Mass spectrometry-based methodologies for targeted and untargeted identification of protein covalent adducts (Adductomics)
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , |
Tipo de documento: | Outros |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | https://doi.org/10.3390/ht8020009 |
Resumo: | Protein covalent adducts formed upon exposure to reactive (mainly electrophilic) chemicals may lead to the development of a wide range of deleterious health outcomes. Therefore, the identification of protein covalent adducts constitutes a huge opportunity for a better understanding of events underlying diseases and for the development of biomarkers which may constitute effective tools for disease diagnosis/prognosis, for the application of personalized medicine approaches and for accurately assessing human exposure to chemical toxicants. The currently available mass spectrometry (MS)-based methodologies, are clearly the most suitable for the analysis of protein covalent modifications, providing accuracy, sensitivity, unbiased identification of the modified residue and conjugates along with quantitative information. However, despite the huge technological advances in MS instrumentation and bioinformatics tools, the identification of low abundant protein covalent adducts is still challenging. This review is aimed at summarizing the MS-based methodologies currently used for the identification of protein covalent adducts and the strategies developed to overcome the analytical challenges, involving not only sample pre-treatment procedures but also distinct MS and data analysis approaches. |
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Mass spectrometry-based methodologies for targeted and untargeted identification of protein covalent adducts (Adductomics)Current status and challengesAdductomicsMass spectrometryProtein covalent adductsBiotechnologyBioengineeringBiochemistryBiomedical EngineeringSDG 3 - Good Health and Well-beingProtein covalent adducts formed upon exposure to reactive (mainly electrophilic) chemicals may lead to the development of a wide range of deleterious health outcomes. Therefore, the identification of protein covalent adducts constitutes a huge opportunity for a better understanding of events underlying diseases and for the development of biomarkers which may constitute effective tools for disease diagnosis/prognosis, for the application of personalized medicine approaches and for accurately assessing human exposure to chemical toxicants. The currently available mass spectrometry (MS)-based methodologies, are clearly the most suitable for the analysis of protein covalent modifications, providing accuracy, sensitivity, unbiased identification of the modified residue and conjugates along with quantitative information. However, despite the huge technological advances in MS instrumentation and bioinformatics tools, the identification of low abundant protein covalent adducts is still challenging. This review is aimed at summarizing the MS-based methodologies currently used for the identification of protein covalent adducts and the strategies developed to overcome the analytical challenges, involving not only sample pre-treatment procedures but also distinct MS and data analysis approaches.NOVA Medical School|Faculdade de Ciências Médicas (NMS|FCM)Centro de Estudos de Doenças Crónicas (CEDOC)RUNNunes, JoãoCharneira, CatarinaMorello, JuditRodrigues, JoãoPereira, Sofia A.Antunes, Alexandra M.M.2019-07-26T22:41:56Z2019-06-012019-06-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/otherapplication/pdfhttps://doi.org/10.3390/ht8020009eng2571-5135PURE: 13973146http://www.scopus.com/inward/record.url?scp=85067859448&partnerID=8YFLogxKhttps://doi.org/10.3390/ht8020009info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-05-22T17:40:28Zoai:run.unl.pt:10362/76648Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-05-22T17:40:28Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Mass spectrometry-based methodologies for targeted and untargeted identification of protein covalent adducts (Adductomics) Current status and challenges |
title |
Mass spectrometry-based methodologies for targeted and untargeted identification of protein covalent adducts (Adductomics) |
spellingShingle |
Mass spectrometry-based methodologies for targeted and untargeted identification of protein covalent adducts (Adductomics) Nunes, João Adductomics Mass spectrometry Protein covalent adducts Biotechnology Bioengineering Biochemistry Biomedical Engineering SDG 3 - Good Health and Well-being |
title_short |
Mass spectrometry-based methodologies for targeted and untargeted identification of protein covalent adducts (Adductomics) |
title_full |
Mass spectrometry-based methodologies for targeted and untargeted identification of protein covalent adducts (Adductomics) |
title_fullStr |
Mass spectrometry-based methodologies for targeted and untargeted identification of protein covalent adducts (Adductomics) |
title_full_unstemmed |
Mass spectrometry-based methodologies for targeted and untargeted identification of protein covalent adducts (Adductomics) |
title_sort |
Mass spectrometry-based methodologies for targeted and untargeted identification of protein covalent adducts (Adductomics) |
author |
Nunes, João |
author_facet |
Nunes, João Charneira, Catarina Morello, Judit Rodrigues, João Pereira, Sofia A. Antunes, Alexandra M.M. |
author_role |
author |
author2 |
Charneira, Catarina Morello, Judit Rodrigues, João Pereira, Sofia A. Antunes, Alexandra M.M. |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
NOVA Medical School|Faculdade de Ciências Médicas (NMS|FCM) Centro de Estudos de Doenças Crónicas (CEDOC) RUN |
dc.contributor.author.fl_str_mv |
Nunes, João Charneira, Catarina Morello, Judit Rodrigues, João Pereira, Sofia A. Antunes, Alexandra M.M. |
dc.subject.por.fl_str_mv |
Adductomics Mass spectrometry Protein covalent adducts Biotechnology Bioengineering Biochemistry Biomedical Engineering SDG 3 - Good Health and Well-being |
topic |
Adductomics Mass spectrometry Protein covalent adducts Biotechnology Bioengineering Biochemistry Biomedical Engineering SDG 3 - Good Health and Well-being |
description |
Protein covalent adducts formed upon exposure to reactive (mainly electrophilic) chemicals may lead to the development of a wide range of deleterious health outcomes. Therefore, the identification of protein covalent adducts constitutes a huge opportunity for a better understanding of events underlying diseases and for the development of biomarkers which may constitute effective tools for disease diagnosis/prognosis, for the application of personalized medicine approaches and for accurately assessing human exposure to chemical toxicants. The currently available mass spectrometry (MS)-based methodologies, are clearly the most suitable for the analysis of protein covalent modifications, providing accuracy, sensitivity, unbiased identification of the modified residue and conjugates along with quantitative information. However, despite the huge technological advances in MS instrumentation and bioinformatics tools, the identification of low abundant protein covalent adducts is still challenging. This review is aimed at summarizing the MS-based methodologies currently used for the identification of protein covalent adducts and the strategies developed to overcome the analytical challenges, involving not only sample pre-treatment procedures but also distinct MS and data analysis approaches. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-07-26T22:41:56Z 2019-06-01 2019-06-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/other |
format |
other |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://doi.org/10.3390/ht8020009 |
url |
https://doi.org/10.3390/ht8020009 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
2571-5135 PURE: 13973146 http://www.scopus.com/inward/record.url?scp=85067859448&partnerID=8YFLogxK https://doi.org/10.3390/ht8020009 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
mluisa.alvim@gmail.com |
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1817545703138787328 |