Characterization of the testicular transcriptome of transgenic rat overexpressing regucalcin: insights into (in)fertility

Detalhes bibliográficos
Autor(a) principal: Santos, Vanessa Sofia Mesquita
Data de Publicação: 2018
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.6/9776
Resumo: Regucalcin (RGN) is a highly-conserved calcium (Ca2+)-binding protein, which was initially identified in the rat liver, playing a role in intracellular Ca2+ homeostasis. Over the last years, RGN was identified in several non-reproductive and reproductive tissues and, due to its modulation of Ca2+ levels, and regulation of Ca2+-dependent and -independent enzymes, the panoply of RGN known functions has been widening. RGN has thus also been involved in the regulation of intracellular signaling pathways, oxidative stress and metabolism, as well as important biological processes such as cell proliferation and apoptosis. RGN is encoded by the Rgn gene, identified as an androgen-target gene broadly expressed in all testicular cell types, which for the first linked RGN with male reproduction. More recently, transgenic rats overexpressing RGN (Tg-RGN) have been shown to display increased sperm viability with lower incidence of tail defects, as well as resistance to oxidative stress and to chemical- or radiation-induced apoptosis. Despite the different evidences supporting the beneficial role of RGN in spermatogenesis, the molecular players underlying its actions are not yet known. The present study aimed to identify the pathways and molecular players underlying the cytoprotective actions of RGN in spermatogenesis. For this purpose, the testicular transcriptome of Tg-RGN rats compared to wild-type (Wt) rats was analyzed using an RNA sequencing approach (RNA-seq). Differentially expressed genes were clustered according to their expression pattern, gene ontology (GO) and pathway enrichment analysis. A total of 1064 genes were differentially expressed in the Tg-RGN rats with higher enrichment scores found for GO terms for biological processes such as ion transport or meiotic cell cycle. The obtained information was then filtered considering fold-change, expression level and the potential relevance for spermatogenesis, and 10 genes were selected for real-time quantitative reverse transcription polymerase chain reaction (qPCR) validation of the RNA-seq results. Atp10b, Orai1, Sfrp2 and Tnni1 genes were validated as being up-regulated genes in the testis of Tg-RGN rats, whereas Fign and Sycp1 genes were down-regulated, which suggests their likely role as RGN partners in modulating spermatogenesis. Afterwards, the expression of the 10 selected genes in different types of testicular cells was investigated. For this purpose, a cell line with spermatogonia stem cell characteristics (GC-6spg cells) and primary Sertoli Cells (SCs) isolated from Wt rats were used. Gene expression was assessed by reverse transcription PCR (RT-PCR). All differentially expressed genes, with the exception of Atp10b, were expressed in SCs; Eng, Fign, Orai1, Star, Sycp1 and Tnni1 genes were also detected in GC-6spg cells. Overall, the findings obtained in the present thesis gave a new insight into the molecular mechanisms behind RGN’ actions in the testes and provided the basis for future research exploring and deepening the knowledge about the role of RGN in the regulation of spermatogenesis and male (in)fertility.
id RCAP_e24cfeb497f7caaca7698617dafb05e9
oai_identifier_str oai:ubibliorum.ubi.pt:10400.6/9776
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Characterization of the testicular transcriptome of transgenic rat overexpressing regucalcin: insights into (in)fertilityEspermatogéneseInfertilidade Masculina.RegucalcinaTranscriptoma TesticularDomínio/Área Científica::Ciências Médicas::Ciências BiomédicasRegucalcin (RGN) is a highly-conserved calcium (Ca2+)-binding protein, which was initially identified in the rat liver, playing a role in intracellular Ca2+ homeostasis. Over the last years, RGN was identified in several non-reproductive and reproductive tissues and, due to its modulation of Ca2+ levels, and regulation of Ca2+-dependent and -independent enzymes, the panoply of RGN known functions has been widening. RGN has thus also been involved in the regulation of intracellular signaling pathways, oxidative stress and metabolism, as well as important biological processes such as cell proliferation and apoptosis. RGN is encoded by the Rgn gene, identified as an androgen-target gene broadly expressed in all testicular cell types, which for the first linked RGN with male reproduction. More recently, transgenic rats overexpressing RGN (Tg-RGN) have been shown to display increased sperm viability with lower incidence of tail defects, as well as resistance to oxidative stress and to chemical- or radiation-induced apoptosis. Despite the different evidences supporting the beneficial role of RGN in spermatogenesis, the molecular players underlying its actions are not yet known. The present study aimed to identify the pathways and molecular players underlying the cytoprotective actions of RGN in spermatogenesis. For this purpose, the testicular transcriptome of Tg-RGN rats compared to wild-type (Wt) rats was analyzed using an RNA sequencing approach (RNA-seq). Differentially expressed genes were clustered according to their expression pattern, gene ontology (GO) and pathway enrichment analysis. A total of 1064 genes were differentially expressed in the Tg-RGN rats with higher enrichment scores found for GO terms for biological processes such as ion transport or meiotic cell cycle. The obtained information was then filtered considering fold-change, expression level and the potential relevance for spermatogenesis, and 10 genes were selected for real-time quantitative reverse transcription polymerase chain reaction (qPCR) validation of the RNA-seq results. Atp10b, Orai1, Sfrp2 and Tnni1 genes were validated as being up-regulated genes in the testis of Tg-RGN rats, whereas Fign and Sycp1 genes were down-regulated, which suggests their likely role as RGN partners in modulating spermatogenesis. Afterwards, the expression of the 10 selected genes in different types of testicular cells was investigated. For this purpose, a cell line with spermatogonia stem cell characteristics (GC-6spg cells) and primary Sertoli Cells (SCs) isolated from Wt rats were used. Gene expression was assessed by reverse transcription PCR (RT-PCR). All differentially expressed genes, with the exception of Atp10b, were expressed in SCs; Eng, Fign, Orai1, Star, Sycp1 and Tnni1 genes were also detected in GC-6spg cells. Overall, the findings obtained in the present thesis gave a new insight into the molecular mechanisms behind RGN’ actions in the testes and provided the basis for future research exploring and deepening the knowledge about the role of RGN in the regulation of spermatogenesis and male (in)fertility.A regucalcina (RGN) é uma proteína de ligação ao cálcio (Ca2+) altamente conservada, a qual foi inicialmente identificada no fígado de rato, desempenhando um papel na homeostase do Ca2+ intracelular. Nos últimos anos, a RGN foi identificada em vários tecidos não reprodutivos e reprodutivos e, devido à sua capacidade de modular os níveis de Ca2+, e de regular a atividade de enzimas independentes e dependentes de Ca2+, a panóplia de funções conhecidas da RGN foi sendo alargada. A RGN foi assim sendo envolvida também na regulação da sinalização intracelular, stress oxidativo e metabolismo, assim como em processos biológicos importantes, como proliferação e apoptose. A RGN é codificada pelo gene Rgn, que foi identificado como um gene alvo dos androgénios, o qual é amplamente expresso em todos os tipos de células testiculares, o que pela primeira vez relacionou a RGN com a reprodução masculina. Mais recentemente, foi demonstrado que ratos transgénicos que sobreexpressam a RGN (Tg-RGN) apresentam maior viabilidade espermática, com menor incidência de defeitos na cauda, resistência ao stress oxidativo e apoptose induzida por produtos químicos ou radiação. Apesar das diferentes evidências que suportam o papel benéfico do RGN na espermatogénese, os agentes moleculares subjacentes às suas ações ainda não são conhecidos. O presente estudo teve como objetivo identificar as vias e os agentes moleculares subjacentes às ações citoprotetoras da RGN na espermatogénese. Com este propósito, foi analisado o transcriptoma testicular de ratos Tg-RGN comparativamente com ratos wild-type (Wt) usando uma abordagem de sequenciamento de RNA (RNA-seq). Os genes diferencialmente expressos foram agrupados de acordo com o seu padrão de expressão, ontologia genética (GO) e análises de enriquecimento. Um total de 1064 genes foram diferencialmente expressos em ratos Tg-RGN, tendo-se encontrado os maiores scores de enriquecimento para termos GO de processos biológicos como transporte de iões ou ciclo celular meiótico. A informação obtida foi então filtrada considerando o fold-change, o nível de expressão e a potencial relevância para a espermatogénese, e foram selecionados 10 genes para validação dos resultados do RNA-seq por reação em cadeia da polimerase quantitativa em tempo real (qPCR). Os genes Atp10b, Orai1, Sfrp2 e Tnni1 foram validados como sendo regulados positivamente nos testículos de ratos Tg-RGN, enquanto os genes Fign e Sycp1 foram regulados negativamente, o que sugere o seu provável papel como parceiros da RGN na modulação da espermatogénese. Posteriormente, procedeu-se à análise da expressão dos 10 genes selecionados em diferentes tipos de células testiculares. Com este intuito, utilizou-se uma linha celular com características de células estaminais espermatogoniais (células GC-6spg), e células de Sertoli (SCs) primárias isoladas de ratos Wt. A expressão génica foi avaliada por transcrição reversa por PCR (RT-PCR). Todos os genes diferencialmente expressos, com exceção do Atp10b, foram expressos em SCs; os genes Eng, Fign, Orai1, Star, Sycp1 e Tnni1 foram também detetados nas células GC-6spg. No geral, os resultados obtidos na presente tese deram uma nova visão sobre os mecanismos moleculares por detrás das ações da RGN nos testículos, e forneceram a base para investigação futura no sentido de explorar e aprofundar o conhecimento sobre o papel da RGN na regulação da espermatogénese e na (in)fertilidade masculina.Socorro, Sílvia Cristina da Cruz MarquesPinto, Patrícia Isabel SilvestreCorreia, Sara Carina de LimauBibliorumSantos, Vanessa Sofia Mesquita2020-03-05T17:05:10Z2018-10-262018-10-82018-10-26T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10400.6/9776TID:202354245enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-12-15T09:51:04Zoai:ubibliorum.ubi.pt:10400.6/9776Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T00:49:51.578337Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Characterization of the testicular transcriptome of transgenic rat overexpressing regucalcin: insights into (in)fertility
title Characterization of the testicular transcriptome of transgenic rat overexpressing regucalcin: insights into (in)fertility
spellingShingle Characterization of the testicular transcriptome of transgenic rat overexpressing regucalcin: insights into (in)fertility
Santos, Vanessa Sofia Mesquita
Espermatogénese
Infertilidade Masculina.
Regucalcina
Transcriptoma Testicular
Domínio/Área Científica::Ciências Médicas::Ciências Biomédicas
title_short Characterization of the testicular transcriptome of transgenic rat overexpressing regucalcin: insights into (in)fertility
title_full Characterization of the testicular transcriptome of transgenic rat overexpressing regucalcin: insights into (in)fertility
title_fullStr Characterization of the testicular transcriptome of transgenic rat overexpressing regucalcin: insights into (in)fertility
title_full_unstemmed Characterization of the testicular transcriptome of transgenic rat overexpressing regucalcin: insights into (in)fertility
title_sort Characterization of the testicular transcriptome of transgenic rat overexpressing regucalcin: insights into (in)fertility
author Santos, Vanessa Sofia Mesquita
author_facet Santos, Vanessa Sofia Mesquita
author_role author
dc.contributor.none.fl_str_mv Socorro, Sílvia Cristina da Cruz Marques
Pinto, Patrícia Isabel Silvestre
Correia, Sara Carina de Lima
uBibliorum
dc.contributor.author.fl_str_mv Santos, Vanessa Sofia Mesquita
dc.subject.por.fl_str_mv Espermatogénese
Infertilidade Masculina.
Regucalcina
Transcriptoma Testicular
Domínio/Área Científica::Ciências Médicas::Ciências Biomédicas
topic Espermatogénese
Infertilidade Masculina.
Regucalcina
Transcriptoma Testicular
Domínio/Área Científica::Ciências Médicas::Ciências Biomédicas
description Regucalcin (RGN) is a highly-conserved calcium (Ca2+)-binding protein, which was initially identified in the rat liver, playing a role in intracellular Ca2+ homeostasis. Over the last years, RGN was identified in several non-reproductive and reproductive tissues and, due to its modulation of Ca2+ levels, and regulation of Ca2+-dependent and -independent enzymes, the panoply of RGN known functions has been widening. RGN has thus also been involved in the regulation of intracellular signaling pathways, oxidative stress and metabolism, as well as important biological processes such as cell proliferation and apoptosis. RGN is encoded by the Rgn gene, identified as an androgen-target gene broadly expressed in all testicular cell types, which for the first linked RGN with male reproduction. More recently, transgenic rats overexpressing RGN (Tg-RGN) have been shown to display increased sperm viability with lower incidence of tail defects, as well as resistance to oxidative stress and to chemical- or radiation-induced apoptosis. Despite the different evidences supporting the beneficial role of RGN in spermatogenesis, the molecular players underlying its actions are not yet known. The present study aimed to identify the pathways and molecular players underlying the cytoprotective actions of RGN in spermatogenesis. For this purpose, the testicular transcriptome of Tg-RGN rats compared to wild-type (Wt) rats was analyzed using an RNA sequencing approach (RNA-seq). Differentially expressed genes were clustered according to their expression pattern, gene ontology (GO) and pathway enrichment analysis. A total of 1064 genes were differentially expressed in the Tg-RGN rats with higher enrichment scores found for GO terms for biological processes such as ion transport or meiotic cell cycle. The obtained information was then filtered considering fold-change, expression level and the potential relevance for spermatogenesis, and 10 genes were selected for real-time quantitative reverse transcription polymerase chain reaction (qPCR) validation of the RNA-seq results. Atp10b, Orai1, Sfrp2 and Tnni1 genes were validated as being up-regulated genes in the testis of Tg-RGN rats, whereas Fign and Sycp1 genes were down-regulated, which suggests their likely role as RGN partners in modulating spermatogenesis. Afterwards, the expression of the 10 selected genes in different types of testicular cells was investigated. For this purpose, a cell line with spermatogonia stem cell characteristics (GC-6spg cells) and primary Sertoli Cells (SCs) isolated from Wt rats were used. Gene expression was assessed by reverse transcription PCR (RT-PCR). All differentially expressed genes, with the exception of Atp10b, were expressed in SCs; Eng, Fign, Orai1, Star, Sycp1 and Tnni1 genes were also detected in GC-6spg cells. Overall, the findings obtained in the present thesis gave a new insight into the molecular mechanisms behind RGN’ actions in the testes and provided the basis for future research exploring and deepening the knowledge about the role of RGN in the regulation of spermatogenesis and male (in)fertility.
publishDate 2018
dc.date.none.fl_str_mv 2018-10-26
2018-10-8
2018-10-26T00:00:00Z
2020-03-05T17:05:10Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.6/9776
TID:202354245
url http://hdl.handle.net/10400.6/9776
identifier_str_mv TID:202354245
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799136389721227264