Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands

Detalhes bibliográficos
Autor(a) principal: Gómez-Villegas, Patricia
Data de Publicação: 2021
Outros Autores: Vigara, Javier, Romero, Luis, Gotor, Cecilia, Raposo, Sara, Gonçalves, Brígida, Léon, Rosa
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/15442
Resumo: Alpha-amylases are a large family of α,1-4-endo-glycosyl hydrolases distributed in all kingdoms of life. The need for poly-extremotolerant amylases encouraged their search in extreme environments, where archaea become ideal candidates to provide new enzymes that are able to work in the harsh conditions demanded in many industrial applications. In this study, a collection of haloarchaea isolated from Odiel saltern ponds in the southwest of Spain was screened for their amylase activity. The strain that exhibited the highest activity was selected and identified as Haloarcula sp. HS. We demonstrated the existence in both, cellular and extracellular extracts of the new strain, of functional α-amylase activities, which showed to be moderately thermotolerant (optimum around 60 ◦C), extremely halotolerant (optimum over 25% NaCl), and calcium-dependent. The tryptic digestion followed by HPLC-MS/MS analysis of the partially purified cellular and extracellular extracts allowed to identify the sequence of three alpha-amylases, which despite sharing a low sequence identity, exhibited high three-dimensional structure homology, conserving the typical domains and most of the key consensus residues of α-amylases. Moreover, we proved the potential of the extracellular α-amylase from Haloarcula sp. HS to treat bakery wastes under high salinity conditions.
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spelling Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel MarshlandsAmylaseExtremozymesHaloarchaeaEnzymatic characterizationProteomicsAlpha-amylases are a large family of α,1-4-endo-glycosyl hydrolases distributed in all kingdoms of life. The need for poly-extremotolerant amylases encouraged their search in extreme environments, where archaea become ideal candidates to provide new enzymes that are able to work in the harsh conditions demanded in many industrial applications. In this study, a collection of haloarchaea isolated from Odiel saltern ponds in the southwest of Spain was screened for their amylase activity. The strain that exhibited the highest activity was selected and identified as Haloarcula sp. HS. We demonstrated the existence in both, cellular and extracellular extracts of the new strain, of functional α-amylase activities, which showed to be moderately thermotolerant (optimum around 60 ◦C), extremely halotolerant (optimum over 25% NaCl), and calcium-dependent. The tryptic digestion followed by HPLC-MS/MS analysis of the partially purified cellular and extracellular extracts allowed to identify the sequence of three alpha-amylases, which despite sharing a low sequence identity, exhibited high three-dimensional structure homology, conserving the typical domains and most of the key consensus residues of α-amylases. Moreover, we proved the potential of the extracellular α-amylase from Haloarcula sp. HS to treat bakery wastes under high salinity conditions.PID2019-109785GB-I00, PID2019-110438RB-C22 -AEI/FEDER, EPIT 2016-17, P18-RT-3154MDPISapientiaGómez-Villegas, PatriciaVigara, JavierRomero, LuisGotor, CeciliaRaposo, SaraGonçalves, BrígidaLéon, Rosa2021-04-26T10:09:28Z2021-04-162021-04-23T13:31:39Z2021-04-16T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/15442engBiology 10 (4): 337 (2021)10.3390/biology100403372079-7737info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:27:51Zoai:sapientia.ualg.pt:10400.1/15442Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:06:16.284075Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands
title Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands
spellingShingle Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands
Gómez-Villegas, Patricia
Amylase
Extremozymes
Haloarchaea
Enzymatic characterization
Proteomics
title_short Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands
title_full Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands
title_fullStr Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands
title_full_unstemmed Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands
title_sort Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands
author Gómez-Villegas, Patricia
author_facet Gómez-Villegas, Patricia
Vigara, Javier
Romero, Luis
Gotor, Cecilia
Raposo, Sara
Gonçalves, Brígida
Léon, Rosa
author_role author
author2 Vigara, Javier
Romero, Luis
Gotor, Cecilia
Raposo, Sara
Gonçalves, Brígida
Léon, Rosa
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Gómez-Villegas, Patricia
Vigara, Javier
Romero, Luis
Gotor, Cecilia
Raposo, Sara
Gonçalves, Brígida
Léon, Rosa
dc.subject.por.fl_str_mv Amylase
Extremozymes
Haloarchaea
Enzymatic characterization
Proteomics
topic Amylase
Extremozymes
Haloarchaea
Enzymatic characterization
Proteomics
description Alpha-amylases are a large family of α,1-4-endo-glycosyl hydrolases distributed in all kingdoms of life. The need for poly-extremotolerant amylases encouraged their search in extreme environments, where archaea become ideal candidates to provide new enzymes that are able to work in the harsh conditions demanded in many industrial applications. In this study, a collection of haloarchaea isolated from Odiel saltern ponds in the southwest of Spain was screened for their amylase activity. The strain that exhibited the highest activity was selected and identified as Haloarcula sp. HS. We demonstrated the existence in both, cellular and extracellular extracts of the new strain, of functional α-amylase activities, which showed to be moderately thermotolerant (optimum around 60 ◦C), extremely halotolerant (optimum over 25% NaCl), and calcium-dependent. The tryptic digestion followed by HPLC-MS/MS analysis of the partially purified cellular and extracellular extracts allowed to identify the sequence of three alpha-amylases, which despite sharing a low sequence identity, exhibited high three-dimensional structure homology, conserving the typical domains and most of the key consensus residues of α-amylases. Moreover, we proved the potential of the extracellular α-amylase from Haloarcula sp. HS to treat bakery wastes under high salinity conditions.
publishDate 2021
dc.date.none.fl_str_mv 2021-04-26T10:09:28Z
2021-04-16
2021-04-23T13:31:39Z
2021-04-16T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/15442
url http://hdl.handle.net/10400.1/15442
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Biology 10 (4): 337 (2021)
10.3390/biology10040337
2079-7737
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
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publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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