Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L.

Detalhes bibliográficos
Autor(a) principal: Cardoso, Hélia
Data de Publicação: 2022
Outros Autores: Campos, Catarina, Grzebelus, Dariusz, Egas, Conceição, Peixe, Augusto
Tipo de documento: Artigo
Idioma: por
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10174/35101
https://doi.org/doi.org/10.3390/biology11071040
Resumo: The PIN-FORMED (PIN) proteins represent the most important polar auxin transporters in plants. Here, we characterized the PIN gene family in two olive genotypes, the Olea europaea subsp. europaea var. sylvestris and the var. europaea (cv. ‘Farga’). Twelve and 17 PIN genes were identified for vars. sylvestris and europaea, respectively, being distributed across 6 subfamilies. Genes encoding canonical OePINs consist of six exons, while genes encoding non-canonical OePINs are composed of five exons, with implications at protein specificities and functionality. A copia-LTR retrotransposon located in intron 4 of OePIN2b of var. europaea and the exaptation of partial sequences of that element as exons of the OePIN2b of var. sylvestris reveals such kind of event as a driving force in the olive PIN evolution. RNA-seq data showed that members from the subfamilies 1, 2, and 3 responded to abiotic and biotic stress factors. Co-expression of OePINs with genes involved in stress signaling and oxidative stress homeostasis were identified. This study highlights the importance of PIN genes on stress responses, contributing for a holistic understanding of the role of auxins in plants.
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spelling Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L.auxinPIN transporterstress responseexpression patternsoliveThe PIN-FORMED (PIN) proteins represent the most important polar auxin transporters in plants. Here, we characterized the PIN gene family in two olive genotypes, the Olea europaea subsp. europaea var. sylvestris and the var. europaea (cv. ‘Farga’). Twelve and 17 PIN genes were identified for vars. sylvestris and europaea, respectively, being distributed across 6 subfamilies. Genes encoding canonical OePINs consist of six exons, while genes encoding non-canonical OePINs are composed of five exons, with implications at protein specificities and functionality. A copia-LTR retrotransposon located in intron 4 of OePIN2b of var. europaea and the exaptation of partial sequences of that element as exons of the OePIN2b of var. sylvestris reveals such kind of event as a driving force in the olive PIN evolution. RNA-seq data showed that members from the subfamilies 1, 2, and 3 responded to abiotic and biotic stress factors. Co-expression of OePINs with genes involved in stress signaling and oxidative stress homeostasis were identified. This study highlights the importance of PIN genes on stress responses, contributing for a holistic understanding of the role of auxins in plants.MDPI2023-05-16T15:46:29Z2023-05-162022-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10174/35101http://hdl.handle.net/10174/35101https://doi.org/doi.org/10.3390/biology11071040porCardoso H, Campos C, Grzebelus D, Egas C, Peixe A. Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L. Biology (Basel). 2022;11(7):1040. Published 2022 Jul 11. doi:10.3390/biology11071040https://www.mdpi.com/2079-7737/11/7/1040ndmccampos@uevora.ptndndnd226Cardoso, HéliaCampos, CatarinaGrzebelus, DariuszEgas, ConceiçãoPeixe, Augustoinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-03T19:38:10Zoai:dspace.uevora.pt:10174/35101Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:23:30.532806Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L.
title Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L.
spellingShingle Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L.
Cardoso, Hélia
auxin
PIN transporter
stress response
expression patterns
olive
title_short Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L.
title_full Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L.
title_fullStr Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L.
title_full_unstemmed Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L.
title_sort Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L.
author Cardoso, Hélia
author_facet Cardoso, Hélia
Campos, Catarina
Grzebelus, Dariusz
Egas, Conceição
Peixe, Augusto
author_role author
author2 Campos, Catarina
Grzebelus, Dariusz
Egas, Conceição
Peixe, Augusto
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Cardoso, Hélia
Campos, Catarina
Grzebelus, Dariusz
Egas, Conceição
Peixe, Augusto
dc.subject.por.fl_str_mv auxin
PIN transporter
stress response
expression patterns
olive
topic auxin
PIN transporter
stress response
expression patterns
olive
description The PIN-FORMED (PIN) proteins represent the most important polar auxin transporters in plants. Here, we characterized the PIN gene family in two olive genotypes, the Olea europaea subsp. europaea var. sylvestris and the var. europaea (cv. ‘Farga’). Twelve and 17 PIN genes were identified for vars. sylvestris and europaea, respectively, being distributed across 6 subfamilies. Genes encoding canonical OePINs consist of six exons, while genes encoding non-canonical OePINs are composed of five exons, with implications at protein specificities and functionality. A copia-LTR retrotransposon located in intron 4 of OePIN2b of var. europaea and the exaptation of partial sequences of that element as exons of the OePIN2b of var. sylvestris reveals such kind of event as a driving force in the olive PIN evolution. RNA-seq data showed that members from the subfamilies 1, 2, and 3 responded to abiotic and biotic stress factors. Co-expression of OePINs with genes involved in stress signaling and oxidative stress homeostasis were identified. This study highlights the importance of PIN genes on stress responses, contributing for a holistic understanding of the role of auxins in plants.
publishDate 2022
dc.date.none.fl_str_mv 2022-07-01T00:00:00Z
2023-05-16T15:46:29Z
2023-05-16
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10174/35101
http://hdl.handle.net/10174/35101
https://doi.org/doi.org/10.3390/biology11071040
url http://hdl.handle.net/10174/35101
https://doi.org/doi.org/10.3390/biology11071040
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv Cardoso H, Campos C, Grzebelus D, Egas C, Peixe A. Understanding the Role of PIN Auxin Carrier Genes under Biotic and Abiotic Stresses in Olea europaea L. Biology (Basel). 2022;11(7):1040. Published 2022 Jul 11. doi:10.3390/biology11071040
https://www.mdpi.com/2079-7737/11/7/1040
nd
mccampos@uevora.pt
nd
nd
nd
226
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dc.publisher.none.fl_str_mv MDPI
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instacron:RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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