REST is a hypoxia-responsive transcriptional repressor
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.7/702 |
Resumo: | Cellular exposure to hypoxia results in altered gene expression in a range of physiologic and pathophysiologic states. Discrete cohorts of genes can be either up- or down-regulated in response to hypoxia. While the Hypoxia-Inducible Factor (HIF) is the primary driver of hypoxia-induced adaptive gene expression, less is known about the signalling mechanisms regulating hypoxia-dependent gene repression. Using RNA-seq, we demonstrate that equivalent numbers of genes are induced and repressed in human embryonic kidney (HEK293) cells. We demonstrate that nuclear localization of the Repressor Element 1-Silencing Transcription factor (REST) is induced in hypoxia and that REST is responsible for regulating approximately 20% of the hypoxia-repressed genes. Using chromatin immunoprecipitation assays we demonstrate that REST-dependent gene repression is at least in part mediated by direct binding to the promoters of target genes. Based on these data, we propose that REST is a key mediator of gene repression in hypoxia. |
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REST is a hypoxia-responsive transcriptional repressorGene silencingTranscriptional regulatory elementsCellular exposure to hypoxia results in altered gene expression in a range of physiologic and pathophysiologic states. Discrete cohorts of genes can be either up- or down-regulated in response to hypoxia. While the Hypoxia-Inducible Factor (HIF) is the primary driver of hypoxia-induced adaptive gene expression, less is known about the signalling mechanisms regulating hypoxia-dependent gene repression. Using RNA-seq, we demonstrate that equivalent numbers of genes are induced and repressed in human embryonic kidney (HEK293) cells. We demonstrate that nuclear localization of the Repressor Element 1-Silencing Transcription factor (REST) is induced in hypoxia and that REST is responsible for regulating approximately 20% of the hypoxia-repressed genes. Using chromatin immunoprecipitation assays we demonstrate that REST-dependent gene repression is at least in part mediated by direct binding to the promoters of target genes. Based on these data, we propose that REST is a key mediator of gene repression in hypoxia.Science Foundation Ireland grant: (06/CE/B1129).Nature Publishing GroupARCACavadas, Miguel A. S.Mesnieres, MarionCrifo, BiancaManresa, Mario C.Selfridge, Andrew C.Keogh, Ciara E.Fabian, ZsoltScholz, Carsten C.Nolan, Karen A.Rocha, Liliane M. A.Tambuwala, Murtaza M.Brown, StuartWdowicz, AnitaCorbett, DanielleMurphy, Keith J.Godson, CatherineCummins, Eoin P.Taylor, Cormac T.Cheong, Alex2016-10-18T14:21:34Z2016-08-172016-08-17T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfapplication/pdfhttp://hdl.handle.net/10400.7/702engCavadas, M. A. S. et al. REST is a hypoxia-responsive transcriptional repressor. Sci. Rep. 6, 31355; doi: 10.1038/srep31355 (2016).10.1038/srep31355info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:35:05Zoai:arca.igc.gulbenkian.pt:10400.7/702Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:56.090847Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
REST is a hypoxia-responsive transcriptional repressor |
title |
REST is a hypoxia-responsive transcriptional repressor |
spellingShingle |
REST is a hypoxia-responsive transcriptional repressor Cavadas, Miguel A. S. Gene silencing Transcriptional regulatory elements |
title_short |
REST is a hypoxia-responsive transcriptional repressor |
title_full |
REST is a hypoxia-responsive transcriptional repressor |
title_fullStr |
REST is a hypoxia-responsive transcriptional repressor |
title_full_unstemmed |
REST is a hypoxia-responsive transcriptional repressor |
title_sort |
REST is a hypoxia-responsive transcriptional repressor |
author |
Cavadas, Miguel A. S. |
author_facet |
Cavadas, Miguel A. S. Mesnieres, Marion Crifo, Bianca Manresa, Mario C. Selfridge, Andrew C. Keogh, Ciara E. Fabian, Zsolt Scholz, Carsten C. Nolan, Karen A. Rocha, Liliane M. A. Tambuwala, Murtaza M. Brown, Stuart Wdowicz, Anita Corbett, Danielle Murphy, Keith J. Godson, Catherine Cummins, Eoin P. Taylor, Cormac T. Cheong, Alex |
author_role |
author |
author2 |
Mesnieres, Marion Crifo, Bianca Manresa, Mario C. Selfridge, Andrew C. Keogh, Ciara E. Fabian, Zsolt Scholz, Carsten C. Nolan, Karen A. Rocha, Liliane M. A. Tambuwala, Murtaza M. Brown, Stuart Wdowicz, Anita Corbett, Danielle Murphy, Keith J. Godson, Catherine Cummins, Eoin P. Taylor, Cormac T. Cheong, Alex |
author2_role |
author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
ARCA |
dc.contributor.author.fl_str_mv |
Cavadas, Miguel A. S. Mesnieres, Marion Crifo, Bianca Manresa, Mario C. Selfridge, Andrew C. Keogh, Ciara E. Fabian, Zsolt Scholz, Carsten C. Nolan, Karen A. Rocha, Liliane M. A. Tambuwala, Murtaza M. Brown, Stuart Wdowicz, Anita Corbett, Danielle Murphy, Keith J. Godson, Catherine Cummins, Eoin P. Taylor, Cormac T. Cheong, Alex |
dc.subject.por.fl_str_mv |
Gene silencing Transcriptional regulatory elements |
topic |
Gene silencing Transcriptional regulatory elements |
description |
Cellular exposure to hypoxia results in altered gene expression in a range of physiologic and pathophysiologic states. Discrete cohorts of genes can be either up- or down-regulated in response to hypoxia. While the Hypoxia-Inducible Factor (HIF) is the primary driver of hypoxia-induced adaptive gene expression, less is known about the signalling mechanisms regulating hypoxia-dependent gene repression. Using RNA-seq, we demonstrate that equivalent numbers of genes are induced and repressed in human embryonic kidney (HEK293) cells. We demonstrate that nuclear localization of the Repressor Element 1-Silencing Transcription factor (REST) is induced in hypoxia and that REST is responsible for regulating approximately 20% of the hypoxia-repressed genes. Using chromatin immunoprecipitation assays we demonstrate that REST-dependent gene repression is at least in part mediated by direct binding to the promoters of target genes. Based on these data, we propose that REST is a key mediator of gene repression in hypoxia. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-10-18T14:21:34Z 2016-08-17 2016-08-17T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.7/702 |
url |
http://hdl.handle.net/10400.7/702 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Cavadas, M. A. S. et al. REST is a hypoxia-responsive transcriptional repressor. Sci. Rep. 6, 31355; doi: 10.1038/srep31355 (2016). 10.1038/srep31355 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Nature Publishing Group |
publisher.none.fl_str_mv |
Nature Publishing Group |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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1799130574717190144 |