A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection

Detalhes bibliográficos
Autor(a) principal: Faria, Nélson
Data de Publicação: 2023
Outros Autores: Campelos, Sofia, Carvalho, Vítor
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/11110/2791
https://doi.org/Faria, N.; Campelos, S.; Carvalho, V. A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection. Appl. Sci. 2023, 13, 6571. https://doi.org/10.3390/app13116571
Resumo: Lung cancer is a leading cause of cancer-related deaths worldwide, and its diagnosis must be carried out as soon as possible to increase the survival rate. The development of computer-aided diagnosis systems can improve the accuracy of lung cancer diagnosis while reducing the workload of pathologists. The purpose of this study was to develop a learning algorithm (CancerDetecNN) to evaluate the presence or absence of tumor tissue in lung whole-slide images (WSIs) while reducing the computational cost. Three existing deep neural network models, including different versions of the CancerDetecNN algorithm, were trained and tested on datasets of tumor and non-tumor tiles extracted from lung WSIs. The fifth version of CancerDetecNN (CancerDetecNN Version 5) outperformed all existing convolutional neural network (CNN) models in the provided dataset, achieving higher precision (0.972), an area under the curve (AUC) of 0.923, and an F1-score of 0.897, while requiring 1 h and 51 min less for training than the best compared CNN model (ResNet-50). The results for CancerDetecNN Version 5 surpass the results of some architectures used in the literature, but the relatively small size and limited diversity of the dataset used in this study must be considered. This paper demonstrates the potential of CancerDetecNN Version 5 for improving lung cancer diagnosis since it is a dedicated model for lung cancer that leverages domain-specific knowledge and optimized architecture to capture unique characteristics and patterns in lung WSIs, potentially outperforming generic models in this domain and reducing the computational cost.
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spelling A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer DetectionArtificial intelligenceconvolutional neural networkscomputer-aided diagnosisdeep learningearly-stage detectionhistopathologylung cancermedical imagingLung cancer is a leading cause of cancer-related deaths worldwide, and its diagnosis must be carried out as soon as possible to increase the survival rate. The development of computer-aided diagnosis systems can improve the accuracy of lung cancer diagnosis while reducing the workload of pathologists. The purpose of this study was to develop a learning algorithm (CancerDetecNN) to evaluate the presence or absence of tumor tissue in lung whole-slide images (WSIs) while reducing the computational cost. Three existing deep neural network models, including different versions of the CancerDetecNN algorithm, were trained and tested on datasets of tumor and non-tumor tiles extracted from lung WSIs. The fifth version of CancerDetecNN (CancerDetecNN Version 5) outperformed all existing convolutional neural network (CNN) models in the provided dataset, achieving higher precision (0.972), an area under the curve (AUC) of 0.923, and an F1-score of 0.897, while requiring 1 h and 51 min less for training than the best compared CNN model (ResNet-50). The results for CancerDetecNN Version 5 surpass the results of some architectures used in the literature, but the relatively small size and limited diversity of the dataset used in this study must be considered. This paper demonstrates the potential of CancerDetecNN Version 5 for improving lung cancer diagnosis since it is a dedicated model for lung cancer that leverages domain-specific knowledge and optimized architecture to capture unique characteristics and patterns in lung WSIs, potentially outperforming generic models in this domain and reducing the computational cost.This research was funded by FCT/MCTES grant number UIDB/05549/2020.Applied Sciences2024-01-03T14:56:12Z2024-01-032023-05-29T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/11110/2791https://doi.org/Faria, N.; Campelos, S.; Carvalho, V. A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection. Appl. Sci. 2023, 13, 6571. https://doi.org/10.3390/app13116571http://hdl.handle.net/11110/2791engFaria, NélsonCampelos, SofiaCarvalho, Vítorinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-04T05:53:49Zoai:ciencipca.ipca.pt:11110/2791Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:29:17.386293Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection
title A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection
spellingShingle A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection
Faria, Nélson
Artificial intelligence
convolutional neural networks
computer-aided diagnosis
deep learning
early-stage detection
histopathology
lung cancer
medical imaging
title_short A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection
title_full A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection
title_fullStr A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection
title_full_unstemmed A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection
title_sort A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection
author Faria, Nélson
author_facet Faria, Nélson
Campelos, Sofia
Carvalho, Vítor
author_role author
author2 Campelos, Sofia
Carvalho, Vítor
author2_role author
author
dc.contributor.author.fl_str_mv Faria, Nélson
Campelos, Sofia
Carvalho, Vítor
dc.subject.por.fl_str_mv Artificial intelligence
convolutional neural networks
computer-aided diagnosis
deep learning
early-stage detection
histopathology
lung cancer
medical imaging
topic Artificial intelligence
convolutional neural networks
computer-aided diagnosis
deep learning
early-stage detection
histopathology
lung cancer
medical imaging
description Lung cancer is a leading cause of cancer-related deaths worldwide, and its diagnosis must be carried out as soon as possible to increase the survival rate. The development of computer-aided diagnosis systems can improve the accuracy of lung cancer diagnosis while reducing the workload of pathologists. The purpose of this study was to develop a learning algorithm (CancerDetecNN) to evaluate the presence or absence of tumor tissue in lung whole-slide images (WSIs) while reducing the computational cost. Three existing deep neural network models, including different versions of the CancerDetecNN algorithm, were trained and tested on datasets of tumor and non-tumor tiles extracted from lung WSIs. The fifth version of CancerDetecNN (CancerDetecNN Version 5) outperformed all existing convolutional neural network (CNN) models in the provided dataset, achieving higher precision (0.972), an area under the curve (AUC) of 0.923, and an F1-score of 0.897, while requiring 1 h and 51 min less for training than the best compared CNN model (ResNet-50). The results for CancerDetecNN Version 5 surpass the results of some architectures used in the literature, but the relatively small size and limited diversity of the dataset used in this study must be considered. This paper demonstrates the potential of CancerDetecNN Version 5 for improving lung cancer diagnosis since it is a dedicated model for lung cancer that leverages domain-specific knowledge and optimized architecture to capture unique characteristics and patterns in lung WSIs, potentially outperforming generic models in this domain and reducing the computational cost.
publishDate 2023
dc.date.none.fl_str_mv 2023-05-29T00:00:00Z
2024-01-03T14:56:12Z
2024-01-03
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/11110/2791
https://doi.org/Faria, N.; Campelos, S.; Carvalho, V. A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection. Appl. Sci. 2023, 13, 6571. https://doi.org/10.3390/app13116571
http://hdl.handle.net/11110/2791
url http://hdl.handle.net/11110/2791
https://doi.org/Faria, N.; Campelos, S.; Carvalho, V. A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection. Appl. Sci. 2023, 13, 6571. https://doi.org/10.3390/app13116571
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Applied Sciences
publisher.none.fl_str_mv Applied Sciences
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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