Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?

Detalhes bibliográficos
Autor(a) principal: Graham, EB
Data de Publicação: 2016
Outros Autores: Knelman, JE, Schindlbacher, A, Siciliano, S, Breulmann, M, Yannarell, A, Bemans, JM, Abell, G, Philippot, L, Prosser, J, Foulquier, A, Yuste, JC, Glanville, HC, Jones, DL, Angel, F, Salminen, J, Newton, RJ, Buergmann, H, Ingram, LJ, Hamer, U, Siljanen, HMP, Peltoniemi, K, Potthast, K, Baneras, L, Hartmann, M, Banerjee, S, Yu, RQ, Nogaro, G, Richter, A, Koranda, M, Castle, SC, Goberna, M, Song, B, Chatterjee, A, Olga C Nunes, Ana Rita Lopes, Cao, YP, Kaisermann, A, Hallin, S, Strickland, MS, Garcia Pausas, J, Barba, J, Kang, H, Isobe, K, Papaspyrou, S, Pastorelli, R, Lagomarsino, A, Lindstrom, ES, Basiliko, N, Nemergut, DR
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://repositorio-aberto.up.pt/handle/10216/103251
Resumo: Microorganisms are vital in mediating the earth's biogeochemical cycles; yet, despite our rapidly increasing ability to explore complex environmental microbial communities, the relationship between microbial community structure and ecosystem processes remains poorly understood. Here, we address a fundamental and unanswered question in microbial ecology: 'When do we need to understand microbial community structure to accurately predict function?' We present a statistical analysis investigating the value of environmental data and microbial community structure independently and in combination for explaining rates of carbon and nitrogen cycling processes within 82 global datasets. Environmental variables were the strongest predictors of process rates but left 44% of variation unexplained on average, suggesting the potential for microbial data to increase model accuracy. Although only 29% of our datasets were significantly improved by adding information on microbial community structure, we observed improvement in models of processes mediated by narrow phylogenetic guilds via functional gene data, and conversely, improvement in models of facultative microbial processes via community diversity metrics. Our results also suggest that microbial diversity can strengthen predictions of respiration rates beyond microbial biomass parameters, as 53% of models were improved by incorporating both sets of predictors compared to 35% by microbial biomass alone. Our analysis represents the first comprehensive analysis of research examining links between microbial community structure and ecosystem function. Taken together, our results indicate that a greater understanding of microbial communities informed by ecological principles may enhance our ability to predict ecosystem process rates relative to assessments based on environmental variables and microbial physiology.
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spelling Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?Microorganisms are vital in mediating the earth's biogeochemical cycles; yet, despite our rapidly increasing ability to explore complex environmental microbial communities, the relationship between microbial community structure and ecosystem processes remains poorly understood. Here, we address a fundamental and unanswered question in microbial ecology: 'When do we need to understand microbial community structure to accurately predict function?' We present a statistical analysis investigating the value of environmental data and microbial community structure independently and in combination for explaining rates of carbon and nitrogen cycling processes within 82 global datasets. Environmental variables were the strongest predictors of process rates but left 44% of variation unexplained on average, suggesting the potential for microbial data to increase model accuracy. Although only 29% of our datasets were significantly improved by adding information on microbial community structure, we observed improvement in models of processes mediated by narrow phylogenetic guilds via functional gene data, and conversely, improvement in models of facultative microbial processes via community diversity metrics. Our results also suggest that microbial diversity can strengthen predictions of respiration rates beyond microbial biomass parameters, as 53% of models were improved by incorporating both sets of predictors compared to 35% by microbial biomass alone. Our analysis represents the first comprehensive analysis of research examining links between microbial community structure and ecosystem function. Taken together, our results indicate that a greater understanding of microbial communities informed by ecological principles may enhance our ability to predict ecosystem process rates relative to assessments based on environmental variables and microbial physiology.20162016-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://repositorio-aberto.up.pt/handle/10216/103251eng10.3389/fmicb.2016.00214Graham, EBKnelman, JESchindlbacher, ASiciliano, SBreulmann, MYannarell, ABemans, JMAbell, GPhilippot, LProsser, JFoulquier, AYuste, JCGlanville, HCJones, DLAngel, FSalminen, JNewton, RJBuergmann, HIngram, LJHamer, USiljanen, HMPPeltoniemi, KPotthast, KBaneras, LHartmann, MBanerjee, SYu, RQNogaro, GRichter, AKoranda, MCastle, SCGoberna, MSong, BChatterjee, AOlga C NunesAna Rita LopesCao, YPKaisermann, AHallin, SStrickland, MSGarcia Pausas, JBarba, JKang, HIsobe, KPapaspyrou, SPastorelli, RLagomarsino, ALindstrom, ESBasiliko, NNemergut, DRinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T14:19:21Zoai:repositorio-aberto.up.pt:10216/103251Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:58:51.468492Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?
title Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?
spellingShingle Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?
Graham, EB
title_short Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?
title_full Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?
title_fullStr Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?
title_full_unstemmed Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?
title_sort Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?
author Graham, EB
author_facet Graham, EB
Knelman, JE
Schindlbacher, A
Siciliano, S
Breulmann, M
Yannarell, A
Bemans, JM
Abell, G
Philippot, L
Prosser, J
Foulquier, A
Yuste, JC
Glanville, HC
Jones, DL
Angel, F
Salminen, J
Newton, RJ
Buergmann, H
Ingram, LJ
Hamer, U
Siljanen, HMP
Peltoniemi, K
Potthast, K
Baneras, L
Hartmann, M
Banerjee, S
Yu, RQ
Nogaro, G
Richter, A
Koranda, M
Castle, SC
Goberna, M
Song, B
Chatterjee, A
Olga C Nunes
Ana Rita Lopes
Cao, YP
Kaisermann, A
Hallin, S
Strickland, MS
Garcia Pausas, J
Barba, J
Kang, H
Isobe, K
Papaspyrou, S
Pastorelli, R
Lagomarsino, A
Lindstrom, ES
Basiliko, N
Nemergut, DR
author_role author
author2 Knelman, JE
Schindlbacher, A
Siciliano, S
Breulmann, M
Yannarell, A
Bemans, JM
Abell, G
Philippot, L
Prosser, J
Foulquier, A
Yuste, JC
Glanville, HC
Jones, DL
Angel, F
Salminen, J
Newton, RJ
Buergmann, H
Ingram, LJ
Hamer, U
Siljanen, HMP
Peltoniemi, K
Potthast, K
Baneras, L
Hartmann, M
Banerjee, S
Yu, RQ
Nogaro, G
Richter, A
Koranda, M
Castle, SC
Goberna, M
Song, B
Chatterjee, A
Olga C Nunes
Ana Rita Lopes
Cao, YP
Kaisermann, A
Hallin, S
Strickland, MS
Garcia Pausas, J
Barba, J
Kang, H
Isobe, K
Papaspyrou, S
Pastorelli, R
Lagomarsino, A
Lindstrom, ES
Basiliko, N
Nemergut, DR
author2_role author
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author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
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dc.contributor.author.fl_str_mv Graham, EB
Knelman, JE
Schindlbacher, A
Siciliano, S
Breulmann, M
Yannarell, A
Bemans, JM
Abell, G
Philippot, L
Prosser, J
Foulquier, A
Yuste, JC
Glanville, HC
Jones, DL
Angel, F
Salminen, J
Newton, RJ
Buergmann, H
Ingram, LJ
Hamer, U
Siljanen, HMP
Peltoniemi, K
Potthast, K
Baneras, L
Hartmann, M
Banerjee, S
Yu, RQ
Nogaro, G
Richter, A
Koranda, M
Castle, SC
Goberna, M
Song, B
Chatterjee, A
Olga C Nunes
Ana Rita Lopes
Cao, YP
Kaisermann, A
Hallin, S
Strickland, MS
Garcia Pausas, J
Barba, J
Kang, H
Isobe, K
Papaspyrou, S
Pastorelli, R
Lagomarsino, A
Lindstrom, ES
Basiliko, N
Nemergut, DR
description Microorganisms are vital in mediating the earth's biogeochemical cycles; yet, despite our rapidly increasing ability to explore complex environmental microbial communities, the relationship between microbial community structure and ecosystem processes remains poorly understood. Here, we address a fundamental and unanswered question in microbial ecology: 'When do we need to understand microbial community structure to accurately predict function?' We present a statistical analysis investigating the value of environmental data and microbial community structure independently and in combination for explaining rates of carbon and nitrogen cycling processes within 82 global datasets. Environmental variables were the strongest predictors of process rates but left 44% of variation unexplained on average, suggesting the potential for microbial data to increase model accuracy. Although only 29% of our datasets were significantly improved by adding information on microbial community structure, we observed improvement in models of processes mediated by narrow phylogenetic guilds via functional gene data, and conversely, improvement in models of facultative microbial processes via community diversity metrics. Our results also suggest that microbial diversity can strengthen predictions of respiration rates beyond microbial biomass parameters, as 53% of models were improved by incorporating both sets of predictors compared to 35% by microbial biomass alone. Our analysis represents the first comprehensive analysis of research examining links between microbial community structure and ecosystem function. Taken together, our results indicate that a greater understanding of microbial communities informed by ecological principles may enhance our ability to predict ecosystem process rates relative to assessments based on environmental variables and microbial physiology.
publishDate 2016
dc.date.none.fl_str_mv 2016
2016-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio-aberto.up.pt/handle/10216/103251
url https://repositorio-aberto.up.pt/handle/10216/103251
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.3389/fmicb.2016.00214
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