Accuracy of oil palm root length measuring methods
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://scielo.pt/scielo.php?script=sci_arttext&pid=S0871-018X2020000100081 |
Resumo: | Abstract Length is an important variable to describe root architecture and growth, but root length (RL) measurement is extremely laborious and time-consuming. Image analysis methods can provide reliable and fast RL estimates; such tools have not been applied for oil palm, a globally relevant commodity. We tested two image analysis softwares (Safira and ImageJ) and the modified line-intersect method to estimate oil palm RL. We considered the manual measurement of RL as reference to infer about the accuracy of the image analysis and line-intersect methods. We sampled roots in an 10-yr-old oil palm plantation in eastern Amazon. We used the estimates from the image analysis to calculate a correction factor that was further applied to improve the RL estimates. We applied the Paired sample t-test (p<0.05) to separately test the original and corrected estimates of each method in relation to the reference. Although the original RL estimates of the image analysis and line-intersect showed limited accuracy, the correction factors improved the estimates of RL for ImageJ. We conclude that the ImageJ software is sufficiently accurate to estimate oil palm root length when specific root diameter correction factors are applied. |
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Accuracy of oil palm root length measuring methodsElaeis guineensisimage analysisImageJline-intersect methodSafiraAbstract Length is an important variable to describe root architecture and growth, but root length (RL) measurement is extremely laborious and time-consuming. Image analysis methods can provide reliable and fast RL estimates; such tools have not been applied for oil palm, a globally relevant commodity. We tested two image analysis softwares (Safira and ImageJ) and the modified line-intersect method to estimate oil palm RL. We considered the manual measurement of RL as reference to infer about the accuracy of the image analysis and line-intersect methods. We sampled roots in an 10-yr-old oil palm plantation in eastern Amazon. We used the estimates from the image analysis to calculate a correction factor that was further applied to improve the RL estimates. We applied the Paired sample t-test (p<0.05) to separately test the original and corrected estimates of each method in relation to the reference. Although the original RL estimates of the image analysis and line-intersect showed limited accuracy, the correction factors improved the estimates of RL for ImageJ. We conclude that the ImageJ software is sufficiently accurate to estimate oil palm root length when specific root diameter correction factors are applied.Sociedade de Ciências Agrárias de Portugal2020-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articletext/htmlhttp://scielo.pt/scielo.php?script=sci_arttext&pid=S0871-018X2020000100081Revista de Ciências Agrárias v.43 n.1 2020reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAPenghttp://scielo.pt/scielo.php?script=sci_arttext&pid=S0871-018X2020000100081Glória,Gerson C. P.Amador,Juciene T.Vasconcelos,Steel S.info:eu-repo/semantics/openAccess2024-02-06T17:02:49Zoai:scielo:S0871-018X2020000100081Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T02:17:43.786562Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Accuracy of oil palm root length measuring methods |
title |
Accuracy of oil palm root length measuring methods |
spellingShingle |
Accuracy of oil palm root length measuring methods Glória,Gerson C. P. Elaeis guineensis image analysis ImageJ line-intersect method Safira |
title_short |
Accuracy of oil palm root length measuring methods |
title_full |
Accuracy of oil palm root length measuring methods |
title_fullStr |
Accuracy of oil palm root length measuring methods |
title_full_unstemmed |
Accuracy of oil palm root length measuring methods |
title_sort |
Accuracy of oil palm root length measuring methods |
author |
Glória,Gerson C. P. |
author_facet |
Glória,Gerson C. P. Amador,Juciene T. Vasconcelos,Steel S. |
author_role |
author |
author2 |
Amador,Juciene T. Vasconcelos,Steel S. |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Glória,Gerson C. P. Amador,Juciene T. Vasconcelos,Steel S. |
dc.subject.por.fl_str_mv |
Elaeis guineensis image analysis ImageJ line-intersect method Safira |
topic |
Elaeis guineensis image analysis ImageJ line-intersect method Safira |
description |
Abstract Length is an important variable to describe root architecture and growth, but root length (RL) measurement is extremely laborious and time-consuming. Image analysis methods can provide reliable and fast RL estimates; such tools have not been applied for oil palm, a globally relevant commodity. We tested two image analysis softwares (Safira and ImageJ) and the modified line-intersect method to estimate oil palm RL. We considered the manual measurement of RL as reference to infer about the accuracy of the image analysis and line-intersect methods. We sampled roots in an 10-yr-old oil palm plantation in eastern Amazon. We used the estimates from the image analysis to calculate a correction factor that was further applied to improve the RL estimates. We applied the Paired sample t-test (p<0.05) to separately test the original and corrected estimates of each method in relation to the reference. Although the original RL estimates of the image analysis and line-intersect showed limited accuracy, the correction factors improved the estimates of RL for ImageJ. We conclude that the ImageJ software is sufficiently accurate to estimate oil palm root length when specific root diameter correction factors are applied. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-03-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://scielo.pt/scielo.php?script=sci_arttext&pid=S0871-018X2020000100081 |
url |
http://scielo.pt/scielo.php?script=sci_arttext&pid=S0871-018X2020000100081 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
http://scielo.pt/scielo.php?script=sci_arttext&pid=S0871-018X2020000100081 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade de Ciências Agrárias de Portugal |
publisher.none.fl_str_mv |
Sociedade de Ciências Agrárias de Portugal |
dc.source.none.fl_str_mv |
Revista de Ciências Agrárias v.43 n.1 2020 reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1799137270295429120 |