Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancer

Detalhes bibliográficos
Autor(a) principal: Lee, Donghyun D.
Data de Publicação: 2021
Outros Autores: Komosa, Martin, Sudhaman, Sumedha, Leão, Ricardo, Zhang, Cindy H., Apolonio, Joana D., Hermanns, Thomas, Wild, Peter J., Klocker, Helmut, Nassiri, Farshad, Zadeh, Gelareh, Diplas, Bill H., Yan, Hai, Gallinger, Steven, Pugh, Trevor J., Ramaswamy, Vijay, Taylor, Michael D., Castelo-Branco, Pedro, Nunes, Nuno Miguel, Tabori, Uri
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/17348
Resumo: Aberrant activation of telomerase in human cancer is achieved by various alterations within the TERT promoter, including cancer-specific DNA hypermethylation of the TERT hypermethylated oncological region (THOR). However, the impact of allele-specific DNA methylation within the TERT promoter on gene transcription remains incompletely understood. Using allele-specific next-generation sequencing, we screened a large cohort of normal and tumor tissues (n = 652) from 10 cancer types and identified that differential allelic methylation (DAM) of THOR is restricted to cancerous tissue and commonly observed in major cancer types. THOR-DAM was more common in adult cancers, which develop through multiple stages over time, than in childhood brain tumors. Furthermore, THOR-DAM was especially enriched in tumors harboring the activating TERT promoter mutations (TPMs). Functional studies revealed that allele-specific gene expression of TERT requires hypomethylation of the core promoter, both in TPM and TERT WT cancers. However, the expressing allele with hypomethylated core TERT promoter universally exhibits hypermethylation of THOR, while the nonexpressing alleles are either hypermethylated or hypomethylated throughout the promoter. Together, our findings suggest a dual role for allelespecific DNA methylation within the TERT promoter in the regulation of TERT expression in cancer.
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spelling Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancerDuplo papel de hipermetilação de DNA específica de alelo dentro do TERT no câncerMutações do promotorMetilaçãoExpressãoTelômerosAberrant activation of telomerase in human cancer is achieved by various alterations within the TERT promoter, including cancer-specific DNA hypermethylation of the TERT hypermethylated oncological region (THOR). However, the impact of allele-specific DNA methylation within the TERT promoter on gene transcription remains incompletely understood. Using allele-specific next-generation sequencing, we screened a large cohort of normal and tumor tissues (n = 652) from 10 cancer types and identified that differential allelic methylation (DAM) of THOR is restricted to cancerous tissue and commonly observed in major cancer types. THOR-DAM was more common in adult cancers, which develop through multiple stages over time, than in childhood brain tumors. Furthermore, THOR-DAM was especially enriched in tumors harboring the activating TERT promoter mutations (TPMs). Functional studies revealed that allele-specific gene expression of TERT requires hypomethylation of the core promoter, both in TPM and TERT WT cancers. However, the expressing allele with hypomethylated core TERT promoter universally exhibits hypermethylation of THOR, while the nonexpressing alleles are either hypermethylated or hypomethylated throughout the promoter. Together, our findings suggest a dual role for allelespecific DNA methylation within the TERT promoter in the regulation of TERT expression in cancer.American Soc Clinical Investigation IncSapientiaLee, Donghyun D.Komosa, MartinSudhaman, SumedhaLeão, RicardoZhang, Cindy H.Apolonio, Joana D.Hermanns, ThomasWild, Peter J.Klocker, HelmutNassiri, FarshadZadeh, GelarehDiplas, Bill H.Yan, HaiGallinger, StevenPugh, Trevor J.Ramaswamy, VijayTaylor, Michael D.Castelo-Branco, PedroNunes, Nuno MiguelTabori, Uri2021-11-23T16:23:07Z2021-11-012021-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/17348eng10.1172/JCI1469151558-8238info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:29:29Zoai:sapientia.ualg.pt:10400.1/17348Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:07:20.437999Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancer
Duplo papel de hipermetilação de DNA específica de alelo dentro do TERT no câncer
title Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancer
spellingShingle Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancer
Lee, Donghyun D.
Mutações do promotor
Metilação
Expressão
Telômeros
title_short Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancer
title_full Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancer
title_fullStr Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancer
title_full_unstemmed Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancer
title_sort Dual role of allele-specific DNA hypermethylation within the TERT promoter in cancer
author Lee, Donghyun D.
author_facet Lee, Donghyun D.
Komosa, Martin
Sudhaman, Sumedha
Leão, Ricardo
Zhang, Cindy H.
Apolonio, Joana D.
Hermanns, Thomas
Wild, Peter J.
Klocker, Helmut
Nassiri, Farshad
Zadeh, Gelareh
Diplas, Bill H.
Yan, Hai
Gallinger, Steven
Pugh, Trevor J.
Ramaswamy, Vijay
Taylor, Michael D.
Castelo-Branco, Pedro
Nunes, Nuno Miguel
Tabori, Uri
author_role author
author2 Komosa, Martin
Sudhaman, Sumedha
Leão, Ricardo
Zhang, Cindy H.
Apolonio, Joana D.
Hermanns, Thomas
Wild, Peter J.
Klocker, Helmut
Nassiri, Farshad
Zadeh, Gelareh
Diplas, Bill H.
Yan, Hai
Gallinger, Steven
Pugh, Trevor J.
Ramaswamy, Vijay
Taylor, Michael D.
Castelo-Branco, Pedro
Nunes, Nuno Miguel
Tabori, Uri
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Lee, Donghyun D.
Komosa, Martin
Sudhaman, Sumedha
Leão, Ricardo
Zhang, Cindy H.
Apolonio, Joana D.
Hermanns, Thomas
Wild, Peter J.
Klocker, Helmut
Nassiri, Farshad
Zadeh, Gelareh
Diplas, Bill H.
Yan, Hai
Gallinger, Steven
Pugh, Trevor J.
Ramaswamy, Vijay
Taylor, Michael D.
Castelo-Branco, Pedro
Nunes, Nuno Miguel
Tabori, Uri
dc.subject.por.fl_str_mv Mutações do promotor
Metilação
Expressão
Telômeros
topic Mutações do promotor
Metilação
Expressão
Telômeros
description Aberrant activation of telomerase in human cancer is achieved by various alterations within the TERT promoter, including cancer-specific DNA hypermethylation of the TERT hypermethylated oncological region (THOR). However, the impact of allele-specific DNA methylation within the TERT promoter on gene transcription remains incompletely understood. Using allele-specific next-generation sequencing, we screened a large cohort of normal and tumor tissues (n = 652) from 10 cancer types and identified that differential allelic methylation (DAM) of THOR is restricted to cancerous tissue and commonly observed in major cancer types. THOR-DAM was more common in adult cancers, which develop through multiple stages over time, than in childhood brain tumors. Furthermore, THOR-DAM was especially enriched in tumors harboring the activating TERT promoter mutations (TPMs). Functional studies revealed that allele-specific gene expression of TERT requires hypomethylation of the core promoter, both in TPM and TERT WT cancers. However, the expressing allele with hypomethylated core TERT promoter universally exhibits hypermethylation of THOR, while the nonexpressing alleles are either hypermethylated or hypomethylated throughout the promoter. Together, our findings suggest a dual role for allelespecific DNA methylation within the TERT promoter in the regulation of TERT expression in cancer.
publishDate 2021
dc.date.none.fl_str_mv 2021-11-23T16:23:07Z
2021-11-01
2021-11-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/17348
url http://hdl.handle.net/10400.1/17348
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1172/JCI146915
1558-8238
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv American Soc Clinical Investigation Inc
publisher.none.fl_str_mv American Soc Clinical Investigation Inc
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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