Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip

Detalhes bibliográficos
Autor(a) principal: Carvalho, Denise Andreia Mota
Data de Publicação: 2022
Outros Autores: Pinto, Vânia Cristina Gonçalves, Sousa, Paulo Jorge Teixeira, Magalhães, Vitor H., Fernández, Emilio, Gomes, Pedro A., Minas, Graça, Gonçalves, Luís M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/1822/79901
Resumo: This paper presents the absorbance and fluorescence optical properties of various phytoplankton species, looking to achieve an accurate method to detect and identify a number of phytoplankton taxonomic groups. The methodology to select the excitation and detection wavelengths that results in superior identification of phytoplankton is reported. The macroscopic analyses and the implemented methodology are the base for designing a lab-on-a-chip device for a phytoplankton group identification, based on cell analysis with multi-wavelength lighting excitation, aiming for a cheap and portable platform. With such methodology in a lab-on-a-chip device, the analysis of the phytoplankton cells’ optical properties, e.g., fluorescence, diffraction, absorption and reflection, will be possible. This device will offer, in the future, a platform for continuous, autonomous and in situ underwater measurements, in opposition to the conventional methodology. A proof-of-concept device with LED light excitation at 450 nm and a detection photodiode at 680 nm was fabricated. This device was able to quantify the concentration of the phytoplankton chlorophyll a. A lock-in amplifier electronic circuit was developed and integrated in a portable and low-cost sensor, featuring continuous, autonomous and in situ underwater measurements. This device has a detection limit of 0.01 µ/L of chlorophyll a, in a range up to 300 µg/L, with a linear voltage output with chlorophyll concentration.
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spelling Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chipphytoplankton sensoroptical methodsphotosynthetic pigmentlab-on-a-chipEngenharia e Tecnologia::Engenharia Eletrotécnica, Eletrónica e InformáticaEngenharia e Tecnologia::Outras Engenharias e TecnologiasScience & TechnologyThis paper presents the absorbance and fluorescence optical properties of various phytoplankton species, looking to achieve an accurate method to detect and identify a number of phytoplankton taxonomic groups. The methodology to select the excitation and detection wavelengths that results in superior identification of phytoplankton is reported. The macroscopic analyses and the implemented methodology are the base for designing a lab-on-a-chip device for a phytoplankton group identification, based on cell analysis with multi-wavelength lighting excitation, aiming for a cheap and portable platform. With such methodology in a lab-on-a-chip device, the analysis of the phytoplankton cells’ optical properties, e.g., fluorescence, diffraction, absorption and reflection, will be possible. This device will offer, in the future, a platform for continuous, autonomous and in situ underwater measurements, in opposition to the conventional methodology. A proof-of-concept device with LED light excitation at 450 nm and a detection photodiode at 680 nm was fabricated. This device was able to quantify the concentration of the phytoplankton chlorophyll a. A lock-in amplifier electronic circuit was developed and integrated in a portable and low-cost sensor, featuring continuous, autonomous and in situ underwater measurements. This device has a detection limit of 0.01 µ/L of chlorophyll a, in a range up to 300 µg/L, with a linear voltage output with chlorophyll concentration.This work was co-financed by the European Regional Development Fund (ERDF) through the Interreg VA Spain-Portugal (POCTEP) 2014-2020 Program under grant agreement 0591_FOODSENS_1_E, under the national support to R&D units grant, through the reference project UIDB/04436/2020 and UIDP/04436/2020, and by project NORTE-08-5369-FSE-000039 co-founded by the European Social Fund FSE and through National funds NORTE 2020 and Regional Operacional Programa of North 2014/2020. The University of Vigo work was funded by a Xunta de Galicia grant to the Biological Oceanography Research Group (Consolidacion e estruturacion de unidades). This output reflects only the views of the authors, and the program authorities cannot be held responsible for any use that may be made of the information contained therein.Multidisciplinary Digital Publishing InstituteUniversidade do MinhoCarvalho, Denise Andreia MotaPinto, Vânia Cristina GonçalvesSousa, Paulo Jorge TeixeiraMagalhães, Vitor H.Fernández, EmilioGomes, Pedro A.Minas, GraçaGonçalves, Luís M.2022-05-262022-05-26T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/79901engCarvalho, D.A.M.; Pinto, V.C.; Sousa, P.J.; Magalhães, V.H.; Fernández, E.; Gomes, P.A.; Minas, G.; Gonçalves, L.M. Methodology for Phytoplankton Taxonomic Group Identification towards the Development of a Lab-on-a-Chip. Appl. Sci. 2022, 12, 5376. https://doi.org/10.3390/app121153762076-341710.3390/app12115376https://www.mdpi.com/2076-3417/12/11/5376info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:22:01Zoai:repositorium.sdum.uminho.pt:1822/79901Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:15:25.763042Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip
title Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip
spellingShingle Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip
Carvalho, Denise Andreia Mota
phytoplankton sensor
optical methods
photosynthetic pigment
lab-on-a-chip
Engenharia e Tecnologia::Engenharia Eletrotécnica, Eletrónica e Informática
Engenharia e Tecnologia::Outras Engenharias e Tecnologias
Science & Technology
title_short Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip
title_full Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip
title_fullStr Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip
title_full_unstemmed Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip
title_sort Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip
author Carvalho, Denise Andreia Mota
author_facet Carvalho, Denise Andreia Mota
Pinto, Vânia Cristina Gonçalves
Sousa, Paulo Jorge Teixeira
Magalhães, Vitor H.
Fernández, Emilio
Gomes, Pedro A.
Minas, Graça
Gonçalves, Luís M.
author_role author
author2 Pinto, Vânia Cristina Gonçalves
Sousa, Paulo Jorge Teixeira
Magalhães, Vitor H.
Fernández, Emilio
Gomes, Pedro A.
Minas, Graça
Gonçalves, Luís M.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Carvalho, Denise Andreia Mota
Pinto, Vânia Cristina Gonçalves
Sousa, Paulo Jorge Teixeira
Magalhães, Vitor H.
Fernández, Emilio
Gomes, Pedro A.
Minas, Graça
Gonçalves, Luís M.
dc.subject.por.fl_str_mv phytoplankton sensor
optical methods
photosynthetic pigment
lab-on-a-chip
Engenharia e Tecnologia::Engenharia Eletrotécnica, Eletrónica e Informática
Engenharia e Tecnologia::Outras Engenharias e Tecnologias
Science & Technology
topic phytoplankton sensor
optical methods
photosynthetic pigment
lab-on-a-chip
Engenharia e Tecnologia::Engenharia Eletrotécnica, Eletrónica e Informática
Engenharia e Tecnologia::Outras Engenharias e Tecnologias
Science & Technology
description This paper presents the absorbance and fluorescence optical properties of various phytoplankton species, looking to achieve an accurate method to detect and identify a number of phytoplankton taxonomic groups. The methodology to select the excitation and detection wavelengths that results in superior identification of phytoplankton is reported. The macroscopic analyses and the implemented methodology are the base for designing a lab-on-a-chip device for a phytoplankton group identification, based on cell analysis with multi-wavelength lighting excitation, aiming for a cheap and portable platform. With such methodology in a lab-on-a-chip device, the analysis of the phytoplankton cells’ optical properties, e.g., fluorescence, diffraction, absorption and reflection, will be possible. This device will offer, in the future, a platform for continuous, autonomous and in situ underwater measurements, in opposition to the conventional methodology. A proof-of-concept device with LED light excitation at 450 nm and a detection photodiode at 680 nm was fabricated. This device was able to quantify the concentration of the phytoplankton chlorophyll a. A lock-in amplifier electronic circuit was developed and integrated in a portable and low-cost sensor, featuring continuous, autonomous and in situ underwater measurements. This device has a detection limit of 0.01 µ/L of chlorophyll a, in a range up to 300 µg/L, with a linear voltage output with chlorophyll concentration.
publishDate 2022
dc.date.none.fl_str_mv 2022-05-26
2022-05-26T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/1822/79901
url https://hdl.handle.net/1822/79901
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Carvalho, D.A.M.; Pinto, V.C.; Sousa, P.J.; Magalhães, V.H.; Fernández, E.; Gomes, P.A.; Minas, G.; Gonçalves, L.M. Methodology for Phytoplankton Taxonomic Group Identification towards the Development of a Lab-on-a-Chip. Appl. Sci. 2022, 12, 5376. https://doi.org/10.3390/app12115376
2076-3417
10.3390/app12115376
https://www.mdpi.com/2076-3417/12/11/5376
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute
publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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