Development of a new multiplex PCR to detect prevalent species of house dust mites in house dust

Detalhes bibliográficos
Autor(a) principal: Oliveira, Ana Sofia
Data de Publicação: 2022
Outros Autores: Gaspar, Carlos, Rolo, Joana, Pereira, Cristiana Costa, Palmeira-de-Oliveira, Rita, Teixeira, João Paulo, Martinez-de-Oliveira, José, Palmeira-de-Oliveira, Ana
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/8598
Resumo: Dermatophagoides pteronyssinus and Dermatophagoides farinae are the most common House Dust Mite (HDM) species in home environments worldwide and responsible for HDM allergy. Since the prevalence of HDM-related clinical conditions is linked to exposure to the mite itself, the detection of HDM in the human households gains importance. We aimed to develop a fast and accessible multiplex PCR to detect and distinguish two relevant HDM species in house dust. New primers were designed, and sensitivity analysis was performed. Sequencing of PCR products was also performed to confirm the method's specificity. The limit of detection of the multiplex PCR for both species was as low as 30 pg µL-1. The application of the multiplex PCR to dust samples also resulted in the identification of both species with high sensitivity. The protocol required small amount of template, reagents and a short reaction time thus presenting an alternative to classically used techniques for HDM identification.
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spelling Development of a new multiplex PCR to detect prevalent species of house dust mites in house dustDermatophagoidesDustMultiplex PCRHouse Dust MiteAllergensAr e Saúde OcupacionalDermatophagoides pteronyssinus and Dermatophagoides farinae are the most common House Dust Mite (HDM) species in home environments worldwide and responsible for HDM allergy. Since the prevalence of HDM-related clinical conditions is linked to exposure to the mite itself, the detection of HDM in the human households gains importance. We aimed to develop a fast and accessible multiplex PCR to detect and distinguish two relevant HDM species in house dust. New primers were designed, and sensitivity analysis was performed. Sequencing of PCR products was also performed to confirm the method's specificity. The limit of detection of the multiplex PCR for both species was as low as 30 pg µL-1. The application of the multiplex PCR to dust samples also resulted in the identification of both species with high sensitivity. The protocol required small amount of template, reagents and a short reaction time thus presenting an alternative to classically used techniques for HDM identification.This work was supported by the Foundation for Science and Technology (FCT), through funds from the State Budget, and by the European Regional Development Fund (ERDF), under the Portugal 2020 Program, through the Regional Operational Program of the Center (Centro2020), through the Project with the Grant [UIDB/00709/2020]. Financial support was also provided by the Foundation for Science and Technology (FCT) through a PhD fellowship to A.S.O under Grant [SFRH//BD/136192/2018].Taylor and FrancisRepositório Científico do Instituto Nacional de SaúdeOliveira, Ana SofiaGaspar, CarlosRolo, JoanaPereira, Cristiana CostaPalmeira-de-Oliveira, RitaTeixeira, João PauloMartinez-de-Oliveira, JoséPalmeira-de-Oliveira, Ana2023-03-22T11:28:16Z2022-072022-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/8598engInt J Environ Health Res. 2022 Jul;32(7):1500-1512. doi: 10.1080/09603123.2021.1893282. Epub 2021 Mar 8.0960-312310.1080/09603123.2021.1893282info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:42:39Zoai:repositorio.insa.pt:10400.18/8598Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:43:14.756200Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Development of a new multiplex PCR to detect prevalent species of house dust mites in house dust
title Development of a new multiplex PCR to detect prevalent species of house dust mites in house dust
spellingShingle Development of a new multiplex PCR to detect prevalent species of house dust mites in house dust
Oliveira, Ana Sofia
Dermatophagoides
Dust
Multiplex PCR
House Dust Mite
Allergens
Ar e Saúde Ocupacional
title_short Development of a new multiplex PCR to detect prevalent species of house dust mites in house dust
title_full Development of a new multiplex PCR to detect prevalent species of house dust mites in house dust
title_fullStr Development of a new multiplex PCR to detect prevalent species of house dust mites in house dust
title_full_unstemmed Development of a new multiplex PCR to detect prevalent species of house dust mites in house dust
title_sort Development of a new multiplex PCR to detect prevalent species of house dust mites in house dust
author Oliveira, Ana Sofia
author_facet Oliveira, Ana Sofia
Gaspar, Carlos
Rolo, Joana
Pereira, Cristiana Costa
Palmeira-de-Oliveira, Rita
Teixeira, João Paulo
Martinez-de-Oliveira, José
Palmeira-de-Oliveira, Ana
author_role author
author2 Gaspar, Carlos
Rolo, Joana
Pereira, Cristiana Costa
Palmeira-de-Oliveira, Rita
Teixeira, João Paulo
Martinez-de-Oliveira, José
Palmeira-de-Oliveira, Ana
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv Oliveira, Ana Sofia
Gaspar, Carlos
Rolo, Joana
Pereira, Cristiana Costa
Palmeira-de-Oliveira, Rita
Teixeira, João Paulo
Martinez-de-Oliveira, José
Palmeira-de-Oliveira, Ana
dc.subject.por.fl_str_mv Dermatophagoides
Dust
Multiplex PCR
House Dust Mite
Allergens
Ar e Saúde Ocupacional
topic Dermatophagoides
Dust
Multiplex PCR
House Dust Mite
Allergens
Ar e Saúde Ocupacional
description Dermatophagoides pteronyssinus and Dermatophagoides farinae are the most common House Dust Mite (HDM) species in home environments worldwide and responsible for HDM allergy. Since the prevalence of HDM-related clinical conditions is linked to exposure to the mite itself, the detection of HDM in the human households gains importance. We aimed to develop a fast and accessible multiplex PCR to detect and distinguish two relevant HDM species in house dust. New primers were designed, and sensitivity analysis was performed. Sequencing of PCR products was also performed to confirm the method's specificity. The limit of detection of the multiplex PCR for both species was as low as 30 pg µL-1. The application of the multiplex PCR to dust samples also resulted in the identification of both species with high sensitivity. The protocol required small amount of template, reagents and a short reaction time thus presenting an alternative to classically used techniques for HDM identification.
publishDate 2022
dc.date.none.fl_str_mv 2022-07
2022-07-01T00:00:00Z
2023-03-22T11:28:16Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/8598
url http://hdl.handle.net/10400.18/8598
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Int J Environ Health Res. 2022 Jul;32(7):1500-1512. doi: 10.1080/09603123.2021.1893282. Epub 2021 Mar 8.
0960-3123
10.1080/09603123.2021.1893282
dc.rights.driver.fl_str_mv info:eu-repo/semantics/embargoedAccess
eu_rights_str_mv embargoedAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Taylor and Francis
publisher.none.fl_str_mv Taylor and Francis
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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