Programmable graphene-based microfluidic sensor for DNA detection

Detalhes bibliográficos
Autor(a) principal: Purwidyantri, Agnes
Data de Publicação: 2022
Outros Autores: Ipatov, Andrey, Domingues, Telma, Borme, Jérôme, Martins, Marco, Alpuim, P., Prado, Marta
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/1822/81262
Resumo: This study presents the development of a lab-on-a-chip (LoC) by integrating a graphene field-effect transistor (FET) chip with a programmable microfluidic device for DNA detection. The real-time biochemical events on the graphene FET chip were monitored through Dirac voltage shift data from the portable graphene curve reader with changes dependent on the fluidic flow into the sensing interface by a fully automated programmable microfluidic system. High sensitivity with high reliability can be obtained with a nine-graphene sensor layout on a single chip. The portable graphene curve reader also provides a tunable electrical parameter setup and straightforward data acquisition. Fluidic control was performed through a multi-position valve, allowing sequential commands for liquid injection into the polydimethylsiloxane (PDMS) flow cell mounted on the sensing chip. The flow cell design with impinging jet geometry and the microfluidic system packaging offer high precision and portability as a less laborious and low-cost sensing setup. The merged system allows for various functionalities, including probe DNA (pDNA) immobilization, a blocking step, and DNA hybridization with stable signal output autonomously, even in a long-run experimental setup. As a DNA sensor, the proposed prototype has demonstrated a high sensitivity of ~44 mV/decade of target DNA concentration, with an outstanding limit of detection (LoD) of ~0.642 aM, making it one of the most sensitive sensors reported up to date. The programmable device has demonstrated essential versatilities for biomolecular detection in a fully portable and automated platform.
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spelling Programmable graphene-based microfluidic sensor for DNA detectionLab-on-a-chip (LoC)Graphene field-effect transistor (FET)Programmable microfluidicDNA sensorEngenharia e Tecnologia::NanotecnologiaScience & TechnologyThis study presents the development of a lab-on-a-chip (LoC) by integrating a graphene field-effect transistor (FET) chip with a programmable microfluidic device for DNA detection. The real-time biochemical events on the graphene FET chip were monitored through Dirac voltage shift data from the portable graphene curve reader with changes dependent on the fluidic flow into the sensing interface by a fully automated programmable microfluidic system. High sensitivity with high reliability can be obtained with a nine-graphene sensor layout on a single chip. The portable graphene curve reader also provides a tunable electrical parameter setup and straightforward data acquisition. Fluidic control was performed through a multi-position valve, allowing sequential commands for liquid injection into the polydimethylsiloxane (PDMS) flow cell mounted on the sensing chip. The flow cell design with impinging jet geometry and the microfluidic system packaging offer high precision and portability as a less laborious and low-cost sensing setup. The merged system allows for various functionalities, including probe DNA (pDNA) immobilization, a blocking step, and DNA hybridization with stable signal output autonomously, even in a long-run experimental setup. As a DNA sensor, the proposed prototype has demonstrated a high sensitivity of ~44 mV/decade of target DNA concentration, with an outstanding limit of detection (LoD) of ~0.642 aM, making it one of the most sensitive sensors reported up to date. The programmable device has demonstrated essential versatilities for biomolecular detection in a fully portable and automated platform.This research is supported by PORTGRAPHE-Control of Port and Douro Wines authenticity using graphene DNA sensors project co-funded by Fundação para a Ciência e a Tecnologia (FCT) Portugal (PTDC/BIA-MOL/31069/2017) and the ERDF through COMPETE2020 (POCI-01–0145-FEDER-031069). One of the authors (Telma Domingues) acknowledges a Ph.D. grant from Fundação para a Ciência e a Tecnologia (FCT) Portugal (SFRH/BD/08181/2020). FCT partially supported University of Minho´s research in the Strategic Funding UIDB/04650/2020.ElsevierUniversidade do MinhoPurwidyantri, AgnesIpatov, AndreyDomingues, TelmaBorme, JérômeMartins, MarcoAlpuim, P.Prado, Marta2022-09-152022-09-15T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/81262engPurwidyantri, A., Ipatov, A., Domingues, T., Borme, J., Martins, M., Alpuim, P., & Prado, M. (2022, September). Programmable graphene-based microfluidic sensor for DNA detection. Sensors and Actuators B: Chemical. Elsevier BV. http://doi.org/10.1016/j.snb.2022.1320440925-400510.1016/j.snb.2022.132044https://www.sciencedirect.com/science/article/pii/S0925400522006864info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:52:31Zoai:repositorium.sdum.uminho.pt:1822/81262Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:51:39.893869Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Programmable graphene-based microfluidic sensor for DNA detection
title Programmable graphene-based microfluidic sensor for DNA detection
spellingShingle Programmable graphene-based microfluidic sensor for DNA detection
Purwidyantri, Agnes
Lab-on-a-chip (LoC)
Graphene field-effect transistor (FET)
Programmable microfluidic
DNA sensor
Engenharia e Tecnologia::Nanotecnologia
Science & Technology
title_short Programmable graphene-based microfluidic sensor for DNA detection
title_full Programmable graphene-based microfluidic sensor for DNA detection
title_fullStr Programmable graphene-based microfluidic sensor for DNA detection
title_full_unstemmed Programmable graphene-based microfluidic sensor for DNA detection
title_sort Programmable graphene-based microfluidic sensor for DNA detection
author Purwidyantri, Agnes
author_facet Purwidyantri, Agnes
Ipatov, Andrey
Domingues, Telma
Borme, Jérôme
Martins, Marco
Alpuim, P.
Prado, Marta
author_role author
author2 Ipatov, Andrey
Domingues, Telma
Borme, Jérôme
Martins, Marco
Alpuim, P.
Prado, Marta
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Purwidyantri, Agnes
Ipatov, Andrey
Domingues, Telma
Borme, Jérôme
Martins, Marco
Alpuim, P.
Prado, Marta
dc.subject.por.fl_str_mv Lab-on-a-chip (LoC)
Graphene field-effect transistor (FET)
Programmable microfluidic
DNA sensor
Engenharia e Tecnologia::Nanotecnologia
Science & Technology
topic Lab-on-a-chip (LoC)
Graphene field-effect transistor (FET)
Programmable microfluidic
DNA sensor
Engenharia e Tecnologia::Nanotecnologia
Science & Technology
description This study presents the development of a lab-on-a-chip (LoC) by integrating a graphene field-effect transistor (FET) chip with a programmable microfluidic device for DNA detection. The real-time biochemical events on the graphene FET chip were monitored through Dirac voltage shift data from the portable graphene curve reader with changes dependent on the fluidic flow into the sensing interface by a fully automated programmable microfluidic system. High sensitivity with high reliability can be obtained with a nine-graphene sensor layout on a single chip. The portable graphene curve reader also provides a tunable electrical parameter setup and straightforward data acquisition. Fluidic control was performed through a multi-position valve, allowing sequential commands for liquid injection into the polydimethylsiloxane (PDMS) flow cell mounted on the sensing chip. The flow cell design with impinging jet geometry and the microfluidic system packaging offer high precision and portability as a less laborious and low-cost sensing setup. The merged system allows for various functionalities, including probe DNA (pDNA) immobilization, a blocking step, and DNA hybridization with stable signal output autonomously, even in a long-run experimental setup. As a DNA sensor, the proposed prototype has demonstrated a high sensitivity of ~44 mV/decade of target DNA concentration, with an outstanding limit of detection (LoD) of ~0.642 aM, making it one of the most sensitive sensors reported up to date. The programmable device has demonstrated essential versatilities for biomolecular detection in a fully portable and automated platform.
publishDate 2022
dc.date.none.fl_str_mv 2022-09-15
2022-09-15T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/1822/81262
url https://hdl.handle.net/1822/81262
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Purwidyantri, A., Ipatov, A., Domingues, T., Borme, J., Martins, M., Alpuim, P., & Prado, M. (2022, September). Programmable graphene-based microfluidic sensor for DNA detection. Sensors and Actuators B: Chemical. Elsevier BV. http://doi.org/10.1016/j.snb.2022.132044
0925-4005
10.1016/j.snb.2022.132044
https://www.sciencedirect.com/science/article/pii/S0925400522006864
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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