Chemical engineered extracts of Portuguese biorenewable resources to the synthesis of diverse natural products hybrids towards new bioactive entities
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Tipo de documento: | Dissertação |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10362/158350 |
Resumo: | Natural products (NPs) with biologically active pharmacophores are biologically validated starting points for the development of new drugs. Between 1981 and 2019, NPs and their derivatives represented 24% of all newly approved drugs. Cistus ladanifer is an aromatic plant from Mediterranean climates that exist in high quantity in Portugal. Cistus ladanifer essential oils have shown antimicrobial and antitumoral biological activities. An interesting methodology to access NPs derivatives is the preparation of chemically engineered extracts (CEEs). This approach focuses on the transformation of selected chemical functionalities, highly common in natural products extracts, into new chemical entities. This work aims to develop a new and efficient methodology to prepare CEEs from Cistus ladanifer. To this end, light-mediated thiol-ene reaction, was applied to natural extracts of Cistus ladanifer, to took advantage of alkene functional groups and form thioether-CEEs. The optimization of the reaction conditions was executed using limonene as model substrate (3 equiv. of N-acetylcysteine, 0.1 equiv. of DMPA, dry MeOH, 2.2 M limonene, for 1h at 365 nm in a FEP Tube). The optimized reaction conditions were applied to a basic fraction of the natural extract of Cistus ladanifer, however further optimization was needed. Cistus ladanifer profile was studied through UPLC/ESI-HR-MS and two approaches were used for the purification of the new CEEs. (i) Flash chromatography, where the best protocol was based in an initial MTBE acid/basic workup followed by 2 consecutives normal phase column chromatography’s (ii) semi-preparative HPLC that allowed the identification of 3 Peaks at 254 nm. The m/z identified correspond to 33 possible compounds in peak 1, 19 in peak 2, and 37 in peak 3. The main compound of the acid fraction of Cistus ladanifer, labdanolic acid, was also studied. A methylation reaction followed by a dehydration allowed the introduction of alkenes in the molecule making it susceptible to thiol-ene reaction. Unfortunately, no conversion was obtained. |
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Chemical engineered extracts of Portuguese biorenewable resources to the synthesis of diverse natural products hybrids towards new bioactive entitiesNatural productsThiol-eneCistus ladaniferlabdanolic AcidDomínio/Área Científica::Engenharia e Tecnologia::Engenharia QuímicaNatural products (NPs) with biologically active pharmacophores are biologically validated starting points for the development of new drugs. Between 1981 and 2019, NPs and their derivatives represented 24% of all newly approved drugs. Cistus ladanifer is an aromatic plant from Mediterranean climates that exist in high quantity in Portugal. Cistus ladanifer essential oils have shown antimicrobial and antitumoral biological activities. An interesting methodology to access NPs derivatives is the preparation of chemically engineered extracts (CEEs). This approach focuses on the transformation of selected chemical functionalities, highly common in natural products extracts, into new chemical entities. This work aims to develop a new and efficient methodology to prepare CEEs from Cistus ladanifer. To this end, light-mediated thiol-ene reaction, was applied to natural extracts of Cistus ladanifer, to took advantage of alkene functional groups and form thioether-CEEs. The optimization of the reaction conditions was executed using limonene as model substrate (3 equiv. of N-acetylcysteine, 0.1 equiv. of DMPA, dry MeOH, 2.2 M limonene, for 1h at 365 nm in a FEP Tube). The optimized reaction conditions were applied to a basic fraction of the natural extract of Cistus ladanifer, however further optimization was needed. Cistus ladanifer profile was studied through UPLC/ESI-HR-MS and two approaches were used for the purification of the new CEEs. (i) Flash chromatography, where the best protocol was based in an initial MTBE acid/basic workup followed by 2 consecutives normal phase column chromatography’s (ii) semi-preparative HPLC that allowed the identification of 3 Peaks at 254 nm. The m/z identified correspond to 33 possible compounds in peak 1, 19 in peak 2, and 37 in peak 3. The main compound of the acid fraction of Cistus ladanifer, labdanolic acid, was also studied. A methylation reaction followed by a dehydration allowed the introduction of alkenes in the molecule making it susceptible to thiol-ene reaction. Unfortunately, no conversion was obtained.Produtos naturais (NPs) com farmacóforos biologicamente ativos são pontos de partida interessantes para o desenvolvimento de novos fármacos. Entre 1981-2019, os NPs e derivados representam cerca de 24% de todos os novos fármacos aprovados. Cistus ladanifer é uma planta aromática que existe em alta quantidade em Portugal e que pode ser encontrada em climas mediterrâneos. Diversos estudos demonstram o seu alto potencial antimicrobiano e antitumoral. Uma metodologia interessante para aceder a derivados de NPs é a preparação de extratos quimicamente modificados (CEEs). Esta abordagem permite a transformação de determinadas funcionalidades químicas, altamente comuns, em extratos naturais. O objetivo principal deste trabalho é de desenvolver uma nova metodologia eficiente que permita preparar CEEs a partir de um extrato de Cistus ladanifer. Reações tiol-ene mediadas pela luz UV foram aplicadas a este extrato, tirando partido de olefinas presentes, formando novas ligações tioeter-CEEs. As otimizações das condições reacionais foram executadas usando limoneno como substrato modelo (3 equiv. N-acetilcisteína, 0.1 equiv. DMPA, MeOH, 2.2 M limoneno e luz UV a 365 nm num tubo FEP durante 1 h). As condições otimizadas foram aplicadas à fração básica do extrato de Cistus ladanifer, seguido de nova otimização. O perfil da Cistus ladanifer foi estudado por UPLC/ESI-HR-MS e foram utilizadas duas abordagens para purificar os novos CEEs: (i) Cromatografia Flash, onde o melhor protocolo utilizado foi baseado num workup ácido/base inicial com MTBE, seguido de duas cromatografias em coluna consecutivas (ii) HPLC Semi-Preparativo, que permitiu a identificação de três novas bandas a 254 nm. As m/z identificadas podem ser atribuídas a 33 possíveis compostos na banda 1, 19 na banda 2 e 27 na banda 3. O composto maioritário da fração ácida da Cistus ladanifer, Ácido Labdanólico, foi também estudado. A esterificação e seguida desidratação deste composto permitiu a introdução de uma olefina na molécula que pode sofrer reação tiol-ene. Infelizmente nenhuma conversão foi obtida.Siopa, FilipaAfonso, CarlosRUNNunes, Gonçalo Bernardo Fidalgo2023-09-27T15:18:08Z2022-112022-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10362/158350enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T05:40:42Zoai:run.unl.pt:10362/158350Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:57:05.711171Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Chemical engineered extracts of Portuguese biorenewable resources to the synthesis of diverse natural products hybrids towards new bioactive entities |
title |
Chemical engineered extracts of Portuguese biorenewable resources to the synthesis of diverse natural products hybrids towards new bioactive entities |
spellingShingle |
Chemical engineered extracts of Portuguese biorenewable resources to the synthesis of diverse natural products hybrids towards new bioactive entities Nunes, Gonçalo Bernardo Fidalgo Natural products Thiol-ene Cistus ladanifer labdanolic Acid Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química |
title_short |
Chemical engineered extracts of Portuguese biorenewable resources to the synthesis of diverse natural products hybrids towards new bioactive entities |
title_full |
Chemical engineered extracts of Portuguese biorenewable resources to the synthesis of diverse natural products hybrids towards new bioactive entities |
title_fullStr |
Chemical engineered extracts of Portuguese biorenewable resources to the synthesis of diverse natural products hybrids towards new bioactive entities |
title_full_unstemmed |
Chemical engineered extracts of Portuguese biorenewable resources to the synthesis of diverse natural products hybrids towards new bioactive entities |
title_sort |
Chemical engineered extracts of Portuguese biorenewable resources to the synthesis of diverse natural products hybrids towards new bioactive entities |
author |
Nunes, Gonçalo Bernardo Fidalgo |
author_facet |
Nunes, Gonçalo Bernardo Fidalgo |
author_role |
author |
dc.contributor.none.fl_str_mv |
Siopa, Filipa Afonso, Carlos RUN |
dc.contributor.author.fl_str_mv |
Nunes, Gonçalo Bernardo Fidalgo |
dc.subject.por.fl_str_mv |
Natural products Thiol-ene Cistus ladanifer labdanolic Acid Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química |
topic |
Natural products Thiol-ene Cistus ladanifer labdanolic Acid Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química |
description |
Natural products (NPs) with biologically active pharmacophores are biologically validated starting points for the development of new drugs. Between 1981 and 2019, NPs and their derivatives represented 24% of all newly approved drugs. Cistus ladanifer is an aromatic plant from Mediterranean climates that exist in high quantity in Portugal. Cistus ladanifer essential oils have shown antimicrobial and antitumoral biological activities. An interesting methodology to access NPs derivatives is the preparation of chemically engineered extracts (CEEs). This approach focuses on the transformation of selected chemical functionalities, highly common in natural products extracts, into new chemical entities. This work aims to develop a new and efficient methodology to prepare CEEs from Cistus ladanifer. To this end, light-mediated thiol-ene reaction, was applied to natural extracts of Cistus ladanifer, to took advantage of alkene functional groups and form thioether-CEEs. The optimization of the reaction conditions was executed using limonene as model substrate (3 equiv. of N-acetylcysteine, 0.1 equiv. of DMPA, dry MeOH, 2.2 M limonene, for 1h at 365 nm in a FEP Tube). The optimized reaction conditions were applied to a basic fraction of the natural extract of Cistus ladanifer, however further optimization was needed. Cistus ladanifer profile was studied through UPLC/ESI-HR-MS and two approaches were used for the purification of the new CEEs. (i) Flash chromatography, where the best protocol was based in an initial MTBE acid/basic workup followed by 2 consecutives normal phase column chromatography’s (ii) semi-preparative HPLC that allowed the identification of 3 Peaks at 254 nm. The m/z identified correspond to 33 possible compounds in peak 1, 19 in peak 2, and 37 in peak 3. The main compound of the acid fraction of Cistus ladanifer, labdanolic acid, was also studied. A methylation reaction followed by a dehydration allowed the introduction of alkenes in the molecule making it susceptible to thiol-ene reaction. Unfortunately, no conversion was obtained. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-11 2022-11-01T00:00:00Z 2023-09-27T15:18:08Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10362/158350 |
url |
http://hdl.handle.net/10362/158350 |
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eng |
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eng |
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info:eu-repo/semantics/openAccess |
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openAccess |
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application/pdf |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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