Identification of colorectal cancer associated biomarkers: an integrated analysis of miRNA expression
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10316/103554 https://doi.org/10.18632/aging.203556 |
Resumo: | Colorectal cancer is one of the leading causes of cancer-related deaths worldwide. This complex disease still holds severe problems concerning diagnosis due to the high invasiveness nature of colonoscopy and the low accuracy of the alternative diagnostic methods. Additionally, patient heterogeneity even within the same stage is not properly reflected in the current stratification system. This scenario highlights the need for new biomarkers to improve non-invasive screenings and clinical management of patients. MicroRNAs (miRNAs) have emerged as good candidate biomarkers in cancer as they are stable molecules, easily measurable and detected in body fluids thus allowing for non-invasive diagnosis and/or prognosis. In this study, we performed an integrated analysis first using 4 different datasets (discovery cohorts) to identify miRNAs associated with colorectal cancer development, unveil their role in this disease by identifying putative targets and regulatory networks and investigate their ability to serve as biomarkers. We have identified 26 differentially expressed miRNAs which interact with frequently deregulated genes known to participate in commonly altered pathways in colorectal cancer. Most of these miRNAs have high diagnostic power, and their prognostic potential is evidenced by panels of 5 miRNAs able to predict the outcome of stage II and III colorectal cancer patients. Notably, 8 miRNAs were validated in three additional independent cohorts (validation cohorts) including a plasma cohort thus reinforcing the value of miRNAs as non-invasive biomarkers. |
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Identification of colorectal cancer associated biomarkers: an integrated analysis of miRNA expressionmicroRNAsbiomarkercolorectal cancerdiagnosisprognosisAdultAgedBiomarkers, TumorColorectal NeoplasmsFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleMicroRNAsMiddle AgedColorectal cancer is one of the leading causes of cancer-related deaths worldwide. This complex disease still holds severe problems concerning diagnosis due to the high invasiveness nature of colonoscopy and the low accuracy of the alternative diagnostic methods. Additionally, patient heterogeneity even within the same stage is not properly reflected in the current stratification system. This scenario highlights the need for new biomarkers to improve non-invasive screenings and clinical management of patients. MicroRNAs (miRNAs) have emerged as good candidate biomarkers in cancer as they are stable molecules, easily measurable and detected in body fluids thus allowing for non-invasive diagnosis and/or prognosis. In this study, we performed an integrated analysis first using 4 different datasets (discovery cohorts) to identify miRNAs associated with colorectal cancer development, unveil their role in this disease by identifying putative targets and regulatory networks and investigate their ability to serve as biomarkers. We have identified 26 differentially expressed miRNAs which interact with frequently deregulated genes known to participate in commonly altered pathways in colorectal cancer. Most of these miRNAs have high diagnostic power, and their prognostic potential is evidenced by panels of 5 miRNAs able to predict the outcome of stage II and III colorectal cancer patients. Notably, 8 miRNAs were validated in three additional independent cohorts (validation cohorts) including a plasma cohort thus reinforcing the value of miRNAs as non-invasive biomarkers.Impact Journals LLC2021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/103554http://hdl.handle.net/10316/103554https://doi.org/10.18632/aging.203556eng1945-4589Fonseca, AndréRamalhete, Sara VenturaMestre, AndréNeves, Ricardo Pires dasMarreiros, AnaCastelo Branco, PedroRoberto, Vânia Palmainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-19T21:34:12Zoai:estudogeral.uc.pt:10316/103554Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:20:22.388531Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Identification of colorectal cancer associated biomarkers: an integrated analysis of miRNA expression |
title |
Identification of colorectal cancer associated biomarkers: an integrated analysis of miRNA expression |
spellingShingle |
Identification of colorectal cancer associated biomarkers: an integrated analysis of miRNA expression Fonseca, André microRNAs biomarker colorectal cancer diagnosis prognosis Adult Aged Biomarkers, Tumor Colorectal Neoplasms Female Gene Expression Profiling Gene Expression Regulation, Neoplastic Humans Male MicroRNAs Middle Aged |
title_short |
Identification of colorectal cancer associated biomarkers: an integrated analysis of miRNA expression |
title_full |
Identification of colorectal cancer associated biomarkers: an integrated analysis of miRNA expression |
title_fullStr |
Identification of colorectal cancer associated biomarkers: an integrated analysis of miRNA expression |
title_full_unstemmed |
Identification of colorectal cancer associated biomarkers: an integrated analysis of miRNA expression |
title_sort |
Identification of colorectal cancer associated biomarkers: an integrated analysis of miRNA expression |
author |
Fonseca, André |
author_facet |
Fonseca, André Ramalhete, Sara Ventura Mestre, André Neves, Ricardo Pires das Marreiros, Ana Castelo Branco, Pedro Roberto, Vânia Palma |
author_role |
author |
author2 |
Ramalhete, Sara Ventura Mestre, André Neves, Ricardo Pires das Marreiros, Ana Castelo Branco, Pedro Roberto, Vânia Palma |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Fonseca, André Ramalhete, Sara Ventura Mestre, André Neves, Ricardo Pires das Marreiros, Ana Castelo Branco, Pedro Roberto, Vânia Palma |
dc.subject.por.fl_str_mv |
microRNAs biomarker colorectal cancer diagnosis prognosis Adult Aged Biomarkers, Tumor Colorectal Neoplasms Female Gene Expression Profiling Gene Expression Regulation, Neoplastic Humans Male MicroRNAs Middle Aged |
topic |
microRNAs biomarker colorectal cancer diagnosis prognosis Adult Aged Biomarkers, Tumor Colorectal Neoplasms Female Gene Expression Profiling Gene Expression Regulation, Neoplastic Humans Male MicroRNAs Middle Aged |
description |
Colorectal cancer is one of the leading causes of cancer-related deaths worldwide. This complex disease still holds severe problems concerning diagnosis due to the high invasiveness nature of colonoscopy and the low accuracy of the alternative diagnostic methods. Additionally, patient heterogeneity even within the same stage is not properly reflected in the current stratification system. This scenario highlights the need for new biomarkers to improve non-invasive screenings and clinical management of patients. MicroRNAs (miRNAs) have emerged as good candidate biomarkers in cancer as they are stable molecules, easily measurable and detected in body fluids thus allowing for non-invasive diagnosis and/or prognosis. In this study, we performed an integrated analysis first using 4 different datasets (discovery cohorts) to identify miRNAs associated with colorectal cancer development, unveil their role in this disease by identifying putative targets and regulatory networks and investigate their ability to serve as biomarkers. We have identified 26 differentially expressed miRNAs which interact with frequently deregulated genes known to participate in commonly altered pathways in colorectal cancer. Most of these miRNAs have high diagnostic power, and their prognostic potential is evidenced by panels of 5 miRNAs able to predict the outcome of stage II and III colorectal cancer patients. Notably, 8 miRNAs were validated in three additional independent cohorts (validation cohorts) including a plasma cohort thus reinforcing the value of miRNAs as non-invasive biomarkers. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10316/103554 http://hdl.handle.net/10316/103554 https://doi.org/10.18632/aging.203556 |
url |
http://hdl.handle.net/10316/103554 https://doi.org/10.18632/aging.203556 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
1945-4589 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Impact Journals LLC |
publisher.none.fl_str_mv |
Impact Journals LLC |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1817550941343186944 |