Accuracy of oil palm root length measuring methods
Autor(a) principal: | |
---|---|
Data de Publicação: | 2020 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | https://doi.org/10.19084/rca.18167 |
Resumo: | Length is an important variable to describe root architecture and growth, but root length (RL) measurement is extremely laborious and time-consuming. Image analysis methods can provide reliable and fast RL estimates; such tools have not been applied for oil palm, a globally relevant commodity. We tested two image analysis softwares (Safira and ImageJ) and the modified line-intersect method to estimate oil palm RL. We considered the manual measurement of RL as reference to infer about the accuracy of the image analysis and line-intersect methods. We sampled roots in an 10-yr-old oil palm plantation in eastern Amazon. We used the estimates from the image analysis to calculate a correction factor that was further applied to improve the RL estimates. We applied the Paired sample t-test (p<0.05) to separately test the original and corrected estimates of each method in relation to the reference. The original RL estimates of the image analysis and line-intersect showed limited accuracy. The correction factors improved the estimates of RL for ImageJ, but not for Safira (except for roots within the 0.20-0.99 mm diameter range). We conclude that the ImageJ software is sufficiently accurate to estimate oil palm root length when specific root diameter correction factors are applied. |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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7160 |
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Accuracy of oil palm root length measuring methodsGeralLength is an important variable to describe root architecture and growth, but root length (RL) measurement is extremely laborious and time-consuming. Image analysis methods can provide reliable and fast RL estimates; such tools have not been applied for oil palm, a globally relevant commodity. We tested two image analysis softwares (Safira and ImageJ) and the modified line-intersect method to estimate oil palm RL. We considered the manual measurement of RL as reference to infer about the accuracy of the image analysis and line-intersect methods. We sampled roots in an 10-yr-old oil palm plantation in eastern Amazon. We used the estimates from the image analysis to calculate a correction factor that was further applied to improve the RL estimates. We applied the Paired sample t-test (p<0.05) to separately test the original and corrected estimates of each method in relation to the reference. The original RL estimates of the image analysis and line-intersect showed limited accuracy. The correction factors improved the estimates of RL for ImageJ, but not for Safira (except for roots within the 0.20-0.99 mm diameter range). We conclude that the ImageJ software is sufficiently accurate to estimate oil palm root length when specific root diameter correction factors are applied.Sociedade de Ciências Agrárias de Portugal2020-05-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttps://doi.org/10.19084/rca.18167eng2183-041X0871-018XGLORIA, GERSON CARLOS PINTOAmador, JucieneVasconcelos, Steelinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-09-06T09:25:18Zoai:ojs.revistas.rcaap.pt:article/18167Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:31:20.616135Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Accuracy of oil palm root length measuring methods |
title |
Accuracy of oil palm root length measuring methods |
spellingShingle |
Accuracy of oil palm root length measuring methods GLORIA, GERSON CARLOS PINTO Geral |
title_short |
Accuracy of oil palm root length measuring methods |
title_full |
Accuracy of oil palm root length measuring methods |
title_fullStr |
Accuracy of oil palm root length measuring methods |
title_full_unstemmed |
Accuracy of oil palm root length measuring methods |
title_sort |
Accuracy of oil palm root length measuring methods |
author |
GLORIA, GERSON CARLOS PINTO |
author_facet |
GLORIA, GERSON CARLOS PINTO Amador, Juciene Vasconcelos, Steel |
author_role |
author |
author2 |
Amador, Juciene Vasconcelos, Steel |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
GLORIA, GERSON CARLOS PINTO Amador, Juciene Vasconcelos, Steel |
dc.subject.por.fl_str_mv |
Geral |
topic |
Geral |
description |
Length is an important variable to describe root architecture and growth, but root length (RL) measurement is extremely laborious and time-consuming. Image analysis methods can provide reliable and fast RL estimates; such tools have not been applied for oil palm, a globally relevant commodity. We tested two image analysis softwares (Safira and ImageJ) and the modified line-intersect method to estimate oil palm RL. We considered the manual measurement of RL as reference to infer about the accuracy of the image analysis and line-intersect methods. We sampled roots in an 10-yr-old oil palm plantation in eastern Amazon. We used the estimates from the image analysis to calculate a correction factor that was further applied to improve the RL estimates. We applied the Paired sample t-test (p<0.05) to separately test the original and corrected estimates of each method in relation to the reference. The original RL estimates of the image analysis and line-intersect showed limited accuracy. The correction factors improved the estimates of RL for ImageJ, but not for Safira (except for roots within the 0.20-0.99 mm diameter range). We conclude that the ImageJ software is sufficiently accurate to estimate oil palm root length when specific root diameter correction factors are applied. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-05-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://doi.org/10.19084/rca.18167 |
url |
https://doi.org/10.19084/rca.18167 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
2183-041X 0871-018X |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Sociedade de Ciências Agrárias de Portugal |
publisher.none.fl_str_mv |
Sociedade de Ciências Agrárias de Portugal |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
|
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1799130178565177344 |