fast tunneling to the most stable ones. Annealing experiments in a Xe matrix up to 75 K did not lead to any conversion between the two isolated conformers, which is in accordance with the significative energy barrier computed for rotamerization of the bulky isopropyl group (~24 kJ mol−1). Vibrational excitation promoted by broadband or by narrowband irradiation, at the 2ν(OH) frequencies of the isolated conformers, did not lead to any conversion either, which was interpreted in terms of a more efficient energy transfer to the hydroxyl rotamerization (associated with a lower energy barrier and a light H-atom) than to the isopropyl rotamerization coordinate. Broadband UV irradiation experiments (λ > 200 nm) led to a prompt transformation of matrix isolated thymol, with spectroscopic evidence suggesting the formation of isomeric alkyl-substituted cyclohexadienones, Dewar isomers and open-chain conjugated ketenes. The photochemical mechanism interpretation concords with that reported for analogous phenol derivatives.Multidisciplinary Digital Publishing Institute2022-06-07info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/101246http://hdl.handle.net/10316/101246https://doi.org/10.3390/photochem2020028eng2673-7256https://doi.org/10.3390/photochem2020028Jesus, A. J. LopesNunes, Cláudio ManaiaReva, Igorinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-08-17T23:02:26Zoai:estudogeral.uc.pt:10316/101246Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:18:28.726496Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices |
title |
Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices |
spellingShingle |
Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices Jesus, A. J. Lopes |
title_short |
Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices |
title_full |
Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices |
title_fullStr |
Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices |
title_full_unstemmed |
Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices |
title_sort |
Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices |
author |
Jesus, A. J. Lopes |
author_facet |
Jesus, A. J. Lopes Nunes, Cláudio Manaia Reva, Igor |
author_role |
author |
author2 |
Nunes, Cláudio Manaia Reva, Igor |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Jesus, A. J. Lopes Nunes, Cláudio Manaia Reva, Igor |
description |
The conformational space of the natural product thymol (2-isopropyl-5-methylphenol) was investigated using quantum chemical calculations at the B3LYP and MP2 levels, which revealed the existence of four types of conformers differing in the orientation of the isopropyl and hydroxyl groups. Thymol monomers were isolated in noble gas (Ar and Xe) matrices (at 15 K) and characterized by IR spectroscopy. With the support of B3LYP harmonic vibrational calculations, the two most stable trans-OH-conformers, differing in the isopropyl orientation, were identified in the cryomatrices. The two less stable cis-OH conformers were not detected as they shall undergo fast tunneling to the most stable ones. Annealing experiments in a Xe matrix up to 75 K did not lead to any conversion between the two isolated conformers, which is in accordance with the significative energy barrier computed for rotamerization of the bulky isopropyl group (~24 kJ mol−1). Vibrational excitation promoted by broadband or by narrowband irradiation, at the 2ν(OH) frequencies of the isolated conformers, did not lead to any conversion either, which was interpreted in terms of a more efficient energy transfer to the hydroxyl rotamerization (associated with a lower energy barrier and a light H-atom) than to the isopropyl rotamerization coordinate. Broadband UV irradiation experiments (λ > 200 nm) led to a prompt transformation of matrix isolated thymol, with spectroscopic evidence suggesting the formation of isomeric alkyl-substituted cyclohexadienones, Dewar isomers and open-chain conjugated ketenes. The photochemical mechanism interpretation concords with that reported for analogous phenol derivatives. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-06-07 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10316/101246 http://hdl.handle.net/10316/101246 https://doi.org/10.3390/photochem2020028 |
url |
http://hdl.handle.net/10316/101246 https://doi.org/10.3390/photochem2020028 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
2673-7256 https://doi.org/10.3390/photochem2020028 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Multidisciplinary Digital Publishing Institute |
publisher.none.fl_str_mv |
Multidisciplinary Digital Publishing Institute |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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1799134079167234048 |