Second-generation environmental sequencing unmasks marine metazoan biodiversity

Detalhes bibliográficos
Autor(a) principal: Fonseca, V. G.
Data de Publicação: 2010
Outros Autores: Carvalho, Gary, Sung, W., Johnson, Harriet F., Power, Deborah, Neill, Simon P., Packer, Margaret, Blaxter, M. L., Lambshead, P. J. D., Thomas, W. K., Creer, S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/5488
Resumo: Biodiversity is of crucial importance for ecosystem functioning, sustainability and resilience, but the magnitude and organization of marine diversity at a range of spatial and taxonomic scales are undefined. In this paper, we use second-generation sequencing to unmask putatively diverse marine metazoan biodiversity in a Scottish temperate benthic ecosystem. We show that remarkable differences in diversity occurred at microgeographical scales and refute currently accepted ecological and taxonomic paradigms of meiofaunal identity, rank abundance and concomitant understanding of trophic dynamics. Richness estimates from the current benchmarked Operational Clustering of Taxonomic Units from Parallel UltraSequencing analyses are broadly aligned with those derived from morphological assessments. However, the slope of taxon rarefaction curves for many phyla remains incomplete, suggesting that the true alpha diversity is likely to exceed current perceptions. The approaches provide a rapid, objective and cost-effective taxonomic framework for exploring links between ecosystem structure and function of all hitherto intractable, but ecologically important, communities.
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spelling Second-generation environmental sequencing unmasks marine metazoan biodiversityBiodiversity is of crucial importance for ecosystem functioning, sustainability and resilience, but the magnitude and organization of marine diversity at a range of spatial and taxonomic scales are undefined. In this paper, we use second-generation sequencing to unmask putatively diverse marine metazoan biodiversity in a Scottish temperate benthic ecosystem. We show that remarkable differences in diversity occurred at microgeographical scales and refute currently accepted ecological and taxonomic paradigms of meiofaunal identity, rank abundance and concomitant understanding of trophic dynamics. Richness estimates from the current benchmarked Operational Clustering of Taxonomic Units from Parallel UltraSequencing analyses are broadly aligned with those derived from morphological assessments. However, the slope of taxon rarefaction curves for many phyla remains incomplete, suggesting that the true alpha diversity is likely to exceed current perceptions. The approaches provide a rapid, objective and cost-effective taxonomic framework for exploring links between ecosystem structure and function of all hitherto intractable, but ecologically important, communities.Nature Publishing GroupSapientiaFonseca, V. G.Carvalho, GarySung, W.Johnson, Harriet F.Power, DeborahNeill, Simon P.Packer, MargaretBlaxter, M. L.Lambshead, P. J. D.Thomas, W. K.Creer, S.2014-10-24T13:15:35Z20102010-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/5488engVera G. Fonse, Gary R. Carvalho, Way Sung, Harriet F. Johnson, Deborah M. Power, Simon P. Neill, Margaret Packer, Mark L. Blaxter, P. John D. Lambshead, W. Kelley Thomas & Simon Creer, "Second-generation environmental sequencing unmasks marine metazoan biodiversity" in Nature Communications 1, Article number: 982041-1723AUT: DPO00386http://dx.doi.org/10.1038/ncomms1095info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:16:42Zoai:sapientia.ualg.pt:10400.1/5488Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:58:30.927097Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Second-generation environmental sequencing unmasks marine metazoan biodiversity
title Second-generation environmental sequencing unmasks marine metazoan biodiversity
spellingShingle Second-generation environmental sequencing unmasks marine metazoan biodiversity
Fonseca, V. G.
title_short Second-generation environmental sequencing unmasks marine metazoan biodiversity
title_full Second-generation environmental sequencing unmasks marine metazoan biodiversity
title_fullStr Second-generation environmental sequencing unmasks marine metazoan biodiversity
title_full_unstemmed Second-generation environmental sequencing unmasks marine metazoan biodiversity
title_sort Second-generation environmental sequencing unmasks marine metazoan biodiversity
author Fonseca, V. G.
author_facet Fonseca, V. G.
Carvalho, Gary
Sung, W.
Johnson, Harriet F.
Power, Deborah
Neill, Simon P.
Packer, Margaret
Blaxter, M. L.
Lambshead, P. J. D.
Thomas, W. K.
Creer, S.
author_role author
author2 Carvalho, Gary
Sung, W.
Johnson, Harriet F.
Power, Deborah
Neill, Simon P.
Packer, Margaret
Blaxter, M. L.
Lambshead, P. J. D.
Thomas, W. K.
Creer, S.
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Fonseca, V. G.
Carvalho, Gary
Sung, W.
Johnson, Harriet F.
Power, Deborah
Neill, Simon P.
Packer, Margaret
Blaxter, M. L.
Lambshead, P. J. D.
Thomas, W. K.
Creer, S.
description Biodiversity is of crucial importance for ecosystem functioning, sustainability and resilience, but the magnitude and organization of marine diversity at a range of spatial and taxonomic scales are undefined. In this paper, we use second-generation sequencing to unmask putatively diverse marine metazoan biodiversity in a Scottish temperate benthic ecosystem. We show that remarkable differences in diversity occurred at microgeographical scales and refute currently accepted ecological and taxonomic paradigms of meiofaunal identity, rank abundance and concomitant understanding of trophic dynamics. Richness estimates from the current benchmarked Operational Clustering of Taxonomic Units from Parallel UltraSequencing analyses are broadly aligned with those derived from morphological assessments. However, the slope of taxon rarefaction curves for many phyla remains incomplete, suggesting that the true alpha diversity is likely to exceed current perceptions. The approaches provide a rapid, objective and cost-effective taxonomic framework for exploring links between ecosystem structure and function of all hitherto intractable, but ecologically important, communities.
publishDate 2010
dc.date.none.fl_str_mv 2010
2010-01-01T00:00:00Z
2014-10-24T13:15:35Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/5488
url http://hdl.handle.net/10400.1/5488
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Vera G. Fonse, Gary R. Carvalho, Way Sung, Harriet F. Johnson, Deborah M. Power, Simon P. Neill, Margaret Packer, Mark L. Blaxter, P. John D. Lambshead, W. Kelley Thomas & Simon Creer, "Second-generation environmental sequencing unmasks marine metazoan biodiversity" in Nature Communications 1, Article number: 98
2041-1723
AUT: DPO00386
http://dx.doi.org/10.1038/ncomms1095
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publisher.none.fl_str_mv Nature Publishing Group
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