fuzzySim: Fuzzy similarity in species distributions

Detalhes bibliográficos
Autor(a) principal: Barbosa, A. Márcia
Data de Publicação: 2015
Tipo de documento: Relatório
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10174/18929
Resumo: fuzzySim is an R package for calculating fuzzy similarity in species occurrence patterns. It includes functions for data preparation, such as converting species lists (long format) to presence-absence tables (wide format), obtaining unique abbreviations of species names, or transposing (parts of) complex data frames; and sample data sets for providing practical examples. It can convert binary presence-absence to fuzzy occurrence data, using e.g. trend surface analysis, inverse distance interpolation or prevalence-independent environmental favourability modelling, for multiple species simultaneously. It then calculates fuzzy similarity among (fuzzy) species distributions and/or among (fuzzy) regional species compositions. Currently available similarity indices are Jaccard, Sørensen, Simpson, and Baroni-Urbani & Buser.
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spelling fuzzySim: Fuzzy similarity in species distributionssimilarityspecies distribution modellingbiogeographic regionsfuzzy logicfuzzySim is an R package for calculating fuzzy similarity in species occurrence patterns. It includes functions for data preparation, such as converting species lists (long format) to presence-absence tables (wide format), obtaining unique abbreviations of species names, or transposing (parts of) complex data frames; and sample data sets for providing practical examples. It can convert binary presence-absence to fuzzy occurrence data, using e.g. trend surface analysis, inverse distance interpolation or prevalence-independent environmental favourability modelling, for multiple species simultaneously. It then calculates fuzzy similarity among (fuzzy) species distributions and/or among (fuzzy) regional species compositions. Currently available similarity indices are Jaccard, Sørensen, Simpson, and Baroni-Urbani & Buser.2016-09-07T12:04:17Z2016-09-072015-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/reporthttp://hdl.handle.net/10174/18929http://hdl.handle.net/10174/18929engBarbosa A.M. (2015) fuzzySim: Fuzzy similarity in species distributions. R package version 1.3. Available at: http://R-Forge.R-project.org/projects/fuzzysim.http://fuzzysim.r-forge.r-project.org/barbosa@uevora.pt221Barbosa, A. Márciainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-03T19:01:42Zoai:dspace.uevora.pt:10174/18929Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:08:08.113979Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv fuzzySim: Fuzzy similarity in species distributions
title fuzzySim: Fuzzy similarity in species distributions
spellingShingle fuzzySim: Fuzzy similarity in species distributions
Barbosa, A. Márcia
similarity
species distribution modelling
biogeographic regions
fuzzy logic
title_short fuzzySim: Fuzzy similarity in species distributions
title_full fuzzySim: Fuzzy similarity in species distributions
title_fullStr fuzzySim: Fuzzy similarity in species distributions
title_full_unstemmed fuzzySim: Fuzzy similarity in species distributions
title_sort fuzzySim: Fuzzy similarity in species distributions
author Barbosa, A. Márcia
author_facet Barbosa, A. Márcia
author_role author
dc.contributor.author.fl_str_mv Barbosa, A. Márcia
dc.subject.por.fl_str_mv similarity
species distribution modelling
biogeographic regions
fuzzy logic
topic similarity
species distribution modelling
biogeographic regions
fuzzy logic
description fuzzySim is an R package for calculating fuzzy similarity in species occurrence patterns. It includes functions for data preparation, such as converting species lists (long format) to presence-absence tables (wide format), obtaining unique abbreviations of species names, or transposing (parts of) complex data frames; and sample data sets for providing practical examples. It can convert binary presence-absence to fuzzy occurrence data, using e.g. trend surface analysis, inverse distance interpolation or prevalence-independent environmental favourability modelling, for multiple species simultaneously. It then calculates fuzzy similarity among (fuzzy) species distributions and/or among (fuzzy) regional species compositions. Currently available similarity indices are Jaccard, Sørensen, Simpson, and Baroni-Urbani & Buser.
publishDate 2015
dc.date.none.fl_str_mv 2015-01-01T00:00:00Z
2016-09-07T12:04:17Z
2016-09-07
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/report
format report
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10174/18929
http://hdl.handle.net/10174/18929
url http://hdl.handle.net/10174/18929
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Barbosa A.M. (2015) fuzzySim: Fuzzy similarity in species distributions. R package version 1.3. Available at: http://R-Forge.R-project.org/projects/fuzzysim.
http://fuzzysim.r-forge.r-project.org/
barbosa@uevora.pt
221
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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