Patient data discovery platforms as enablers of biomedical and translational research: a systematic review

Detalhes bibliográficos
Autor(a) principal: Trifan, Alina
Data de Publicação: 2019
Outros Autores: Oliveira, José Luís
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/37465
Resumo: Background: The global shift from paper health records to electronic ones has led to an impressive growth of biomedical digital data along the past two decades. Exploring and extracting knowledge from these data has the potential to enhance translational research and lead to positive outcomes for the population’s health and healthcare. Obective: The aim of this study was to conduct a systematic review to identify software platforms that enable discovery, secondary use and interoperability of biomedical data. Additionally, we aim evaluating the identified solutions in terms of clinical interest and main healthcare-related outcomes. Methods: A systematic search of the scientific literature published and indexed in Pubmed between January 2014 and September 2018 was performed. Inclusion criteria were as follows: relevance for the topic of bio- medical data discovery, English language, and free full text. To increase the recall, we developed a semi-auto- matic and incremental methodology to retrieve articles that cite one or more of the previous set. Results: A total number of 500 candidate papers were retrieved through this methodology. Of these, 85 were eligible for abstract assessment. Finally, 37 studies qualified for a full-text review, and 20 provided enough information for the study objectives. Conclusions: This study revealed that biomedical discovery platforms are both a current necessity and a sig- nificantly innovative agent in the area of healthcare. The outcomes that were identified, in terms of scientific publications, clinical studies and research collaborations stand as evidence.
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spelling Patient data discovery platforms as enablers of biomedical and translational research: a systematic reviewBiomedical data discoveryDiscovery platformsData interoperabilitySecondary use of dataTranslational researchBackground: The global shift from paper health records to electronic ones has led to an impressive growth of biomedical digital data along the past two decades. Exploring and extracting knowledge from these data has the potential to enhance translational research and lead to positive outcomes for the population’s health and healthcare. Obective: The aim of this study was to conduct a systematic review to identify software platforms that enable discovery, secondary use and interoperability of biomedical data. Additionally, we aim evaluating the identified solutions in terms of clinical interest and main healthcare-related outcomes. Methods: A systematic search of the scientific literature published and indexed in Pubmed between January 2014 and September 2018 was performed. Inclusion criteria were as follows: relevance for the topic of bio- medical data discovery, English language, and free full text. To increase the recall, we developed a semi-auto- matic and incremental methodology to retrieve articles that cite one or more of the previous set. Results: A total number of 500 candidate papers were retrieved through this methodology. Of these, 85 were eligible for abstract assessment. Finally, 37 studies qualified for a full-text review, and 20 provided enough information for the study objectives. Conclusions: This study revealed that biomedical discovery platforms are both a current necessity and a sig- nificantly innovative agent in the area of healthcare. The outcomes that were identified, in terms of scientific publications, clinical studies and research collaborations stand as evidence.Elsevier2023-05-02T14:03:40Z2019-05-01T00:00:00Z2019-05info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/37465eng10.1016/j.jbi.2019.103154Trifan, AlinaOliveira, José Luísinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T12:12:24Zoai:ria.ua.pt:10773/37465Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:08:05.355292Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Patient data discovery platforms as enablers of biomedical and translational research: a systematic review
title Patient data discovery platforms as enablers of biomedical and translational research: a systematic review
spellingShingle Patient data discovery platforms as enablers of biomedical and translational research: a systematic review
Trifan, Alina
Biomedical data discovery
Discovery platforms
Data interoperability
Secondary use of data
Translational research
title_short Patient data discovery platforms as enablers of biomedical and translational research: a systematic review
title_full Patient data discovery platforms as enablers of biomedical and translational research: a systematic review
title_fullStr Patient data discovery platforms as enablers of biomedical and translational research: a systematic review
title_full_unstemmed Patient data discovery platforms as enablers of biomedical and translational research: a systematic review
title_sort Patient data discovery platforms as enablers of biomedical and translational research: a systematic review
author Trifan, Alina
author_facet Trifan, Alina
Oliveira, José Luís
author_role author
author2 Oliveira, José Luís
author2_role author
dc.contributor.author.fl_str_mv Trifan, Alina
Oliveira, José Luís
dc.subject.por.fl_str_mv Biomedical data discovery
Discovery platforms
Data interoperability
Secondary use of data
Translational research
topic Biomedical data discovery
Discovery platforms
Data interoperability
Secondary use of data
Translational research
description Background: The global shift from paper health records to electronic ones has led to an impressive growth of biomedical digital data along the past two decades. Exploring and extracting knowledge from these data has the potential to enhance translational research and lead to positive outcomes for the population’s health and healthcare. Obective: The aim of this study was to conduct a systematic review to identify software platforms that enable discovery, secondary use and interoperability of biomedical data. Additionally, we aim evaluating the identified solutions in terms of clinical interest and main healthcare-related outcomes. Methods: A systematic search of the scientific literature published and indexed in Pubmed between January 2014 and September 2018 was performed. Inclusion criteria were as follows: relevance for the topic of bio- medical data discovery, English language, and free full text. To increase the recall, we developed a semi-auto- matic and incremental methodology to retrieve articles that cite one or more of the previous set. Results: A total number of 500 candidate papers were retrieved through this methodology. Of these, 85 were eligible for abstract assessment. Finally, 37 studies qualified for a full-text review, and 20 provided enough information for the study objectives. Conclusions: This study revealed that biomedical discovery platforms are both a current necessity and a sig- nificantly innovative agent in the area of healthcare. The outcomes that were identified, in terms of scientific publications, clinical studies and research collaborations stand as evidence.
publishDate 2019
dc.date.none.fl_str_mv 2019-05-01T00:00:00Z
2019-05
2023-05-02T14:03:40Z
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url http://hdl.handle.net/10773/37465
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dc.relation.none.fl_str_mv 10.1016/j.jbi.2019.103154
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