Mobile-Based Analysis of Malaria-Infected Thin Blood Smears: Automated Species and Life Cycle Stage Determination

Detalhes bibliográficos
Autor(a) principal: Rosado, Luís
Data de Publicação: 2017
Outros Autores: da Costa, José M. Correia, Elias, Dirk, Cardoso, Jaime S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/5448
Resumo: Microscopy examination has been the pillar of malaria diagnosis, being the recommended procedure when its quality can be maintained. However, the need for trained personnel and adequate equipment limits its availability and accessibility in malaria-endemic areas. Rapid, accurate, accessible diagnostic tools are increasingly required, as malaria control programs extend parasite-based diagnosis and the prevalence decreases. This paper presents an image processing and analysis methodology using supervised classification to assess the presence of malaria parasites and determine the species and life cycle stage in Giemsa-stained thin blood smears. The main differentiation factor is the usage of microscopic images exclusively acquired with low cost and accessible tools such as smartphones, a dataset of 566 images manually annotated by an experienced parasilogist being used. Eight different species-stage combinations were considered in this work, with an automatic detection performance ranging from 73.9% to 96.2% in terms of sensitivity and from 92.6% to 99.3% in terms of specificity. These promising results attest to the potential of using this approach as a valid alternative to conventional microscopy examination, with comparable detection performances and acceptable computational times.
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spelling Mobile-Based Analysis of Malaria-Infected Thin Blood Smears: Automated Species and Life Cycle Stage DeterminationComputer-aided DiagnosisImage AnalysisMalariaMicroscopyMobile DevicesInfecções Sistémicas e ZoonosesMicroscopy examination has been the pillar of malaria diagnosis, being the recommended procedure when its quality can be maintained. However, the need for trained personnel and adequate equipment limits its availability and accessibility in malaria-endemic areas. Rapid, accurate, accessible diagnostic tools are increasingly required, as malaria control programs extend parasite-based diagnosis and the prevalence decreases. This paper presents an image processing and analysis methodology using supervised classification to assess the presence of malaria parasites and determine the species and life cycle stage in Giemsa-stained thin blood smears. The main differentiation factor is the usage of microscopic images exclusively acquired with low cost and accessible tools such as smartphones, a dataset of 566 images manually annotated by an experienced parasilogist being used. Eight different species-stage combinations were considered in this work, with an automatic detection performance ranging from 73.9% to 96.2% in terms of sensitivity and from 92.6% to 99.3% in terms of specificity. These promising results attest to the potential of using this approach as a valid alternative to conventional microscopy examination, with comparable detection performances and acceptable computational times.Financial support from North Portugal Regional Operational Programme (NORTE2020), Portugal 2020 and the European Regional Development Fund (ERDF) from the European Union through the project Deus ex Machina: Symbiotic Technology for Societal Efficiency Gains’, NORTE-01-0145-FEDER-000026.MDPIRepositório Científico do Instituto Nacional de SaúdeRosado, Luísda Costa, José M. CorreiaElias, DirkCardoso, Jaime S.2018-03-22T18:30:26Z2017-09-212017-09-21T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/5448engSensors (Basel). 2017 Sep 21;17(10). pii: E2167. doi: 10.3390/s17102167.1424-822010.3390/s17102167info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:40:52Zoai:repositorio.insa.pt:10400.18/5448Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:40:08.467164Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Mobile-Based Analysis of Malaria-Infected Thin Blood Smears: Automated Species and Life Cycle Stage Determination
title Mobile-Based Analysis of Malaria-Infected Thin Blood Smears: Automated Species and Life Cycle Stage Determination
spellingShingle Mobile-Based Analysis of Malaria-Infected Thin Blood Smears: Automated Species and Life Cycle Stage Determination
Rosado, Luís
Computer-aided Diagnosis
Image Analysis
Malaria
Microscopy
Mobile Devices
Infecções Sistémicas e Zoonoses
title_short Mobile-Based Analysis of Malaria-Infected Thin Blood Smears: Automated Species and Life Cycle Stage Determination
title_full Mobile-Based Analysis of Malaria-Infected Thin Blood Smears: Automated Species and Life Cycle Stage Determination
title_fullStr Mobile-Based Analysis of Malaria-Infected Thin Blood Smears: Automated Species and Life Cycle Stage Determination
title_full_unstemmed Mobile-Based Analysis of Malaria-Infected Thin Blood Smears: Automated Species and Life Cycle Stage Determination
title_sort Mobile-Based Analysis of Malaria-Infected Thin Blood Smears: Automated Species and Life Cycle Stage Determination
author Rosado, Luís
author_facet Rosado, Luís
da Costa, José M. Correia
Elias, Dirk
Cardoso, Jaime S.
author_role author
author2 da Costa, José M. Correia
Elias, Dirk
Cardoso, Jaime S.
author2_role author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv Rosado, Luís
da Costa, José M. Correia
Elias, Dirk
Cardoso, Jaime S.
dc.subject.por.fl_str_mv Computer-aided Diagnosis
Image Analysis
Malaria
Microscopy
Mobile Devices
Infecções Sistémicas e Zoonoses
topic Computer-aided Diagnosis
Image Analysis
Malaria
Microscopy
Mobile Devices
Infecções Sistémicas e Zoonoses
description Microscopy examination has been the pillar of malaria diagnosis, being the recommended procedure when its quality can be maintained. However, the need for trained personnel and adequate equipment limits its availability and accessibility in malaria-endemic areas. Rapid, accurate, accessible diagnostic tools are increasingly required, as malaria control programs extend parasite-based diagnosis and the prevalence decreases. This paper presents an image processing and analysis methodology using supervised classification to assess the presence of malaria parasites and determine the species and life cycle stage in Giemsa-stained thin blood smears. The main differentiation factor is the usage of microscopic images exclusively acquired with low cost and accessible tools such as smartphones, a dataset of 566 images manually annotated by an experienced parasilogist being used. Eight different species-stage combinations were considered in this work, with an automatic detection performance ranging from 73.9% to 96.2% in terms of sensitivity and from 92.6% to 99.3% in terms of specificity. These promising results attest to the potential of using this approach as a valid alternative to conventional microscopy examination, with comparable detection performances and acceptable computational times.
publishDate 2017
dc.date.none.fl_str_mv 2017-09-21
2017-09-21T00:00:00Z
2018-03-22T18:30:26Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/5448
url http://hdl.handle.net/10400.18/5448
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Sensors (Basel). 2017 Sep 21;17(10). pii: E2167. doi: 10.3390/s17102167.
1424-8220
10.3390/s17102167
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