Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.1/15442 |
Resumo: | Alpha-amylases are a large family of α,1-4-endo-glycosyl hydrolases distributed in all kingdoms of life. The need for poly-extremotolerant amylases encouraged their search in extreme environments, where archaea become ideal candidates to provide new enzymes that are able to work in the harsh conditions demanded in many industrial applications. In this study, a collection of haloarchaea isolated from Odiel saltern ponds in the southwest of Spain was screened for their amylase activity. The strain that exhibited the highest activity was selected and identified as Haloarcula sp. HS. We demonstrated the existence in both, cellular and extracellular extracts of the new strain, of functional α-amylase activities, which showed to be moderately thermotolerant (optimum around 60 ◦C), extremely halotolerant (optimum over 25% NaCl), and calcium-dependent. The tryptic digestion followed by HPLC-MS/MS analysis of the partially purified cellular and extracellular extracts allowed to identify the sequence of three alpha-amylases, which despite sharing a low sequence identity, exhibited high three-dimensional structure homology, conserving the typical domains and most of the key consensus residues of α-amylases. Moreover, we proved the potential of the extracellular α-amylase from Haloarcula sp. HS to treat bakery wastes under high salinity conditions. |
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Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel MarshlandsAmylaseExtremozymesHaloarchaeaEnzymatic characterizationProteomicsAlpha-amylases are a large family of α,1-4-endo-glycosyl hydrolases distributed in all kingdoms of life. The need for poly-extremotolerant amylases encouraged their search in extreme environments, where archaea become ideal candidates to provide new enzymes that are able to work in the harsh conditions demanded in many industrial applications. In this study, a collection of haloarchaea isolated from Odiel saltern ponds in the southwest of Spain was screened for their amylase activity. The strain that exhibited the highest activity was selected and identified as Haloarcula sp. HS. We demonstrated the existence in both, cellular and extracellular extracts of the new strain, of functional α-amylase activities, which showed to be moderately thermotolerant (optimum around 60 ◦C), extremely halotolerant (optimum over 25% NaCl), and calcium-dependent. The tryptic digestion followed by HPLC-MS/MS analysis of the partially purified cellular and extracellular extracts allowed to identify the sequence of three alpha-amylases, which despite sharing a low sequence identity, exhibited high three-dimensional structure homology, conserving the typical domains and most of the key consensus residues of α-amylases. Moreover, we proved the potential of the extracellular α-amylase from Haloarcula sp. HS to treat bakery wastes under high salinity conditions.PID2019-109785GB-I00, PID2019-110438RB-C22 -AEI/FEDER, EPIT 2016-17, P18-RT-3154MDPISapientiaGómez-Villegas, PatriciaVigara, JavierRomero, LuisGotor, CeciliaRaposo, SaraGonçalves, BrígidaLéon, Rosa2021-04-26T10:09:28Z2021-04-162021-04-23T13:31:39Z2021-04-16T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/15442engBiology 10 (4): 337 (2021)10.3390/biology100403372079-7737info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:27:51Zoai:sapientia.ualg.pt:10400.1/15442Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:06:16.284075Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands |
title |
Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands |
spellingShingle |
Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands Gómez-Villegas, Patricia Amylase Extremozymes Haloarchaea Enzymatic characterization Proteomics |
title_short |
Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands |
title_full |
Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands |
title_fullStr |
Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands |
title_full_unstemmed |
Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands |
title_sort |
Biochemical characterization of the amylase activity from the New Haloarchaeal Strain Haloarcula sp. HS isolated in the Odiel Marshlands |
author |
Gómez-Villegas, Patricia |
author_facet |
Gómez-Villegas, Patricia Vigara, Javier Romero, Luis Gotor, Cecilia Raposo, Sara Gonçalves, Brígida Léon, Rosa |
author_role |
author |
author2 |
Vigara, Javier Romero, Luis Gotor, Cecilia Raposo, Sara Gonçalves, Brígida Léon, Rosa |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Sapientia |
dc.contributor.author.fl_str_mv |
Gómez-Villegas, Patricia Vigara, Javier Romero, Luis Gotor, Cecilia Raposo, Sara Gonçalves, Brígida Léon, Rosa |
dc.subject.por.fl_str_mv |
Amylase Extremozymes Haloarchaea Enzymatic characterization Proteomics |
topic |
Amylase Extremozymes Haloarchaea Enzymatic characterization Proteomics |
description |
Alpha-amylases are a large family of α,1-4-endo-glycosyl hydrolases distributed in all kingdoms of life. The need for poly-extremotolerant amylases encouraged their search in extreme environments, where archaea become ideal candidates to provide new enzymes that are able to work in the harsh conditions demanded in many industrial applications. In this study, a collection of haloarchaea isolated from Odiel saltern ponds in the southwest of Spain was screened for their amylase activity. The strain that exhibited the highest activity was selected and identified as Haloarcula sp. HS. We demonstrated the existence in both, cellular and extracellular extracts of the new strain, of functional α-amylase activities, which showed to be moderately thermotolerant (optimum around 60 ◦C), extremely halotolerant (optimum over 25% NaCl), and calcium-dependent. The tryptic digestion followed by HPLC-MS/MS analysis of the partially purified cellular and extracellular extracts allowed to identify the sequence of three alpha-amylases, which despite sharing a low sequence identity, exhibited high three-dimensional structure homology, conserving the typical domains and most of the key consensus residues of α-amylases. Moreover, we proved the potential of the extracellular α-amylase from Haloarcula sp. HS to treat bakery wastes under high salinity conditions. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-04-26T10:09:28Z 2021-04-16 2021-04-23T13:31:39Z 2021-04-16T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.1/15442 |
url |
http://hdl.handle.net/10400.1/15442 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Biology 10 (4): 337 (2021) 10.3390/biology10040337 2079-7737 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
MDPI |
publisher.none.fl_str_mv |
MDPI |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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1799133303642521600 |