A gold nanoparticle based colorimetric test allied to Salmonella LAMP amplification: toward the revolution of Food Quality Control

Detalhes bibliográficos
Autor(a) principal: Oliveira, Cindy Duarte de
Data de Publicação: 2016
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10362/86714
Resumo: Microorganisms are the primary cause of food spoilage and foodborne illness. Every year Salmonella causes 1.3 billion cases of disease worldwide, representing a considerable burden in both developing and developed countries. Despite of great advances in technologies in the last decade, current Salmonella detection methods are not fast and reliable enough. In order to address these issues a test based in the colorimetric properties of gold nanoparticles was combined with LAMP technique for the detection of Salmonella. Gold nanoparticles were synthesized and functionalised with thiol-modified DNA oligonucleotides (Gold nanoprobes) able to recognize the target sequence - ttrRSBCA locus from Salmonella. It was amplified by LAMP technique, which was optimized in this study. Four batches of gold nanoprobe were synthesized from two different batches of gold nanoparticles and under different pH. The arising gold nanoprobes showed some differences between them, namely in their stability and their detection capacity. These differences were investigated and it was verified that their cause was related to the conditions of functionalisation, namely ultrasound, ionic strength and nanoparticles size. The last was confirmed with TEM. Au-nanoprobes were then used in a colorimetric method for DNA detection based on a non-cross-linking approach - upon increasing ionic strength, Au-nanoprobes aggregate and the solution changes colour from the original red to blue, due to the red-shift of the typical Surface Plasmon Resonance (SPR) band of gold nanoparticles; the presence of a complementary target to the probe sequence, prevents aggregation of the Au-nanoprobes and the solution remains red. Gold nanoprobes detection capacity was tested with LAMP and PCR products and it was verified that a better discrimination is achieved with PCR products. The system developed here presents some advantages but still needs optimisation for further application in pathogen detection in food.
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spelling A gold nanoparticle based colorimetric test allied to Salmonella LAMP amplification: toward the revolution of Food Quality ControlLoop-mediated isothermal amplification (LAMP)gold nanoparticlesSPRSalmonellaDomínio/Área Científica::Engenharia e Tecnologia::Engenharia QuímicaMicroorganisms are the primary cause of food spoilage and foodborne illness. Every year Salmonella causes 1.3 billion cases of disease worldwide, representing a considerable burden in both developing and developed countries. Despite of great advances in technologies in the last decade, current Salmonella detection methods are not fast and reliable enough. In order to address these issues a test based in the colorimetric properties of gold nanoparticles was combined with LAMP technique for the detection of Salmonella. Gold nanoparticles were synthesized and functionalised with thiol-modified DNA oligonucleotides (Gold nanoprobes) able to recognize the target sequence - ttrRSBCA locus from Salmonella. It was amplified by LAMP technique, which was optimized in this study. Four batches of gold nanoprobe were synthesized from two different batches of gold nanoparticles and under different pH. The arising gold nanoprobes showed some differences between them, namely in their stability and their detection capacity. These differences were investigated and it was verified that their cause was related to the conditions of functionalisation, namely ultrasound, ionic strength and nanoparticles size. The last was confirmed with TEM. Au-nanoprobes were then used in a colorimetric method for DNA detection based on a non-cross-linking approach - upon increasing ionic strength, Au-nanoprobes aggregate and the solution changes colour from the original red to blue, due to the red-shift of the typical Surface Plasmon Resonance (SPR) band of gold nanoparticles; the presence of a complementary target to the probe sequence, prevents aggregation of the Au-nanoprobes and the solution remains red. Gold nanoprobes detection capacity was tested with LAMP and PCR products and it was verified that a better discrimination is achieved with PCR products. The system developed here presents some advantages but still needs optimisation for further application in pathogen detection in food.Baptista, PedroRUNOliveira, Cindy Duarte de2019-11-08T10:54:46Z2016-11-2520162016-11-25T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10362/86714enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:38:51Zoai:run.unl.pt:10362/86714Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:36:42.631591Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A gold nanoparticle based colorimetric test allied to Salmonella LAMP amplification: toward the revolution of Food Quality Control
title A gold nanoparticle based colorimetric test allied to Salmonella LAMP amplification: toward the revolution of Food Quality Control
spellingShingle A gold nanoparticle based colorimetric test allied to Salmonella LAMP amplification: toward the revolution of Food Quality Control
Oliveira, Cindy Duarte de
Loop-mediated isothermal amplification (LAMP)
gold nanoparticles
SPR
Salmonella
Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química
title_short A gold nanoparticle based colorimetric test allied to Salmonella LAMP amplification: toward the revolution of Food Quality Control
title_full A gold nanoparticle based colorimetric test allied to Salmonella LAMP amplification: toward the revolution of Food Quality Control
title_fullStr A gold nanoparticle based colorimetric test allied to Salmonella LAMP amplification: toward the revolution of Food Quality Control
title_full_unstemmed A gold nanoparticle based colorimetric test allied to Salmonella LAMP amplification: toward the revolution of Food Quality Control
title_sort A gold nanoparticle based colorimetric test allied to Salmonella LAMP amplification: toward the revolution of Food Quality Control
author Oliveira, Cindy Duarte de
author_facet Oliveira, Cindy Duarte de
author_role author
dc.contributor.none.fl_str_mv Baptista, Pedro
RUN
dc.contributor.author.fl_str_mv Oliveira, Cindy Duarte de
dc.subject.por.fl_str_mv Loop-mediated isothermal amplification (LAMP)
gold nanoparticles
SPR
Salmonella
Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química
topic Loop-mediated isothermal amplification (LAMP)
gold nanoparticles
SPR
Salmonella
Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química
description Microorganisms are the primary cause of food spoilage and foodborne illness. Every year Salmonella causes 1.3 billion cases of disease worldwide, representing a considerable burden in both developing and developed countries. Despite of great advances in technologies in the last decade, current Salmonella detection methods are not fast and reliable enough. In order to address these issues a test based in the colorimetric properties of gold nanoparticles was combined with LAMP technique for the detection of Salmonella. Gold nanoparticles were synthesized and functionalised with thiol-modified DNA oligonucleotides (Gold nanoprobes) able to recognize the target sequence - ttrRSBCA locus from Salmonella. It was amplified by LAMP technique, which was optimized in this study. Four batches of gold nanoprobe were synthesized from two different batches of gold nanoparticles and under different pH. The arising gold nanoprobes showed some differences between them, namely in their stability and their detection capacity. These differences were investigated and it was verified that their cause was related to the conditions of functionalisation, namely ultrasound, ionic strength and nanoparticles size. The last was confirmed with TEM. Au-nanoprobes were then used in a colorimetric method for DNA detection based on a non-cross-linking approach - upon increasing ionic strength, Au-nanoprobes aggregate and the solution changes colour from the original red to blue, due to the red-shift of the typical Surface Plasmon Resonance (SPR) band of gold nanoparticles; the presence of a complementary target to the probe sequence, prevents aggregation of the Au-nanoprobes and the solution remains red. Gold nanoprobes detection capacity was tested with LAMP and PCR products and it was verified that a better discrimination is achieved with PCR products. The system developed here presents some advantages but still needs optimisation for further application in pathogen detection in food.
publishDate 2016
dc.date.none.fl_str_mv 2016-11-25
2016
2016-11-25T00:00:00Z
2019-11-08T10:54:46Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10362/86714
url http://hdl.handle.net/10362/86714
dc.language.iso.fl_str_mv eng
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dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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