The Leaf Bacterial Microbiota of Female and Male Kiwifruit Plants in Distinct Seasons: Assessing the Impact of Pseudomonas syringae pv. actinidiae

Detalhes bibliográficos
Autor(a) principal: Ares, Aitana
Data de Publicação: 2021
Outros Autores: Pereira, Joana, Garcia, Eva, Costa, Joana, Tiago, Igor
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/100819
https://doi.org/10.1094/PBIOMES-09-20-0070-R
Resumo: The Pseudomonas syringae pv. actinidiae pandemic has been compromising the production of the kiwifruit industry in major producing countries. Abiotic factors and plant gender are known to influence the disease outcome. To better understand their impact, we have determined the diversity of the leaf bacterial communities using the V5-V6 region of the 16S ribosomal RNA gene amplicon on the Illumina MiSeq sequencing platform. Healthy and diseased female and male kiwifruit plants were analyzed in two consecutive seasons: Spring and autumn. This work describes whether the season, plant gender, and presence of P. syringae pv. actinidiae can affect the leaf bacterial community. Fifty bacterial operational taxonomic units were identified and assigned to five phyla distributed by 14 different families and 23 genera. The leaves of healthy female and male kiwi plants share most of the identified bacterial populations, which undergo major seasonal changes. In both cases, a substantial increase of the relative abundance of genus Methylobacterium is observed in autumn. The presence of P. syringae pv. actinidiae induced profound changes on leaf bacterial community structures, translated into a reduction in the relative abundance of previously dominant genera that had been found in healthy plants; namely, Hymenobacter, Sphingomonas, and Massilia spp. The impact of P. syringae pv. actinidiae was less pronounced in the bacterial community structure of male plants in both seasons. Some of the naturally occurring genera have the potential to act as antagonists or as enhancers of the defense mechanisms, paving the way for environmentally friendly and sustainable disease control.
id RCAP_c2fc77649c3743d6d5b582f7b3158642
oai_identifier_str oai:estudogeral.uc.pt:10316/100819
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling The Leaf Bacterial Microbiota of Female and Male Kiwifruit Plants in Distinct Seasons: Assessing the Impact of Pseudomonas syringae pv. actinidiaeActinidia chinensis varActinidiaestructural diversityDeliciosaIllumina MiSeq sequencingleaf bacterial biocoenosisPseudomonas syringae pvThe Pseudomonas syringae pv. actinidiae pandemic has been compromising the production of the kiwifruit industry in major producing countries. Abiotic factors and plant gender are known to influence the disease outcome. To better understand their impact, we have determined the diversity of the leaf bacterial communities using the V5-V6 region of the 16S ribosomal RNA gene amplicon on the Illumina MiSeq sequencing platform. Healthy and diseased female and male kiwifruit plants were analyzed in two consecutive seasons: Spring and autumn. This work describes whether the season, plant gender, and presence of P. syringae pv. actinidiae can affect the leaf bacterial community. Fifty bacterial operational taxonomic units were identified and assigned to five phyla distributed by 14 different families and 23 genera. The leaves of healthy female and male kiwi plants share most of the identified bacterial populations, which undergo major seasonal changes. In both cases, a substantial increase of the relative abundance of genus Methylobacterium is observed in autumn. The presence of P. syringae pv. actinidiae induced profound changes on leaf bacterial community structures, translated into a reduction in the relative abundance of previously dominant genera that had been found in healthy plants; namely, Hymenobacter, Sphingomonas, and Massilia spp. The impact of P. syringae pv. actinidiae was less pronounced in the bacterial community structure of male plants in both seasons. Some of the naturally occurring genera have the potential to act as antagonists or as enhancers of the defense mechanisms, paving the way for environmentally friendly and sustainable disease control.2021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/100819http://hdl.handle.net/10316/100819https://doi.org/10.1094/PBIOMES-09-20-0070-Reng2471-2906Ares, AitanaPereira, JoanaGarcia, EvaCosta, JoanaTiago, Igorinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-07-13T11:57:29Zoai:estudogeral.uc.pt:10316/100819Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:18:07.668964Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv The Leaf Bacterial Microbiota of Female and Male Kiwifruit Plants in Distinct Seasons: Assessing the Impact of Pseudomonas syringae pv. actinidiae
title The Leaf Bacterial Microbiota of Female and Male Kiwifruit Plants in Distinct Seasons: Assessing the Impact of Pseudomonas syringae pv. actinidiae
spellingShingle The Leaf Bacterial Microbiota of Female and Male Kiwifruit Plants in Distinct Seasons: Assessing the Impact of Pseudomonas syringae pv. actinidiae
Ares, Aitana
Actinidia chinensis var
Actinidiae
structural diversity
Deliciosa
Illumina MiSeq sequencing
leaf bacterial biocoenosis
Pseudomonas syringae pv
title_short The Leaf Bacterial Microbiota of Female and Male Kiwifruit Plants in Distinct Seasons: Assessing the Impact of Pseudomonas syringae pv. actinidiae
title_full The Leaf Bacterial Microbiota of Female and Male Kiwifruit Plants in Distinct Seasons: Assessing the Impact of Pseudomonas syringae pv. actinidiae
title_fullStr The Leaf Bacterial Microbiota of Female and Male Kiwifruit Plants in Distinct Seasons: Assessing the Impact of Pseudomonas syringae pv. actinidiae
title_full_unstemmed The Leaf Bacterial Microbiota of Female and Male Kiwifruit Plants in Distinct Seasons: Assessing the Impact of Pseudomonas syringae pv. actinidiae
title_sort The Leaf Bacterial Microbiota of Female and Male Kiwifruit Plants in Distinct Seasons: Assessing the Impact of Pseudomonas syringae pv. actinidiae
author Ares, Aitana
author_facet Ares, Aitana
Pereira, Joana
Garcia, Eva
Costa, Joana
Tiago, Igor
author_role author
author2 Pereira, Joana
Garcia, Eva
Costa, Joana
Tiago, Igor
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Ares, Aitana
Pereira, Joana
Garcia, Eva
Costa, Joana
Tiago, Igor
dc.subject.por.fl_str_mv Actinidia chinensis var
Actinidiae
structural diversity
Deliciosa
Illumina MiSeq sequencing
leaf bacterial biocoenosis
Pseudomonas syringae pv
topic Actinidia chinensis var
Actinidiae
structural diversity
Deliciosa
Illumina MiSeq sequencing
leaf bacterial biocoenosis
Pseudomonas syringae pv
description The Pseudomonas syringae pv. actinidiae pandemic has been compromising the production of the kiwifruit industry in major producing countries. Abiotic factors and plant gender are known to influence the disease outcome. To better understand their impact, we have determined the diversity of the leaf bacterial communities using the V5-V6 region of the 16S ribosomal RNA gene amplicon on the Illumina MiSeq sequencing platform. Healthy and diseased female and male kiwifruit plants were analyzed in two consecutive seasons: Spring and autumn. This work describes whether the season, plant gender, and presence of P. syringae pv. actinidiae can affect the leaf bacterial community. Fifty bacterial operational taxonomic units were identified and assigned to five phyla distributed by 14 different families and 23 genera. The leaves of healthy female and male kiwi plants share most of the identified bacterial populations, which undergo major seasonal changes. In both cases, a substantial increase of the relative abundance of genus Methylobacterium is observed in autumn. The presence of P. syringae pv. actinidiae induced profound changes on leaf bacterial community structures, translated into a reduction in the relative abundance of previously dominant genera that had been found in healthy plants; namely, Hymenobacter, Sphingomonas, and Massilia spp. The impact of P. syringae pv. actinidiae was less pronounced in the bacterial community structure of male plants in both seasons. Some of the naturally occurring genera have the potential to act as antagonists or as enhancers of the defense mechanisms, paving the way for environmentally friendly and sustainable disease control.
publishDate 2021
dc.date.none.fl_str_mv 2021
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/100819
http://hdl.handle.net/10316/100819
https://doi.org/10.1094/PBIOMES-09-20-0070-R
url http://hdl.handle.net/10316/100819
https://doi.org/10.1094/PBIOMES-09-20-0070-R
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2471-2906
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799134076313010176