Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach

Detalhes bibliográficos
Autor(a) principal: Fonseca, V. G.
Data de Publicação: 2018
Outros Autores: Sinniger, F., Gaspar, J. M., Quince, C., Creer, S., Power, Deborah M., Peck, Lloyd S., Clark, Melody S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/11607
Resumo: An increasing number of studies are showing that Antarctic mega- and macrofauna are highly diverse, however, little is known about meiofaunal biodiversity in sediment communities, which are a vital part of a healthy and functional ecosystem. This is the first study to analyse community DNA (targeting meiofauna) using metabarcoding to investigate biodiversity levels in sediment communities of the Antarctic Peninsula. The results show that almost all of the meiofaunal biodiversity in the benthic habitat has yet to be characterised, levels of biodiversity were higher than expected and similar to temperate regions, albeit with the existence of potentially new and locally adapted species never described before at the molecular level. The Rothera meiofaunal sample sites showed four dominant eukaryotic groups, the nematodes, arthropods, platyhelminthes, and the annelids; some of which could comprise species complexes. Comparisons with deep-sea data from the same region suggest little exchange of Operational Taxonomic Units (OTUs) between depths with the nematodes prevalent at all depths, but sharing the shallow water benthos with the copepods. This study provides a preliminary analysis of benthic Antarctic Peninsula meiofauna using high throughput sequencing which substantiates how little is known on the biodiversity of one of the most diverse, yet underexplored communities of the Antarctic: the benthos.
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spelling Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approachFeeding EcologyPeninsulaCommunityBiodiversityNematodesPatternsShelfVulnerabilityVariabilityMeiobenthosAn increasing number of studies are showing that Antarctic mega- and macrofauna are highly diverse, however, little is known about meiofaunal biodiversity in sediment communities, which are a vital part of a healthy and functional ecosystem. This is the first study to analyse community DNA (targeting meiofauna) using metabarcoding to investigate biodiversity levels in sediment communities of the Antarctic Peninsula. The results show that almost all of the meiofaunal biodiversity in the benthic habitat has yet to be characterised, levels of biodiversity were higher than expected and similar to temperate regions, albeit with the existence of potentially new and locally adapted species never described before at the molecular level. The Rothera meiofaunal sample sites showed four dominant eukaryotic groups, the nematodes, arthropods, platyhelminthes, and the annelids; some of which could comprise species complexes. Comparisons with deep-sea data from the same region suggest little exchange of Operational Taxonomic Units (OTUs) between depths with the nematodes prevalent at all depths, but sharing the shallow water benthos with the copepods. This study provides a preliminary analysis of benthic Antarctic Peninsula meiofauna using high throughput sequencing which substantiates how little is known on the biodiversity of one of the most diverse, yet underexplored communities of the Antarctic: the benthos.NERC within the Polar Sciences for Planet Earth Programme; NERC Antarctic Funding Initiative Collaborative Gearing Scheme [57]; CCMAR from the Portuguese Science Foundation [FCT.UID/Multi/04326/2013]; Portuguese Foundation for Science and Technology (FCT) [SFRH/BPD/80447/2014]; European Community Marie Curie International Incoming Fellowship project MARMEDIV [253251]Nature Publishing GroupSapientiaFonseca, V. G.Sinniger, F.Gaspar, J. M.Quince, C.Creer, S.Power, Deborah M.Peck, Lloyd S.Clark, Melody S.2018-12-07T14:53:38Z2018-032018-03-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/11607eng2045-232210.1038/s41598-017-06687-xinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:23:27Zoai:sapientia.ualg.pt:10400.1/11607Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:03:05.517672Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
spellingShingle Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
Fonseca, V. G.
Feeding Ecology
Peninsula
Community
Biodiversity
Nematodes
Patterns
Shelf
Vulnerability
Variability
Meiobenthos
title_short Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_full Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_fullStr Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_full_unstemmed Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_sort Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
author Fonseca, V. G.
author_facet Fonseca, V. G.
Sinniger, F.
Gaspar, J. M.
Quince, C.
Creer, S.
Power, Deborah M.
Peck, Lloyd S.
Clark, Melody S.
author_role author
author2 Sinniger, F.
Gaspar, J. M.
Quince, C.
Creer, S.
Power, Deborah M.
Peck, Lloyd S.
Clark, Melody S.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Fonseca, V. G.
Sinniger, F.
Gaspar, J. M.
Quince, C.
Creer, S.
Power, Deborah M.
Peck, Lloyd S.
Clark, Melody S.
dc.subject.por.fl_str_mv Feeding Ecology
Peninsula
Community
Biodiversity
Nematodes
Patterns
Shelf
Vulnerability
Variability
Meiobenthos
topic Feeding Ecology
Peninsula
Community
Biodiversity
Nematodes
Patterns
Shelf
Vulnerability
Variability
Meiobenthos
description An increasing number of studies are showing that Antarctic mega- and macrofauna are highly diverse, however, little is known about meiofaunal biodiversity in sediment communities, which are a vital part of a healthy and functional ecosystem. This is the first study to analyse community DNA (targeting meiofauna) using metabarcoding to investigate biodiversity levels in sediment communities of the Antarctic Peninsula. The results show that almost all of the meiofaunal biodiversity in the benthic habitat has yet to be characterised, levels of biodiversity were higher than expected and similar to temperate regions, albeit with the existence of potentially new and locally adapted species never described before at the molecular level. The Rothera meiofaunal sample sites showed four dominant eukaryotic groups, the nematodes, arthropods, platyhelminthes, and the annelids; some of which could comprise species complexes. Comparisons with deep-sea data from the same region suggest little exchange of Operational Taxonomic Units (OTUs) between depths with the nematodes prevalent at all depths, but sharing the shallow water benthos with the copepods. This study provides a preliminary analysis of benthic Antarctic Peninsula meiofauna using high throughput sequencing which substantiates how little is known on the biodiversity of one of the most diverse, yet underexplored communities of the Antarctic: the benthos.
publishDate 2018
dc.date.none.fl_str_mv 2018-12-07T14:53:38Z
2018-03
2018-03-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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format article
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dc.language.iso.fl_str_mv eng
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10.1038/s41598-017-06687-x
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dc.publisher.none.fl_str_mv Nature Publishing Group
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dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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