Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.1/12473 |
Resumo: | Mosses are a highly diverse lineage of land plants, whose diversification, spanning at least 400 million years, remains phylogenetically ambiguous due to the lack of fossils, massive early extinctions, late radiations, limited morphological variation, and conflicting signal among previously used markers. Here, we present phylogenetic reconstructions based on complete organellar exomes and a comparable set of nuclear genes for this major lineage of land plants. Our analysis of 142 species representing 29 of the 30 moss orders reveals that relative average rates of non-synonymous substitutions in nuclear versus plastid genes are much higher in mosses than in seed plants, consistent with the emerging concept of evolutionary dynamism in mosses. Our results highlight the evolutionary significance of taxa with reduced morphologies, shed light on the relative tempo and mechanisms underlying major cladogenic events, and suggest hypotheses for the relationships and delineation of moss orders. |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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7160 |
spelling |
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomesMosses are a highly diverse lineage of land plants, whose diversification, spanning at least 400 million years, remains phylogenetically ambiguous due to the lack of fossils, massive early extinctions, late radiations, limited morphological variation, and conflicting signal among previously used markers. Here, we present phylogenetic reconstructions based on complete organellar exomes and a comparable set of nuclear genes for this major lineage of land plants. Our analysis of 142 species representing 29 of the 30 moss orders reveals that relative average rates of non-synonymous substitutions in nuclear versus plastid genes are much higher in mosses than in seed plants, consistent with the emerging concept of evolutionary dynamism in mosses. Our results highlight the evolutionary significance of taxa with reduced morphologies, shed light on the relative tempo and mechanisms underlying major cladogenic events, and suggest hypotheses for the relationships and delineation of moss orders.Nature Publishing GroupSapientiaLiu, YangJohnson, Matthew G.Cox, CymonMedina, RafaelDevos, NicolasVanderpoorten, AlainHedenäs, LarsBell, Neil E.Shevock, James R.Aguero, BlankaQuandt, DietmarWickett, Norman J.Shaw, A. JonathanGoffinet, B.2019-04-15T09:12:22Z20192019-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/12473eng2041-172310.1038/s41467-019-09454-winfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-11-29T10:46:02Zoai:sapientia.ualg.pt:10400.1/12473Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-11-29T10:46:02Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes |
title |
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes |
spellingShingle |
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes Liu, Yang |
title_short |
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes |
title_full |
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes |
title_fullStr |
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes |
title_full_unstemmed |
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes |
title_sort |
Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes |
author |
Liu, Yang |
author_facet |
Liu, Yang Johnson, Matthew G. Cox, Cymon Medina, Rafael Devos, Nicolas Vanderpoorten, Alain Hedenäs, Lars Bell, Neil E. Shevock, James R. Aguero, Blanka Quandt, Dietmar Wickett, Norman J. Shaw, A. Jonathan Goffinet, B. |
author_role |
author |
author2 |
Johnson, Matthew G. Cox, Cymon Medina, Rafael Devos, Nicolas Vanderpoorten, Alain Hedenäs, Lars Bell, Neil E. Shevock, James R. Aguero, Blanka Quandt, Dietmar Wickett, Norman J. Shaw, A. Jonathan Goffinet, B. |
author2_role |
author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Sapientia |
dc.contributor.author.fl_str_mv |
Liu, Yang Johnson, Matthew G. Cox, Cymon Medina, Rafael Devos, Nicolas Vanderpoorten, Alain Hedenäs, Lars Bell, Neil E. Shevock, James R. Aguero, Blanka Quandt, Dietmar Wickett, Norman J. Shaw, A. Jonathan Goffinet, B. |
description |
Mosses are a highly diverse lineage of land plants, whose diversification, spanning at least 400 million years, remains phylogenetically ambiguous due to the lack of fossils, massive early extinctions, late radiations, limited morphological variation, and conflicting signal among previously used markers. Here, we present phylogenetic reconstructions based on complete organellar exomes and a comparable set of nuclear genes for this major lineage of land plants. Our analysis of 142 species representing 29 of the 30 moss orders reveals that relative average rates of non-synonymous substitutions in nuclear versus plastid genes are much higher in mosses than in seed plants, consistent with the emerging concept of evolutionary dynamism in mosses. Our results highlight the evolutionary significance of taxa with reduced morphologies, shed light on the relative tempo and mechanisms underlying major cladogenic events, and suggest hypotheses for the relationships and delineation of moss orders. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-04-15T09:12:22Z 2019 2019-01-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.1/12473 |
url |
http://hdl.handle.net/10400.1/12473 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
2041-1723 10.1038/s41467-019-09454-w |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Nature Publishing Group |
publisher.none.fl_str_mv |
Nature Publishing Group |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
mluisa.alvim@gmail.com |
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1817549810150932480 |