Integrated in Silico and Experimental Approach towards the Design of a Novel Recombinant Protein Containing an Anti-HER2 scFv

Detalhes bibliográficos
Autor(a) principal: Santos, Joana
Data de Publicação: 2021
Outros Autores: Cardoso, Miguel, Moreira, Irina S., Gonçalves, João, Correia, João D. G., Verde, Sandra Cabo, Melo, Rita
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/104754
https://doi.org/10.3390/ijms22073547
Resumo: Biological therapies, such as recombinant proteins, are nowadays amongst the most promising approaches towards precision medicine. One of the most innovative methodologies currently available aimed at improving the production yield of recombinant proteins with minimization of costs relies on the combination of in silico studies to predict and deepen the understanding of the modified proteins with an experimental approach. The work described herein aims at the design and production of a biomimetic vector containing the single-chain variable domain fragment (scFv) of an anti-HER2 antibody fragment as a targeting motif fused with HIV gp41. Molecular modeling and docking studies were performed to develop the recombinant protein sequence. Subsequently, the DNA plasmid was produced and HEK-293T cells were transfected to evaluate the designed vector. The obtained results demonstrated that the plasmid construction is robust and can be expressed in the selected cell line. The multidisciplinary integrated in silico and experimental strategy adopted for the construction of a recombinant protein which can be used in HER2+-targeted therapy paves the way towards the production of other therapeutic proteins in a more cost-effective way.
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spelling Integrated in Silico and Experimental Approach towards the Design of a Novel Recombinant Protein Containing an Anti-HER2 scFvcell transfectionDNA plasmidhuman epidermal growth factor receptor 2molecular dockingrecombinant proteinComputer SimulationGenetic VectorsHEK293 CellsHIV Envelope Protein gp41HumansMolecular Docking SimulationProtein EngineeringRecombinant ProteinsSingle-Chain AntibodiesTrastuzumabBiological therapies, such as recombinant proteins, are nowadays amongst the most promising approaches towards precision medicine. One of the most innovative methodologies currently available aimed at improving the production yield of recombinant proteins with minimization of costs relies on the combination of in silico studies to predict and deepen the understanding of the modified proteins with an experimental approach. The work described herein aims at the design and production of a biomimetic vector containing the single-chain variable domain fragment (scFv) of an anti-HER2 antibody fragment as a targeting motif fused with HIV gp41. Molecular modeling and docking studies were performed to develop the recombinant protein sequence. Subsequently, the DNA plasmid was produced and HEK-293T cells were transfected to evaluate the designed vector. The obtained results demonstrated that the plasmid construction is robust and can be expressed in the selected cell line. The multidisciplinary integrated in silico and experimental strategy adopted for the construction of a recombinant protein which can be used in HER2+-targeted therapy paves the way towards the production of other therapeutic proteins in a more cost-effective way.MDPI AG2021-03-29info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/104754http://hdl.handle.net/10316/104754https://doi.org/10.3390/ijms22073547eng1422-0067Santos, JoanaCardoso, MiguelMoreira, Irina S.Gonçalves, JoãoCorreia, João D. G.Verde, Sandra CaboMelo, Ritainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-01-24T22:04:30Zoai:estudogeral.uc.pt:10316/104754Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:21:24.613221Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Integrated in Silico and Experimental Approach towards the Design of a Novel Recombinant Protein Containing an Anti-HER2 scFv
title Integrated in Silico and Experimental Approach towards the Design of a Novel Recombinant Protein Containing an Anti-HER2 scFv
spellingShingle Integrated in Silico and Experimental Approach towards the Design of a Novel Recombinant Protein Containing an Anti-HER2 scFv
Santos, Joana
cell transfection
DNA plasmid
human epidermal growth factor receptor 2
molecular docking
recombinant protein
Computer Simulation
Genetic Vectors
HEK293 Cells
HIV Envelope Protein gp41
Humans
Molecular Docking Simulation
Protein Engineering
Recombinant Proteins
Single-Chain Antibodies
Trastuzumab
title_short Integrated in Silico and Experimental Approach towards the Design of a Novel Recombinant Protein Containing an Anti-HER2 scFv
title_full Integrated in Silico and Experimental Approach towards the Design of a Novel Recombinant Protein Containing an Anti-HER2 scFv
title_fullStr Integrated in Silico and Experimental Approach towards the Design of a Novel Recombinant Protein Containing an Anti-HER2 scFv
title_full_unstemmed Integrated in Silico and Experimental Approach towards the Design of a Novel Recombinant Protein Containing an Anti-HER2 scFv
title_sort Integrated in Silico and Experimental Approach towards the Design of a Novel Recombinant Protein Containing an Anti-HER2 scFv
author Santos, Joana
author_facet Santos, Joana
Cardoso, Miguel
Moreira, Irina S.
Gonçalves, João
Correia, João D. G.
Verde, Sandra Cabo
Melo, Rita
author_role author
author2 Cardoso, Miguel
Moreira, Irina S.
Gonçalves, João
Correia, João D. G.
Verde, Sandra Cabo
Melo, Rita
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Santos, Joana
Cardoso, Miguel
Moreira, Irina S.
Gonçalves, João
Correia, João D. G.
Verde, Sandra Cabo
Melo, Rita
dc.subject.por.fl_str_mv cell transfection
DNA plasmid
human epidermal growth factor receptor 2
molecular docking
recombinant protein
Computer Simulation
Genetic Vectors
HEK293 Cells
HIV Envelope Protein gp41
Humans
Molecular Docking Simulation
Protein Engineering
Recombinant Proteins
Single-Chain Antibodies
Trastuzumab
topic cell transfection
DNA plasmid
human epidermal growth factor receptor 2
molecular docking
recombinant protein
Computer Simulation
Genetic Vectors
HEK293 Cells
HIV Envelope Protein gp41
Humans
Molecular Docking Simulation
Protein Engineering
Recombinant Proteins
Single-Chain Antibodies
Trastuzumab
description Biological therapies, such as recombinant proteins, are nowadays amongst the most promising approaches towards precision medicine. One of the most innovative methodologies currently available aimed at improving the production yield of recombinant proteins with minimization of costs relies on the combination of in silico studies to predict and deepen the understanding of the modified proteins with an experimental approach. The work described herein aims at the design and production of a biomimetic vector containing the single-chain variable domain fragment (scFv) of an anti-HER2 antibody fragment as a targeting motif fused with HIV gp41. Molecular modeling and docking studies were performed to develop the recombinant protein sequence. Subsequently, the DNA plasmid was produced and HEK-293T cells were transfected to evaluate the designed vector. The obtained results demonstrated that the plasmid construction is robust and can be expressed in the selected cell line. The multidisciplinary integrated in silico and experimental strategy adopted for the construction of a recombinant protein which can be used in HER2+-targeted therapy paves the way towards the production of other therapeutic proteins in a more cost-effective way.
publishDate 2021
dc.date.none.fl_str_mv 2021-03-29
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/104754
http://hdl.handle.net/10316/104754
https://doi.org/10.3390/ijms22073547
url http://hdl.handle.net/10316/104754
https://doi.org/10.3390/ijms22073547
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1422-0067
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv MDPI AG
publisher.none.fl_str_mv MDPI AG
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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