Diversity and seasonal dynamics of airborne archaea

Detalhes bibliográficos
Autor(a) principal: Fröhlich-Nowoisky, J.
Data de Publicação: 2014
Outros Autores: Ruzene Nespoli, C., Pickersgil, D. A., Galand, P. E., Müller-Germann, I., Nunes, T., Gomes Cardoso, J., Almeida, S. M., Pio, C., Andreae, M. O., Conrad, R., Pöschl, U., Després, V. R.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/22489
Resumo: Archaea are widespread and abundant in many terrestrial and aquatic environments, and are thus outside extreme environments, accounting for up to 10% of the prokaryotes. Compared to bacteria and other microorganisms, however, very little is known about the abundance, diversity, and dispersal of archaea in the atmosphere. By means of DNA analysis and Sanger sequencing targeting the 16S rRNA (435 sequences) and amoA genes in samples of air particulate matter collected over 1 year at a continental sampling site in Germany, we obtained first insights into the seasonal dynamics of airborne archaea. The detected archaea were identified as Thaumarchaeota or Euryarchaeota, with soil Thaumarchaeota (group I.1b) being present in all samples. The normalized species richness of Thaumarchaeota correlated positively with relative humidity and negatively with temperature. This together with an increase in bare agricultural soil surfaces may explain the diversity peaks observed in fall and winter. The detected Euryarchaeota were mainly predicted methanogens with a low relative frequency of occurrence. A slight increase in their frequency during spring may be linked to fertilization processes in the surrounding agricultural fields. Comparison with samples from the Cape Verde islands (72 sequences) and from other coastal and continental sites indicates that the proportions of Euryarchaeota are enhanced in coastal air, which is consistent with their suggested abundance in marine surface waters. We conclude that air transport may play an important role in the dispersal of archaea, including assumed ammonia-oxidizing Thaumarchaeota and methanogens.
id RCAP_df16ccc8f0ee2303f5da7143d1acbd43
oai_identifier_str oai:ria.ua.pt:10773/22489
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Diversity and seasonal dynamics of airborne archaeaArchaea are widespread and abundant in many terrestrial and aquatic environments, and are thus outside extreme environments, accounting for up to 10% of the prokaryotes. Compared to bacteria and other microorganisms, however, very little is known about the abundance, diversity, and dispersal of archaea in the atmosphere. By means of DNA analysis and Sanger sequencing targeting the 16S rRNA (435 sequences) and amoA genes in samples of air particulate matter collected over 1 year at a continental sampling site in Germany, we obtained first insights into the seasonal dynamics of airborne archaea. The detected archaea were identified as Thaumarchaeota or Euryarchaeota, with soil Thaumarchaeota (group I.1b) being present in all samples. The normalized species richness of Thaumarchaeota correlated positively with relative humidity and negatively with temperature. This together with an increase in bare agricultural soil surfaces may explain the diversity peaks observed in fall and winter. The detected Euryarchaeota were mainly predicted methanogens with a low relative frequency of occurrence. A slight increase in their frequency during spring may be linked to fertilization processes in the surrounding agricultural fields. Comparison with samples from the Cape Verde islands (72 sequences) and from other coastal and continental sites indicates that the proportions of Euryarchaeota are enhanced in coastal air, which is consistent with their suggested abundance in marine surface waters. We conclude that air transport may play an important role in the dispersal of archaea, including assumed ammonia-oxidizing Thaumarchaeota and methanogens.European Geosciences Union2018-03-05T12:06:14Z2014-01-01T00:00:00Z2014info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/22489eng1726-417010.5194/bg-11-6067-2014Fröhlich-Nowoisky, J.Ruzene Nespoli, C.Pickersgil, D. A.Galand, P. E.Müller-Germann, I.Nunes, T.Gomes Cardoso, J.Almeida, S. M.Pio, C.Andreae, M. O.Conrad, R.Pöschl, U.Després, V. R.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T11:35:46Zoai:ria.ua.pt:10773/22489Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T02:53:28.670047Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Diversity and seasonal dynamics of airborne archaea
title Diversity and seasonal dynamics of airborne archaea
spellingShingle Diversity and seasonal dynamics of airborne archaea
Fröhlich-Nowoisky, J.
title_short Diversity and seasonal dynamics of airborne archaea
title_full Diversity and seasonal dynamics of airborne archaea
title_fullStr Diversity and seasonal dynamics of airborne archaea
title_full_unstemmed Diversity and seasonal dynamics of airborne archaea
title_sort Diversity and seasonal dynamics of airborne archaea
author Fröhlich-Nowoisky, J.
author_facet Fröhlich-Nowoisky, J.
Ruzene Nespoli, C.
Pickersgil, D. A.
Galand, P. E.
Müller-Germann, I.
Nunes, T.
Gomes Cardoso, J.
Almeida, S. M.
Pio, C.
Andreae, M. O.
Conrad, R.
Pöschl, U.
Després, V. R.
author_role author
author2 Ruzene Nespoli, C.
Pickersgil, D. A.
Galand, P. E.
Müller-Germann, I.
Nunes, T.
Gomes Cardoso, J.
Almeida, S. M.
Pio, C.
Andreae, M. O.
Conrad, R.
Pöschl, U.
Després, V. R.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Fröhlich-Nowoisky, J.
Ruzene Nespoli, C.
Pickersgil, D. A.
Galand, P. E.
Müller-Germann, I.
Nunes, T.
Gomes Cardoso, J.
Almeida, S. M.
Pio, C.
Andreae, M. O.
Conrad, R.
Pöschl, U.
Després, V. R.
description Archaea are widespread and abundant in many terrestrial and aquatic environments, and are thus outside extreme environments, accounting for up to 10% of the prokaryotes. Compared to bacteria and other microorganisms, however, very little is known about the abundance, diversity, and dispersal of archaea in the atmosphere. By means of DNA analysis and Sanger sequencing targeting the 16S rRNA (435 sequences) and amoA genes in samples of air particulate matter collected over 1 year at a continental sampling site in Germany, we obtained first insights into the seasonal dynamics of airborne archaea. The detected archaea were identified as Thaumarchaeota or Euryarchaeota, with soil Thaumarchaeota (group I.1b) being present in all samples. The normalized species richness of Thaumarchaeota correlated positively with relative humidity and negatively with temperature. This together with an increase in bare agricultural soil surfaces may explain the diversity peaks observed in fall and winter. The detected Euryarchaeota were mainly predicted methanogens with a low relative frequency of occurrence. A slight increase in their frequency during spring may be linked to fertilization processes in the surrounding agricultural fields. Comparison with samples from the Cape Verde islands (72 sequences) and from other coastal and continental sites indicates that the proportions of Euryarchaeota are enhanced in coastal air, which is consistent with their suggested abundance in marine surface waters. We conclude that air transport may play an important role in the dispersal of archaea, including assumed ammonia-oxidizing Thaumarchaeota and methanogens.
publishDate 2014
dc.date.none.fl_str_mv 2014-01-01T00:00:00Z
2014
2018-03-05T12:06:14Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10773/22489
url http://hdl.handle.net/10773/22489
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1726-4170
10.5194/bg-11-6067-2014
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv European Geosciences Union
publisher.none.fl_str_mv European Geosciences Union
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799137586372935680