Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of γ-lactones
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/1822/60401 |
Resumo: | Background Lactones are highly valuable cyclic esters of hydroxy fatty acids that find application as pure fragrances or as building blocks of speciality chemicals. While chemical synthesis often leads to undesired racemic mixtures, microbial production allows obtaining optically pure lactones. The production of a specific lactone by biotransformation depends on the supply of the corresponding hydroxy fatty acid, which has economic and industrial value similar to γ-lactones. Hence, the identification and exploration of microorganisms with the rare natural ability for de novo biosynthesis of lactones will contribute to the long-term sustainability of microbial production. In this study, the innate ability of Ashbya gossypii for de novo production of γ-lactones from glucose was evaluated and improved. Results Characterization of the volatile organic compounds produced by nine strains of this industrial filamentous fungus in glucose-based medium revealed the noteworthy presence of seven chemically different γ-lactones. To decipher and understand the de novo biosynthesis of γ-lactones from glucose, we developed metabolic engineering strategies focused on the fatty acid biosynthesis and the β-oxidation pathways. Overexpression of AgDES589, encoding a desaturase for the conversion of oleic acid (C18:1) into linoleic acid (C18:2), and deletion of AgELO624, which encodes an elongase that catalyses the formation of C20:0 and C22:0 fatty acids, greatly increased the production of γ-lactones (up to 6.4-fold; (7.6 ± 0.8) × 103 µg/gCell Dry Weight). Further substitution of AgPOX1, encoding the exclusive acyl-CoA oxidase in A. gossypii, by a codon-optimized POX2 gene from Yarrowia lipolytica, which encodes a specific long chain acyl-CoA oxidase, fine-tuned the biosynthesis of γ-decalactone to a relative production of more than 99%. Conclusions This study demonstrates the potential of A. gossypii as a model and future platform for de novo biosynthesis of γ-lactones. By means of metabolic engineering, key enzymatic steps involved in their production were elucidated. Moreover, the combinatorial metabolic engineering strategies developed resulted in improved de novo biosynthesis of γ-decalactone. In sum, these proof-of-concept data revealed yet unknown metabolic and genetic determinants important for the future exploration of the de novo production of γ-lactones as an alternative to biotransformation processes. |
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Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of γ-lactonesVolatile organic compoundsγ-LactonesAshbya gossypiDe novo biosynthesisMetabolic engineeringFatty acid biosynthesisß-Oxidationgamma-LactonesAshbya gossypiiβ-OxidationScience & TechnologyBackground Lactones are highly valuable cyclic esters of hydroxy fatty acids that find application as pure fragrances or as building blocks of speciality chemicals. While chemical synthesis often leads to undesired racemic mixtures, microbial production allows obtaining optically pure lactones. The production of a specific lactone by biotransformation depends on the supply of the corresponding hydroxy fatty acid, which has economic and industrial value similar to γ-lactones. Hence, the identification and exploration of microorganisms with the rare natural ability for de novo biosynthesis of lactones will contribute to the long-term sustainability of microbial production. In this study, the innate ability of Ashbya gossypii for de novo production of γ-lactones from glucose was evaluated and improved. Results Characterization of the volatile organic compounds produced by nine strains of this industrial filamentous fungus in glucose-based medium revealed the noteworthy presence of seven chemically different γ-lactones. To decipher and understand the de novo biosynthesis of γ-lactones from glucose, we developed metabolic engineering strategies focused on the fatty acid biosynthesis and the β-oxidation pathways. Overexpression of AgDES589, encoding a desaturase for the conversion of oleic acid (C18:1) into linoleic acid (C18:2), and deletion of AgELO624, which encodes an elongase that catalyses the formation of C20:0 and C22:0 fatty acids, greatly increased the production of γ-lactones (up to 6.4-fold; (7.6 ± 0.8) × 103 µg/gCell Dry Weight). Further substitution of AgPOX1, encoding the exclusive acyl-CoA oxidase in A. gossypii, by a codon-optimized POX2 gene from Yarrowia lipolytica, which encodes a specific long chain acyl-CoA oxidase, fine-tuned the biosynthesis of γ-decalactone to a relative production of more than 99%. Conclusions This study demonstrates the potential of A. gossypii as a model and future platform for de novo biosynthesis of γ-lactones. By means of metabolic engineering, key enzymatic steps involved in their production were elucidated. Moreover, the combinatorial metabolic engineering strategies developed resulted in improved de novo biosynthesis of γ-decalactone. In sum, these proof-of-concept data revealed yet unknown metabolic and genetic determinants important for the future exploration of the de novo production of γ-lactones as an alternative to biotransformation processes.This study was supported by: the Portuguese Foundation for Science and Technology (FCT) under the scope of the strategic funding of UID/BIO/04469/2019 unit and COMPETE 2020 (POCI-01-0145-FEDER-006684) (Post-Doc grant to T. Q. Aguiar and Ph.D. grant to E. Coelho), Ph.D. Grant PD/BD/113812/2015 to R. Silva (Doctoral Program in Applied and Environmental Microbiology), and BioTecNorte operation (NORTE-01-0145-FEDER-000004) funded by the European Regional Development Fund under the scope of Norte2020-Programa Operacional Regional do Norte; the Spanish Ministerio de Economía y Competitividad (BIO2014-56930-P and BIO2017-88435-R) and Junta de Castilla y León (SA016P17) to A. Jiménez and J.L. Revuelta.info:eu-repo/semantics/publishedVersionSpringer NatureUniversidade do MinhoSilva, RuiAguiar, Tatiana QuintaCoelho, EduardoJiménez, AlbertoRevuelta, José LuisDomingues, Lucília2019-122019-12-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/60401engSilva, Rui; Aguiar, Tatiana Q.; Coelho, Eduardo; Jiménez, Alberto; Revuelta, José Luis; Domingues, Lucília, Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of -lactones. Microbial Cell Factories, 18(62), 20191475-28591475-285910.1186/s12934-019-1113-130922300http://www.microbialcellfactories.com/info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:19:44Zoai:repositorium.sdum.uminho.pt:1822/60401Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:12:42.379578Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of γ-lactones |
title |
Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of γ-lactones |
spellingShingle |
Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of γ-lactones Silva, Rui Volatile organic compounds γ-Lactones Ashbya gossypi De novo biosynthesis Metabolic engineering Fatty acid biosynthesis ß-Oxidation gamma-Lactones Ashbya gossypii β-Oxidation Science & Technology |
title_short |
Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of γ-lactones |
title_full |
Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of γ-lactones |
title_fullStr |
Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of γ-lactones |
title_full_unstemmed |
Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of γ-lactones |
title_sort |
Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of γ-lactones |
author |
Silva, Rui |
author_facet |
Silva, Rui Aguiar, Tatiana Quinta Coelho, Eduardo Jiménez, Alberto Revuelta, José Luis Domingues, Lucília |
author_role |
author |
author2 |
Aguiar, Tatiana Quinta Coelho, Eduardo Jiménez, Alberto Revuelta, José Luis Domingues, Lucília |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Silva, Rui Aguiar, Tatiana Quinta Coelho, Eduardo Jiménez, Alberto Revuelta, José Luis Domingues, Lucília |
dc.subject.por.fl_str_mv |
Volatile organic compounds γ-Lactones Ashbya gossypi De novo biosynthesis Metabolic engineering Fatty acid biosynthesis ß-Oxidation gamma-Lactones Ashbya gossypii β-Oxidation Science & Technology |
topic |
Volatile organic compounds γ-Lactones Ashbya gossypi De novo biosynthesis Metabolic engineering Fatty acid biosynthesis ß-Oxidation gamma-Lactones Ashbya gossypii β-Oxidation Science & Technology |
description |
Background Lactones are highly valuable cyclic esters of hydroxy fatty acids that find application as pure fragrances or as building blocks of speciality chemicals. While chemical synthesis often leads to undesired racemic mixtures, microbial production allows obtaining optically pure lactones. The production of a specific lactone by biotransformation depends on the supply of the corresponding hydroxy fatty acid, which has economic and industrial value similar to γ-lactones. Hence, the identification and exploration of microorganisms with the rare natural ability for de novo biosynthesis of lactones will contribute to the long-term sustainability of microbial production. In this study, the innate ability of Ashbya gossypii for de novo production of γ-lactones from glucose was evaluated and improved. Results Characterization of the volatile organic compounds produced by nine strains of this industrial filamentous fungus in glucose-based medium revealed the noteworthy presence of seven chemically different γ-lactones. To decipher and understand the de novo biosynthesis of γ-lactones from glucose, we developed metabolic engineering strategies focused on the fatty acid biosynthesis and the β-oxidation pathways. Overexpression of AgDES589, encoding a desaturase for the conversion of oleic acid (C18:1) into linoleic acid (C18:2), and deletion of AgELO624, which encodes an elongase that catalyses the formation of C20:0 and C22:0 fatty acids, greatly increased the production of γ-lactones (up to 6.4-fold; (7.6 ± 0.8) × 103 µg/gCell Dry Weight). Further substitution of AgPOX1, encoding the exclusive acyl-CoA oxidase in A. gossypii, by a codon-optimized POX2 gene from Yarrowia lipolytica, which encodes a specific long chain acyl-CoA oxidase, fine-tuned the biosynthesis of γ-decalactone to a relative production of more than 99%. Conclusions This study demonstrates the potential of A. gossypii as a model and future platform for de novo biosynthesis of γ-lactones. By means of metabolic engineering, key enzymatic steps involved in their production were elucidated. Moreover, the combinatorial metabolic engineering strategies developed resulted in improved de novo biosynthesis of γ-decalactone. In sum, these proof-of-concept data revealed yet unknown metabolic and genetic determinants important for the future exploration of the de novo production of γ-lactones as an alternative to biotransformation processes. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-12 2019-12-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1822/60401 |
url |
http://hdl.handle.net/1822/60401 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Silva, Rui; Aguiar, Tatiana Q.; Coelho, Eduardo; Jiménez, Alberto; Revuelta, José Luis; Domingues, Lucília, Metabolic engineering of Ashbya gossypii for deciphering the de novo biosynthesis of -lactones. Microbial Cell Factories, 18(62), 2019 1475-2859 1475-2859 10.1186/s12934-019-1113-1 30922300 http://www.microbialcellfactories.com/ |
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info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Springer Nature |
publisher.none.fl_str_mv |
Springer Nature |
dc.source.none.fl_str_mv |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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