First insights on the bacterial fingerprints of live seahorse skin mucus and its relevance for traceability

Detalhes bibliográficos
Autor(a) principal: Cohen, Felipe P.A.
Data de Publicação: 2018
Outros Autores: Pimentel, Tânia, Valenti, Wagner C., Calado, Ricardo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/37209
Resumo: Developing a technique to trace the geographic origin of live seahorses is paramount to increase trade regulation and foster conservation. The present study evaluated for the first time the suitability of using bacterial fingerprints present in live seahorse skin mucus to trace their origin. Bacterial 16S rDNA fragments were retrieved from seahorse mucus in a non-invasive and non-destructive way, with their profile (fingerprint) being determined using denaturing gradient gel electrophoresis (DGGE). Bacterial fingerprints were compared among seahorses: (1) originating from different geographic origins sampled at the same period; (2) originating from the same location but sampled one month apart; and (3) originating from specimens in the wild and after being stocked in captivity for 40 and 80 days. Similarities in bacterial fingerprints were determined using hierarchical cluster analysis. Results showed that geographic location affected the bacterial fingerprints of wild seahorses and that specimens sampled in the same location displayed a higher level of similarity. This finding supports that this methodological approach holds the potential to reveal local signatures and trace the origin of live seahorses. Bacterial communities from wild seahorses varied over short-time periods, with this natural variability being a potential constraint that may limit the comparison of specimens collected over long periods. Bacterial fingerprints displayed by wild specimens significantly shifted after 40 days in captivity, with a higher level of similarity being recorded for seahorses after 40 or 80 days in captivity, than when compared with those displayed in the wild. This stabilization of the bacterial community under captive conditions shows the potential that bacterial fingerprints may hold for aquaculture, as these can be used as unique signature to trace seahorses to their production facility.
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spelling First insights on the bacterial fingerprints of live seahorse skin mucus and its relevance for traceabilityHippocampusMarine ornamentalsMicrobiological barcodesBacterial communitiesDeveloping a technique to trace the geographic origin of live seahorses is paramount to increase trade regulation and foster conservation. The present study evaluated for the first time the suitability of using bacterial fingerprints present in live seahorse skin mucus to trace their origin. Bacterial 16S rDNA fragments were retrieved from seahorse mucus in a non-invasive and non-destructive way, with their profile (fingerprint) being determined using denaturing gradient gel electrophoresis (DGGE). Bacterial fingerprints were compared among seahorses: (1) originating from different geographic origins sampled at the same period; (2) originating from the same location but sampled one month apart; and (3) originating from specimens in the wild and after being stocked in captivity for 40 and 80 days. Similarities in bacterial fingerprints were determined using hierarchical cluster analysis. Results showed that geographic location affected the bacterial fingerprints of wild seahorses and that specimens sampled in the same location displayed a higher level of similarity. This finding supports that this methodological approach holds the potential to reveal local signatures and trace the origin of live seahorses. Bacterial communities from wild seahorses varied over short-time periods, with this natural variability being a potential constraint that may limit the comparison of specimens collected over long periods. Bacterial fingerprints displayed by wild specimens significantly shifted after 40 days in captivity, with a higher level of similarity being recorded for seahorses after 40 or 80 days in captivity, than when compared with those displayed in the wild. This stabilization of the bacterial community under captive conditions shows the potential that bacterial fingerprints may hold for aquaculture, as these can be used as unique signature to trace seahorses to their production facility.Elsevier2023-04-20T09:35:01Z2018-07-01T00:00:00Z2018-07-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/37209eng0044-848610.1016/j.aquaculture.2018.04.020Cohen, Felipe P.A.Pimentel, TâniaValenti, Wagner C.Calado, Ricardoinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T12:11:46Zoai:ria.ua.pt:10773/37209Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:07:50.218919Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv First insights on the bacterial fingerprints of live seahorse skin mucus and its relevance for traceability
title First insights on the bacterial fingerprints of live seahorse skin mucus and its relevance for traceability
spellingShingle First insights on the bacterial fingerprints of live seahorse skin mucus and its relevance for traceability
Cohen, Felipe P.A.
Hippocampus
Marine ornamentals
Microbiological barcodes
Bacterial communities
title_short First insights on the bacterial fingerprints of live seahorse skin mucus and its relevance for traceability
title_full First insights on the bacterial fingerprints of live seahorse skin mucus and its relevance for traceability
title_fullStr First insights on the bacterial fingerprints of live seahorse skin mucus and its relevance for traceability
title_full_unstemmed First insights on the bacterial fingerprints of live seahorse skin mucus and its relevance for traceability
title_sort First insights on the bacterial fingerprints of live seahorse skin mucus and its relevance for traceability
author Cohen, Felipe P.A.
author_facet Cohen, Felipe P.A.
Pimentel, Tânia
Valenti, Wagner C.
Calado, Ricardo
author_role author
author2 Pimentel, Tânia
Valenti, Wagner C.
Calado, Ricardo
author2_role author
author
author
dc.contributor.author.fl_str_mv Cohen, Felipe P.A.
Pimentel, Tânia
Valenti, Wagner C.
Calado, Ricardo
dc.subject.por.fl_str_mv Hippocampus
Marine ornamentals
Microbiological barcodes
Bacterial communities
topic Hippocampus
Marine ornamentals
Microbiological barcodes
Bacterial communities
description Developing a technique to trace the geographic origin of live seahorses is paramount to increase trade regulation and foster conservation. The present study evaluated for the first time the suitability of using bacterial fingerprints present in live seahorse skin mucus to trace their origin. Bacterial 16S rDNA fragments were retrieved from seahorse mucus in a non-invasive and non-destructive way, with their profile (fingerprint) being determined using denaturing gradient gel electrophoresis (DGGE). Bacterial fingerprints were compared among seahorses: (1) originating from different geographic origins sampled at the same period; (2) originating from the same location but sampled one month apart; and (3) originating from specimens in the wild and after being stocked in captivity for 40 and 80 days. Similarities in bacterial fingerprints were determined using hierarchical cluster analysis. Results showed that geographic location affected the bacterial fingerprints of wild seahorses and that specimens sampled in the same location displayed a higher level of similarity. This finding supports that this methodological approach holds the potential to reveal local signatures and trace the origin of live seahorses. Bacterial communities from wild seahorses varied over short-time periods, with this natural variability being a potential constraint that may limit the comparison of specimens collected over long periods. Bacterial fingerprints displayed by wild specimens significantly shifted after 40 days in captivity, with a higher level of similarity being recorded for seahorses after 40 or 80 days in captivity, than when compared with those displayed in the wild. This stabilization of the bacterial community under captive conditions shows the potential that bacterial fingerprints may hold for aquaculture, as these can be used as unique signature to trace seahorses to their production facility.
publishDate 2018
dc.date.none.fl_str_mv 2018-07-01T00:00:00Z
2018-07-01
2023-04-20T09:35:01Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10773/37209
url http://hdl.handle.net/10773/37209
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0044-8486
10.1016/j.aquaculture.2018.04.020
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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