Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices

Detalhes bibliográficos
Autor(a) principal: Jesus, A. J. Lopes
Data de Publicação: 2022
Outros Autores: Nunes, Cláudio Manaia, Reva, Igor
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/101246
https://doi.org/10.3390/photochem2020028
Resumo: The conformational space of the natural product thymol (2-isopropyl-5-methylphenol) was investigated using quantum chemical calculations at the B3LYP and MP2 levels, which revealed the existence of four types of conformers differing in the orientation of the isopropyl and hydroxyl groups. Thymol monomers were isolated in noble gas (Ar and Xe) matrices (at 15 K) and characterized by IR spectroscopy. With the support of B3LYP harmonic vibrational calculations, the two most stable trans-OH-conformers, differing in the isopropyl orientation, were identified in the cryomatrices. The two less stable cis-OH conformers were not detected as they shall undergo fast tunneling to the most stable ones. Annealing experiments in a Xe matrix up to 75 K did not lead to any conversion between the two isolated conformers, which is in accordance with the significative energy barrier computed for rotamerization of the bulky isopropyl group (~24 kJ mol−1). Vibrational excitation promoted by broadband or by narrowband irradiation, at the 2ν(OH) frequencies of the isolated conformers, did not lead to any conversion either, which was interpreted in terms of a more efficient energy transfer to the hydroxyl rotamerization (associated with a lower energy barrier and a light H-atom) than to the isopropyl rotamerization coordinate. Broadband UV irradiation experiments (λ > 200 nm) led to a prompt transformation of matrix isolated thymol, with spectroscopic evidence suggesting the formation of isomeric alkyl-substituted cyclohexadienones, Dewar isomers and open-chain conjugated ketenes. The photochemical mechanism interpretation concords with that reported for analogous phenol derivatives.
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spelling Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas CryomatricesThe conformational space of the natural product thymol (2-isopropyl-5-methylphenol) was investigated using quantum chemical calculations at the B3LYP and MP2 levels, which revealed the existence of four types of conformers differing in the orientation of the isopropyl and hydroxyl groups. Thymol monomers were isolated in noble gas (Ar and Xe) matrices (at 15 K) and characterized by IR spectroscopy. With the support of B3LYP harmonic vibrational calculations, the two most stable trans-OH-conformers, differing in the isopropyl orientation, were identified in the cryomatrices. The two less stable cis-OH conformers were not detected as they shall undergo fast tunneling to the most stable ones. Annealing experiments in a Xe matrix up to 75 K did not lead to any conversion between the two isolated conformers, which is in accordance with the significative energy barrier computed for rotamerization of the bulky isopropyl group (~24 kJ mol−1). Vibrational excitation promoted by broadband or by narrowband irradiation, at the 2ν(OH) frequencies of the isolated conformers, did not lead to any conversion either, which was interpreted in terms of a more efficient energy transfer to the hydroxyl rotamerization (associated with a lower energy barrier and a light H-atom) than to the isopropyl rotamerization coordinate. Broadband UV irradiation experiments (λ > 200 nm) led to a prompt transformation of matrix isolated thymol, with spectroscopic evidence suggesting the formation of isomeric alkyl-substituted cyclohexadienones, Dewar isomers and open-chain conjugated ketenes. The photochemical mechanism interpretation concords with that reported for analogous phenol derivatives.Multidisciplinary Digital Publishing Institute2022-06-07info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/101246http://hdl.handle.net/10316/101246https://doi.org/10.3390/photochem2020028eng2673-7256https://doi.org/10.3390/photochem2020028Jesus, A. J. LopesNunes, Cláudio ManaiaReva, Igorinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-08-17T23:02:26Zoai:estudogeral.uc.pt:10316/101246Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:18:28.726496Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices
title Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices
spellingShingle Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices
Jesus, A. J. Lopes
title_short Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices
title_full Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices
title_fullStr Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices
title_full_unstemmed Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices
title_sort Conformational Structure, Infrared Spectra and Light-Induced Transformations of Thymol Isolated in Noble Gas Cryomatrices
author Jesus, A. J. Lopes
author_facet Jesus, A. J. Lopes
Nunes, Cláudio Manaia
Reva, Igor
author_role author
author2 Nunes, Cláudio Manaia
Reva, Igor
author2_role author
author
dc.contributor.author.fl_str_mv Jesus, A. J. Lopes
Nunes, Cláudio Manaia
Reva, Igor
description The conformational space of the natural product thymol (2-isopropyl-5-methylphenol) was investigated using quantum chemical calculations at the B3LYP and MP2 levels, which revealed the existence of four types of conformers differing in the orientation of the isopropyl and hydroxyl groups. Thymol monomers were isolated in noble gas (Ar and Xe) matrices (at 15 K) and characterized by IR spectroscopy. With the support of B3LYP harmonic vibrational calculations, the two most stable trans-OH-conformers, differing in the isopropyl orientation, were identified in the cryomatrices. The two less stable cis-OH conformers were not detected as they shall undergo fast tunneling to the most stable ones. Annealing experiments in a Xe matrix up to 75 K did not lead to any conversion between the two isolated conformers, which is in accordance with the significative energy barrier computed for rotamerization of the bulky isopropyl group (~24 kJ mol−1). Vibrational excitation promoted by broadband or by narrowband irradiation, at the 2ν(OH) frequencies of the isolated conformers, did not lead to any conversion either, which was interpreted in terms of a more efficient energy transfer to the hydroxyl rotamerization (associated with a lower energy barrier and a light H-atom) than to the isopropyl rotamerization coordinate. Broadband UV irradiation experiments (λ > 200 nm) led to a prompt transformation of matrix isolated thymol, with spectroscopic evidence suggesting the formation of isomeric alkyl-substituted cyclohexadienones, Dewar isomers and open-chain conjugated ketenes. The photochemical mechanism interpretation concords with that reported for analogous phenol derivatives.
publishDate 2022
dc.date.none.fl_str_mv 2022-06-07
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/101246
http://hdl.handle.net/10316/101246
https://doi.org/10.3390/photochem2020028
url http://hdl.handle.net/10316/101246
https://doi.org/10.3390/photochem2020028
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https://doi.org/10.3390/photochem2020028
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