The triple amino acid substitution TAP-IVS in the EPSPS gene confers high glyphosate resistance to the superweed amaranthus hybridus

Detalhes bibliográficos
Autor(a) principal: García, Maria
Data de Publicação: 2019
Outros Autores: Palma-Bautista, Candelario, Rojano-Delgado, Antonia, Bracamonte, Enzo, Portugal, João, Alcántara-de la Cruz, Ricardo, De Prado, Rafael
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/20.500.12207/5436
Resumo: The introduction of glyphosate-resistant (GR) crops revolutionized weed management; however, the improper use of this technology has selected for a wide range of weeds resistant to glyphosate, referred to as superweeds. We characterized the high glyphosate resistance level of an Amaranthus hybridus population (GRH)—a superweed collected in a GR-soybean field from Cordoba, Argentina—as well as the resistance mechanisms that govern it in comparison to a susceptible population (GSH). The GRH population was 100.6 times more resistant than the GSH population. Reduced absorption and metabolism of glyphosate, as well as gene duplication of 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) or its overexpression did not contribute to this resistance. However, GSH plants translocated at least 10% more 14C-glyphosate to the rest of the plant and roots than GRH plants at 9 h after treatment. In addition, a novel triple amino acid substitution from TAP (wild type, GSH) to IVS (triple mutant, GRH) was identified in the EPSPS gene of the GRH. The nucleotide substitutions consisted of ATA102, GTC103 and TCA106 instead of ACA102, GCG103, and CCA106, respectively. The hydrogen bond distances between Gly-101 and Arg-105 positions increased from 2.89 Å (wild type) to 2.93 Å (triple-mutant) according to the EPSPS structural modeling. These results support that the high level of glyphosate resistance of the GRH A. hybridus population was mainly governed by the triple mutation TAP-IVS found of the EPSPS target site, but the impaired translocation of herbicide also contributed in this resistance.
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spelling The triple amino acid substitution TAP-IVS in the EPSPS gene confers high glyphosate resistance to the superweed amaranthus hybridus5-enolpyruvylshikimate-3-phosphate synthaseTarget site resistanceSmooth pigweedNon target siteGlyphosate-resistant cropsEPSPS gene mutationEPSPS gene mutationThe introduction of glyphosate-resistant (GR) crops revolutionized weed management; however, the improper use of this technology has selected for a wide range of weeds resistant to glyphosate, referred to as superweeds. We characterized the high glyphosate resistance level of an Amaranthus hybridus population (GRH)—a superweed collected in a GR-soybean field from Cordoba, Argentina—as well as the resistance mechanisms that govern it in comparison to a susceptible population (GSH). The GRH population was 100.6 times more resistant than the GSH population. Reduced absorption and metabolism of glyphosate, as well as gene duplication of 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) or its overexpression did not contribute to this resistance. However, GSH plants translocated at least 10% more 14C-glyphosate to the rest of the plant and roots than GRH plants at 9 h after treatment. In addition, a novel triple amino acid substitution from TAP (wild type, GSH) to IVS (triple mutant, GRH) was identified in the EPSPS gene of the GRH. The nucleotide substitutions consisted of ATA102, GTC103 and TCA106 instead of ACA102, GCG103, and CCA106, respectively. The hydrogen bond distances between Gly-101 and Arg-105 positions increased from 2.89 Å (wild type) to 2.93 Å (triple-mutant) according to the EPSPS structural modeling. These results support that the high level of glyphosate resistance of the GRH A. hybridus population was mainly governed by the triple mutation TAP-IVS found of the EPSPS target site, but the impaired translocation of herbicide also contributed in this resistance.MDPI2022-05-09T10:23:46Z2019-05-01T00:00:00Z2019-05-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/20.500.12207/5436eng1661-65961422-0067https://doi.org/10.3390/ijms20102396García, MariaPalma-Bautista, CandelarioRojano-Delgado, AntoniaBracamonte, EnzoPortugal, JoãoAlcántara-de la Cruz, RicardoDe Prado, Rafaelinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-06-23T07:47:47Zoai:repositorio.ipbeja.pt:20.500.12207/5436Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T14:59:39.062758Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv The triple amino acid substitution TAP-IVS in the EPSPS gene confers high glyphosate resistance to the superweed amaranthus hybridus
title The triple amino acid substitution TAP-IVS in the EPSPS gene confers high glyphosate resistance to the superweed amaranthus hybridus
spellingShingle The triple amino acid substitution TAP-IVS in the EPSPS gene confers high glyphosate resistance to the superweed amaranthus hybridus
García, Maria
5-enolpyruvylshikimate-3-phosphate synthase
Target site resistance
Smooth pigweed
Non target site
Glyphosate-resistant crops
EPSPS gene mutation
EPSPS gene mutation
title_short The triple amino acid substitution TAP-IVS in the EPSPS gene confers high glyphosate resistance to the superweed amaranthus hybridus
title_full The triple amino acid substitution TAP-IVS in the EPSPS gene confers high glyphosate resistance to the superweed amaranthus hybridus
title_fullStr The triple amino acid substitution TAP-IVS in the EPSPS gene confers high glyphosate resistance to the superweed amaranthus hybridus
title_full_unstemmed The triple amino acid substitution TAP-IVS in the EPSPS gene confers high glyphosate resistance to the superweed amaranthus hybridus
title_sort The triple amino acid substitution TAP-IVS in the EPSPS gene confers high glyphosate resistance to the superweed amaranthus hybridus
author García, Maria
author_facet García, Maria
Palma-Bautista, Candelario
Rojano-Delgado, Antonia
Bracamonte, Enzo
Portugal, João
Alcántara-de la Cruz, Ricardo
De Prado, Rafael
author_role author
author2 Palma-Bautista, Candelario
Rojano-Delgado, Antonia
Bracamonte, Enzo
Portugal, João
Alcántara-de la Cruz, Ricardo
De Prado, Rafael
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv García, Maria
Palma-Bautista, Candelario
Rojano-Delgado, Antonia
Bracamonte, Enzo
Portugal, João
Alcántara-de la Cruz, Ricardo
De Prado, Rafael
dc.subject.por.fl_str_mv 5-enolpyruvylshikimate-3-phosphate synthase
Target site resistance
Smooth pigweed
Non target site
Glyphosate-resistant crops
EPSPS gene mutation
EPSPS gene mutation
topic 5-enolpyruvylshikimate-3-phosphate synthase
Target site resistance
Smooth pigweed
Non target site
Glyphosate-resistant crops
EPSPS gene mutation
EPSPS gene mutation
description The introduction of glyphosate-resistant (GR) crops revolutionized weed management; however, the improper use of this technology has selected for a wide range of weeds resistant to glyphosate, referred to as superweeds. We characterized the high glyphosate resistance level of an Amaranthus hybridus population (GRH)—a superweed collected in a GR-soybean field from Cordoba, Argentina—as well as the resistance mechanisms that govern it in comparison to a susceptible population (GSH). The GRH population was 100.6 times more resistant than the GSH population. Reduced absorption and metabolism of glyphosate, as well as gene duplication of 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) or its overexpression did not contribute to this resistance. However, GSH plants translocated at least 10% more 14C-glyphosate to the rest of the plant and roots than GRH plants at 9 h after treatment. In addition, a novel triple amino acid substitution from TAP (wild type, GSH) to IVS (triple mutant, GRH) was identified in the EPSPS gene of the GRH. The nucleotide substitutions consisted of ATA102, GTC103 and TCA106 instead of ACA102, GCG103, and CCA106, respectively. The hydrogen bond distances between Gly-101 and Arg-105 positions increased from 2.89 Å (wild type) to 2.93 Å (triple-mutant) according to the EPSPS structural modeling. These results support that the high level of glyphosate resistance of the GRH A. hybridus population was mainly governed by the triple mutation TAP-IVS found of the EPSPS target site, but the impaired translocation of herbicide also contributed in this resistance.
publishDate 2019
dc.date.none.fl_str_mv 2019-05-01T00:00:00Z
2019-05-01T00:00:00Z
2022-05-09T10:23:46Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/20.500.12207/5436
url http://hdl.handle.net/20.500.12207/5436
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1661-6596
1422-0067
https://doi.org/10.3390/ijms20102396
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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