Accuracy of oil palm root length measuring methods

Detalhes bibliográficos
Autor(a) principal: Glória,Gerson C. P.
Data de Publicação: 2020
Outros Autores: Amador,Juciene T., Vasconcelos,Steel S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://scielo.pt/scielo.php?script=sci_arttext&pid=S0871-018X2020000100081
Resumo: Abstract Length is an important variable to describe root architecture and growth, but root length (RL) measurement is extremely laborious and time-consuming. Image analysis methods can provide reliable and fast RL estimates; such tools have not been applied for oil palm, a globally relevant commodity. We tested two image analysis softwares (Safira and ImageJ) and the modified line-intersect method to estimate oil palm RL. We considered the manual measurement of RL as reference to infer about the accuracy of the image analysis and line-intersect methods. We sampled roots in an 10-yr-old oil palm plantation in eastern Amazon. We used the estimates from the image analysis to calculate a correction factor that was further applied to improve the RL estimates. We applied the Paired sample t-test (p<0.05) to separately test the original and corrected estimates of each method in relation to the reference. Although the original RL estimates of the image analysis and line-intersect showed limited accuracy, the correction factors improved the estimates of RL for ImageJ. We conclude that the ImageJ software is sufficiently accurate to estimate oil palm root length when specific root diameter correction factors are applied.
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spelling Accuracy of oil palm root length measuring methodsElaeis guineensisimage analysisImageJline-intersect methodSafiraAbstract Length is an important variable to describe root architecture and growth, but root length (RL) measurement is extremely laborious and time-consuming. Image analysis methods can provide reliable and fast RL estimates; such tools have not been applied for oil palm, a globally relevant commodity. We tested two image analysis softwares (Safira and ImageJ) and the modified line-intersect method to estimate oil palm RL. We considered the manual measurement of RL as reference to infer about the accuracy of the image analysis and line-intersect methods. We sampled roots in an 10-yr-old oil palm plantation in eastern Amazon. We used the estimates from the image analysis to calculate a correction factor that was further applied to improve the RL estimates. We applied the Paired sample t-test (p<0.05) to separately test the original and corrected estimates of each method in relation to the reference. Although the original RL estimates of the image analysis and line-intersect showed limited accuracy, the correction factors improved the estimates of RL for ImageJ. We conclude that the ImageJ software is sufficiently accurate to estimate oil palm root length when specific root diameter correction factors are applied.Sociedade de Ciências Agrárias de Portugal2020-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articletext/htmlhttp://scielo.pt/scielo.php?script=sci_arttext&pid=S0871-018X2020000100081Revista de Ciências Agrárias v.43 n.1 2020reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAPenghttp://scielo.pt/scielo.php?script=sci_arttext&pid=S0871-018X2020000100081Glória,Gerson C. P.Amador,Juciene T.Vasconcelos,Steel S.info:eu-repo/semantics/openAccess2024-02-06T17:02:49Zoai:scielo:S0871-018X2020000100081Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T02:17:43.786562Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Accuracy of oil palm root length measuring methods
title Accuracy of oil palm root length measuring methods
spellingShingle Accuracy of oil palm root length measuring methods
Glória,Gerson C. P.
Elaeis guineensis
image analysis
ImageJ
line-intersect method
Safira
title_short Accuracy of oil palm root length measuring methods
title_full Accuracy of oil palm root length measuring methods
title_fullStr Accuracy of oil palm root length measuring methods
title_full_unstemmed Accuracy of oil palm root length measuring methods
title_sort Accuracy of oil palm root length measuring methods
author Glória,Gerson C. P.
author_facet Glória,Gerson C. P.
Amador,Juciene T.
Vasconcelos,Steel S.
author_role author
author2 Amador,Juciene T.
Vasconcelos,Steel S.
author2_role author
author
dc.contributor.author.fl_str_mv Glória,Gerson C. P.
Amador,Juciene T.
Vasconcelos,Steel S.
dc.subject.por.fl_str_mv Elaeis guineensis
image analysis
ImageJ
line-intersect method
Safira
topic Elaeis guineensis
image analysis
ImageJ
line-intersect method
Safira
description Abstract Length is an important variable to describe root architecture and growth, but root length (RL) measurement is extremely laborious and time-consuming. Image analysis methods can provide reliable and fast RL estimates; such tools have not been applied for oil palm, a globally relevant commodity. We tested two image analysis softwares (Safira and ImageJ) and the modified line-intersect method to estimate oil palm RL. We considered the manual measurement of RL as reference to infer about the accuracy of the image analysis and line-intersect methods. We sampled roots in an 10-yr-old oil palm plantation in eastern Amazon. We used the estimates from the image analysis to calculate a correction factor that was further applied to improve the RL estimates. We applied the Paired sample t-test (p<0.05) to separately test the original and corrected estimates of each method in relation to the reference. Although the original RL estimates of the image analysis and line-intersect showed limited accuracy, the correction factors improved the estimates of RL for ImageJ. We conclude that the ImageJ software is sufficiently accurate to estimate oil palm root length when specific root diameter correction factors are applied.
publishDate 2020
dc.date.none.fl_str_mv 2020-03-01
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dc.publisher.none.fl_str_mv Sociedade de Ciências Agrárias de Portugal
publisher.none.fl_str_mv Sociedade de Ciências Agrárias de Portugal
dc.source.none.fl_str_mv Revista de Ciências Agrárias v.43 n.1 2020
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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