Structure-Guided Engineering of Molinate Hydrolase for the Degradation of Thiocarbamate Pesticides

Detalhes bibliográficos
Autor(a) principal: José P. Leite
Data de Publicação: 2015
Outros Autores: Márcia Duarte, Ana M. Paiva, Frederico Ferreira da Silva, Pedro M. Matias, Olga C. Nunes, Luís Gales
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/103592
Resumo: Molinate is a recalcitrant thiocarbamate used to control grass weeds in rice fields. The recently described molinate hydrolase, from Gulosibacter molinativorax ON4T, plays a key role in the only known molinate degradation pathway ending in the formation of innocuous compounds. Here we report the crystal structure of recombinant molinate hydrolase at 2.27 angstrom. The structure reveals a homotetramer with a single mononuclear metal-dependent active site per monomer. The active site architecture shows similarities with other amidohydrolases and enables us to propose a general acid-base catalysis mechanism for molinate hydrolysis. Molinate hydrolase is unable to degrade bulkier thiocarbamate pesticides such as thiobencarb which is used mostly in rice crops. Using a structural-based approach, we were able to generate a mutant (Arg187Ala) that efficiently degrades thiobencarb. The engineered enzyme is suitable for the development of a broader thiocarbamate bioremediation system.
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spelling Structure-Guided Engineering of Molinate Hydrolase for the Degradation of Thiocarbamate PesticidesMolinate is a recalcitrant thiocarbamate used to control grass weeds in rice fields. The recently described molinate hydrolase, from Gulosibacter molinativorax ON4T, plays a key role in the only known molinate degradation pathway ending in the formation of innocuous compounds. Here we report the crystal structure of recombinant molinate hydrolase at 2.27 angstrom. The structure reveals a homotetramer with a single mononuclear metal-dependent active site per monomer. The active site architecture shows similarities with other amidohydrolases and enables us to propose a general acid-base catalysis mechanism for molinate hydrolysis. Molinate hydrolase is unable to degrade bulkier thiocarbamate pesticides such as thiobencarb which is used mostly in rice crops. Using a structural-based approach, we were able to generate a mutant (Arg187Ala) that efficiently degrades thiobencarb. The engineered enzyme is suitable for the development of a broader thiocarbamate bioremediation system.20152015-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10216/103592eng1932-620310.1371/journal.pone.0123430José P. LeiteMárcia DuarteAna M. PaivaFrederico Ferreira da SilvaPedro M. MatiasOlga C. NunesLuís Galesinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T12:44:21Zoai:repositorio-aberto.up.pt:10216/103592Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:25:45.918694Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Structure-Guided Engineering of Molinate Hydrolase for the Degradation of Thiocarbamate Pesticides
title Structure-Guided Engineering of Molinate Hydrolase for the Degradation of Thiocarbamate Pesticides
spellingShingle Structure-Guided Engineering of Molinate Hydrolase for the Degradation of Thiocarbamate Pesticides
José P. Leite
title_short Structure-Guided Engineering of Molinate Hydrolase for the Degradation of Thiocarbamate Pesticides
title_full Structure-Guided Engineering of Molinate Hydrolase for the Degradation of Thiocarbamate Pesticides
title_fullStr Structure-Guided Engineering of Molinate Hydrolase for the Degradation of Thiocarbamate Pesticides
title_full_unstemmed Structure-Guided Engineering of Molinate Hydrolase for the Degradation of Thiocarbamate Pesticides
title_sort Structure-Guided Engineering of Molinate Hydrolase for the Degradation of Thiocarbamate Pesticides
author José P. Leite
author_facet José P. Leite
Márcia Duarte
Ana M. Paiva
Frederico Ferreira da Silva
Pedro M. Matias
Olga C. Nunes
Luís Gales
author_role author
author2 Márcia Duarte
Ana M. Paiva
Frederico Ferreira da Silva
Pedro M. Matias
Olga C. Nunes
Luís Gales
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv José P. Leite
Márcia Duarte
Ana M. Paiva
Frederico Ferreira da Silva
Pedro M. Matias
Olga C. Nunes
Luís Gales
description Molinate is a recalcitrant thiocarbamate used to control grass weeds in rice fields. The recently described molinate hydrolase, from Gulosibacter molinativorax ON4T, plays a key role in the only known molinate degradation pathway ending in the formation of innocuous compounds. Here we report the crystal structure of recombinant molinate hydrolase at 2.27 angstrom. The structure reveals a homotetramer with a single mononuclear metal-dependent active site per monomer. The active site architecture shows similarities with other amidohydrolases and enables us to propose a general acid-base catalysis mechanism for molinate hydrolysis. Molinate hydrolase is unable to degrade bulkier thiocarbamate pesticides such as thiobencarb which is used mostly in rice crops. Using a structural-based approach, we were able to generate a mutant (Arg187Ala) that efficiently degrades thiobencarb. The engineered enzyme is suitable for the development of a broader thiocarbamate bioremediation system.
publishDate 2015
dc.date.none.fl_str_mv 2015
2015-01-01T00:00:00Z
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url https://hdl.handle.net/10216/103592
dc.language.iso.fl_str_mv eng
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dc.relation.none.fl_str_mv 1932-6203
10.1371/journal.pone.0123430
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