Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | https://hdl.handle.net/1822/79901 |
Resumo: | This paper presents the absorbance and fluorescence optical properties of various phytoplankton species, looking to achieve an accurate method to detect and identify a number of phytoplankton taxonomic groups. The methodology to select the excitation and detection wavelengths that results in superior identification of phytoplankton is reported. The macroscopic analyses and the implemented methodology are the base for designing a lab-on-a-chip device for a phytoplankton group identification, based on cell analysis with multi-wavelength lighting excitation, aiming for a cheap and portable platform. With such methodology in a lab-on-a-chip device, the analysis of the phytoplankton cells’ optical properties, e.g., fluorescence, diffraction, absorption and reflection, will be possible. This device will offer, in the future, a platform for continuous, autonomous and in situ underwater measurements, in opposition to the conventional methodology. A proof-of-concept device with LED light excitation at 450 nm and a detection photodiode at 680 nm was fabricated. This device was able to quantify the concentration of the phytoplankton chlorophyll a. A lock-in amplifier electronic circuit was developed and integrated in a portable and low-cost sensor, featuring continuous, autonomous and in situ underwater measurements. This device has a detection limit of 0.01 µ/L of chlorophyll a, in a range up to 300 µg/L, with a linear voltage output with chlorophyll concentration. |
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Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chipphytoplankton sensoroptical methodsphotosynthetic pigmentlab-on-a-chipEngenharia e Tecnologia::Engenharia Eletrotécnica, Eletrónica e InformáticaEngenharia e Tecnologia::Outras Engenharias e TecnologiasScience & TechnologyThis paper presents the absorbance and fluorescence optical properties of various phytoplankton species, looking to achieve an accurate method to detect and identify a number of phytoplankton taxonomic groups. The methodology to select the excitation and detection wavelengths that results in superior identification of phytoplankton is reported. The macroscopic analyses and the implemented methodology are the base for designing a lab-on-a-chip device for a phytoplankton group identification, based on cell analysis with multi-wavelength lighting excitation, aiming for a cheap and portable platform. With such methodology in a lab-on-a-chip device, the analysis of the phytoplankton cells’ optical properties, e.g., fluorescence, diffraction, absorption and reflection, will be possible. This device will offer, in the future, a platform for continuous, autonomous and in situ underwater measurements, in opposition to the conventional methodology. A proof-of-concept device with LED light excitation at 450 nm and a detection photodiode at 680 nm was fabricated. This device was able to quantify the concentration of the phytoplankton chlorophyll a. A lock-in amplifier electronic circuit was developed and integrated in a portable and low-cost sensor, featuring continuous, autonomous and in situ underwater measurements. This device has a detection limit of 0.01 µ/L of chlorophyll a, in a range up to 300 µg/L, with a linear voltage output with chlorophyll concentration.This work was co-financed by the European Regional Development Fund (ERDF) through the Interreg VA Spain-Portugal (POCTEP) 2014-2020 Program under grant agreement 0591_FOODSENS_1_E, under the national support to R&D units grant, through the reference project UIDB/04436/2020 and UIDP/04436/2020, and by project NORTE-08-5369-FSE-000039 co-founded by the European Social Fund FSE and through National funds NORTE 2020 and Regional Operacional Programa of North 2014/2020. The University of Vigo work was funded by a Xunta de Galicia grant to the Biological Oceanography Research Group (Consolidacion e estruturacion de unidades). This output reflects only the views of the authors, and the program authorities cannot be held responsible for any use that may be made of the information contained therein.Multidisciplinary Digital Publishing InstituteUniversidade do MinhoCarvalho, Denise Andreia MotaPinto, Vânia Cristina GonçalvesSousa, Paulo Jorge TeixeiraMagalhães, Vitor H.Fernández, EmilioGomes, Pedro A.Minas, GraçaGonçalves, Luís M.2022-05-262022-05-26T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/79901engCarvalho, D.A.M.; Pinto, V.C.; Sousa, P.J.; Magalhães, V.H.; Fernández, E.; Gomes, P.A.; Minas, G.; Gonçalves, L.M. Methodology for Phytoplankton Taxonomic Group Identification towards the Development of a Lab-on-a-Chip. Appl. Sci. 2022, 12, 5376. https://doi.org/10.3390/app121153762076-341710.3390/app12115376https://www.mdpi.com/2076-3417/12/11/5376info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:22:01Zoai:repositorium.sdum.uminho.pt:1822/79901Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:15:25.763042Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip |
title |
Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip |
spellingShingle |
Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip Carvalho, Denise Andreia Mota phytoplankton sensor optical methods photosynthetic pigment lab-on-a-chip Engenharia e Tecnologia::Engenharia Eletrotécnica, Eletrónica e Informática Engenharia e Tecnologia::Outras Engenharias e Tecnologias Science & Technology |
title_short |
Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip |
title_full |
Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip |
title_fullStr |
Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip |
title_full_unstemmed |
Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip |
title_sort |
Methodology for phytoplankton taxonomic group identification towards the development of a lab-on-a-chip |
author |
Carvalho, Denise Andreia Mota |
author_facet |
Carvalho, Denise Andreia Mota Pinto, Vânia Cristina Gonçalves Sousa, Paulo Jorge Teixeira Magalhães, Vitor H. Fernández, Emilio Gomes, Pedro A. Minas, Graça Gonçalves, Luís M. |
author_role |
author |
author2 |
Pinto, Vânia Cristina Gonçalves Sousa, Paulo Jorge Teixeira Magalhães, Vitor H. Fernández, Emilio Gomes, Pedro A. Minas, Graça Gonçalves, Luís M. |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Carvalho, Denise Andreia Mota Pinto, Vânia Cristina Gonçalves Sousa, Paulo Jorge Teixeira Magalhães, Vitor H. Fernández, Emilio Gomes, Pedro A. Minas, Graça Gonçalves, Luís M. |
dc.subject.por.fl_str_mv |
phytoplankton sensor optical methods photosynthetic pigment lab-on-a-chip Engenharia e Tecnologia::Engenharia Eletrotécnica, Eletrónica e Informática Engenharia e Tecnologia::Outras Engenharias e Tecnologias Science & Technology |
topic |
phytoplankton sensor optical methods photosynthetic pigment lab-on-a-chip Engenharia e Tecnologia::Engenharia Eletrotécnica, Eletrónica e Informática Engenharia e Tecnologia::Outras Engenharias e Tecnologias Science & Technology |
description |
This paper presents the absorbance and fluorescence optical properties of various phytoplankton species, looking to achieve an accurate method to detect and identify a number of phytoplankton taxonomic groups. The methodology to select the excitation and detection wavelengths that results in superior identification of phytoplankton is reported. The macroscopic analyses and the implemented methodology are the base for designing a lab-on-a-chip device for a phytoplankton group identification, based on cell analysis with multi-wavelength lighting excitation, aiming for a cheap and portable platform. With such methodology in a lab-on-a-chip device, the analysis of the phytoplankton cells’ optical properties, e.g., fluorescence, diffraction, absorption and reflection, will be possible. This device will offer, in the future, a platform for continuous, autonomous and in situ underwater measurements, in opposition to the conventional methodology. A proof-of-concept device with LED light excitation at 450 nm and a detection photodiode at 680 nm was fabricated. This device was able to quantify the concentration of the phytoplankton chlorophyll a. A lock-in amplifier electronic circuit was developed and integrated in a portable and low-cost sensor, featuring continuous, autonomous and in situ underwater measurements. This device has a detection limit of 0.01 µ/L of chlorophyll a, in a range up to 300 µg/L, with a linear voltage output with chlorophyll concentration. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-05-26 2022-05-26T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://hdl.handle.net/1822/79901 |
url |
https://hdl.handle.net/1822/79901 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Carvalho, D.A.M.; Pinto, V.C.; Sousa, P.J.; Magalhães, V.H.; Fernández, E.; Gomes, P.A.; Minas, G.; Gonçalves, L.M. Methodology for Phytoplankton Taxonomic Group Identification towards the Development of a Lab-on-a-Chip. Appl. Sci. 2022, 12, 5376. https://doi.org/10.3390/app12115376 2076-3417 10.3390/app12115376 https://www.mdpi.com/2076-3417/12/11/5376 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Multidisciplinary Digital Publishing Institute |
publisher.none.fl_str_mv |
Multidisciplinary Digital Publishing Institute |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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