Habitat continuity and geographic distance predict population genetic differentiation in giant kelp

Detalhes bibliográficos
Autor(a) principal: Filipe, A.
Data de Publicação: 2010
Outros Autores: Raimondi, P. T., Reed, D. C., Coelho, Nelson, Raphael, L., Allison, W., Serrão, Ester
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/4042
Resumo: Isolation by distance (IBD) models are widely used to predict levels of genetic connectivity as a function of Euclidean distance, and although recent studies have used GIS-landscape ecological approaches to improve the predictability of spatial genetic structure, few if any have addressed the effect of habitat continuity on gene flow. Landscape effects on genetic connectivity are even less understood in marine populations, where habitat mapping is particularly challenging. In this study, we model spatial genetic structure of a habitat-structuring species, the giant kelp Macrocystis pyrifera, using highly variable microsatellite markers. GIS mapping was used to characterize habitat continuity and distance between sampling sites along the mainland coast of the Santa Barbara Channel, and their roles as predictors of genetic differentiation were evaluated. Mean dispersal distance (σ) and effective population size (Ne) were estimated by comparing our IBD slope with those from simulations incorporating habitat continuity and spore dispersal characteristics of the study area. We found an allelic richness of 7–50 alleles/locus, which to our knowledge is the highest reported for macroalgae. The best regression model relating genetic distance to habitat variables included both geographic distance and habitat continuity, which were respectively, positively and negatively related to genetic distance. Our results provide strong support for a dependence of gene flow on both distance and habitat continuity and elucidate the combination of Ne and σ that explained genetic differentiation.
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spelling Habitat continuity and geographic distance predict population genetic differentiation in giant kelpConnectivityEffective population sizeGISIsolation by distanceMacrocystis pyriferaMarine dispersalIsolation by distance (IBD) models are widely used to predict levels of genetic connectivity as a function of Euclidean distance, and although recent studies have used GIS-landscape ecological approaches to improve the predictability of spatial genetic structure, few if any have addressed the effect of habitat continuity on gene flow. Landscape effects on genetic connectivity are even less understood in marine populations, where habitat mapping is particularly challenging. In this study, we model spatial genetic structure of a habitat-structuring species, the giant kelp Macrocystis pyrifera, using highly variable microsatellite markers. GIS mapping was used to characterize habitat continuity and distance between sampling sites along the mainland coast of the Santa Barbara Channel, and their roles as predictors of genetic differentiation were evaluated. Mean dispersal distance (σ) and effective population size (Ne) were estimated by comparing our IBD slope with those from simulations incorporating habitat continuity and spore dispersal characteristics of the study area. We found an allelic richness of 7–50 alleles/locus, which to our knowledge is the highest reported for macroalgae. The best regression model relating genetic distance to habitat variables included both geographic distance and habitat continuity, which were respectively, positively and negatively related to genetic distance. Our results provide strong support for a dependence of gene flow on both distance and habitat continuity and elucidate the combination of Ne and σ that explained genetic differentiation.Ecological Society of AmericaSapientiaFilipe, A.Raimondi, P. T.Reed, D. C.Coelho, NelsonRaphael, L.Allison, W.Serrão, Ester2014-05-23T12:01:52Z20102014-05-21T13:18:11Z2010-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/4042engFilipe, A.; Raimondi, P.T.; Reed, D.C.; Coelho, N.C.; Raphael, L.; Allison, W.; Serrão, E.A.Habitat continuity and geographic distance predict population genetic differentiation in giant kelp, Ecology, 91, 1, 49-56, 2010.0012-9658AUT: ESE00527;http://dx.doi.org/ 10.1890/09-0050.1info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:15:13Zoai:sapientia.ualg.pt:10400.1/4042Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:57:30.931379Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Habitat continuity and geographic distance predict population genetic differentiation in giant kelp
title Habitat continuity and geographic distance predict population genetic differentiation in giant kelp
spellingShingle Habitat continuity and geographic distance predict population genetic differentiation in giant kelp
Filipe, A.
Connectivity
Effective population size
GIS
Isolation by distance
Macrocystis pyrifera
Marine dispersal
title_short Habitat continuity and geographic distance predict population genetic differentiation in giant kelp
title_full Habitat continuity and geographic distance predict population genetic differentiation in giant kelp
title_fullStr Habitat continuity and geographic distance predict population genetic differentiation in giant kelp
title_full_unstemmed Habitat continuity and geographic distance predict population genetic differentiation in giant kelp
title_sort Habitat continuity and geographic distance predict population genetic differentiation in giant kelp
author Filipe, A.
author_facet Filipe, A.
Raimondi, P. T.
Reed, D. C.
Coelho, Nelson
Raphael, L.
Allison, W.
Serrão, Ester
author_role author
author2 Raimondi, P. T.
Reed, D. C.
Coelho, Nelson
Raphael, L.
Allison, W.
Serrão, Ester
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Filipe, A.
Raimondi, P. T.
Reed, D. C.
Coelho, Nelson
Raphael, L.
Allison, W.
Serrão, Ester
dc.subject.por.fl_str_mv Connectivity
Effective population size
GIS
Isolation by distance
Macrocystis pyrifera
Marine dispersal
topic Connectivity
Effective population size
GIS
Isolation by distance
Macrocystis pyrifera
Marine dispersal
description Isolation by distance (IBD) models are widely used to predict levels of genetic connectivity as a function of Euclidean distance, and although recent studies have used GIS-landscape ecological approaches to improve the predictability of spatial genetic structure, few if any have addressed the effect of habitat continuity on gene flow. Landscape effects on genetic connectivity are even less understood in marine populations, where habitat mapping is particularly challenging. In this study, we model spatial genetic structure of a habitat-structuring species, the giant kelp Macrocystis pyrifera, using highly variable microsatellite markers. GIS mapping was used to characterize habitat continuity and distance between sampling sites along the mainland coast of the Santa Barbara Channel, and their roles as predictors of genetic differentiation were evaluated. Mean dispersal distance (σ) and effective population size (Ne) were estimated by comparing our IBD slope with those from simulations incorporating habitat continuity and spore dispersal characteristics of the study area. We found an allelic richness of 7–50 alleles/locus, which to our knowledge is the highest reported for macroalgae. The best regression model relating genetic distance to habitat variables included both geographic distance and habitat continuity, which were respectively, positively and negatively related to genetic distance. Our results provide strong support for a dependence of gene flow on both distance and habitat continuity and elucidate the combination of Ne and σ that explained genetic differentiation.
publishDate 2010
dc.date.none.fl_str_mv 2010
2010-01-01T00:00:00Z
2014-05-23T12:01:52Z
2014-05-21T13:18:11Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/4042
url http://hdl.handle.net/10400.1/4042
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Filipe, A.; Raimondi, P.T.; Reed, D.C.; Coelho, N.C.; Raphael, L.; Allison, W.; Serrão, E.A.Habitat continuity and geographic distance predict population genetic differentiation in giant kelp, Ecology, 91, 1, 49-56, 2010.
0012-9658
AUT: ESE00527;
http://dx.doi.org/ 10.1890/09-0050.1
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Ecological Society of America
publisher.none.fl_str_mv Ecological Society of America
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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