A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/11110/2791 https://doi.org/Faria, N.; Campelos, S.; Carvalho, V. A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection. Appl. Sci. 2023, 13, 6571. https://doi.org/10.3390/app13116571 |
Resumo: | Lung cancer is a leading cause of cancer-related deaths worldwide, and its diagnosis must be carried out as soon as possible to increase the survival rate. The development of computer-aided diagnosis systems can improve the accuracy of lung cancer diagnosis while reducing the workload of pathologists. The purpose of this study was to develop a learning algorithm (CancerDetecNN) to evaluate the presence or absence of tumor tissue in lung whole-slide images (WSIs) while reducing the computational cost. Three existing deep neural network models, including different versions of the CancerDetecNN algorithm, were trained and tested on datasets of tumor and non-tumor tiles extracted from lung WSIs. The fifth version of CancerDetecNN (CancerDetecNN Version 5) outperformed all existing convolutional neural network (CNN) models in the provided dataset, achieving higher precision (0.972), an area under the curve (AUC) of 0.923, and an F1-score of 0.897, while requiring 1 h and 51 min less for training than the best compared CNN model (ResNet-50). The results for CancerDetecNN Version 5 surpass the results of some architectures used in the literature, but the relatively small size and limited diversity of the dataset used in this study must be considered. This paper demonstrates the potential of CancerDetecNN Version 5 for improving lung cancer diagnosis since it is a dedicated model for lung cancer that leverages domain-specific knowledge and optimized architecture to capture unique characteristics and patterns in lung WSIs, potentially outperforming generic models in this domain and reducing the computational cost. |
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A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer DetectionArtificial intelligenceconvolutional neural networkscomputer-aided diagnosisdeep learningearly-stage detectionhistopathologylung cancermedical imagingLung cancer is a leading cause of cancer-related deaths worldwide, and its diagnosis must be carried out as soon as possible to increase the survival rate. The development of computer-aided diagnosis systems can improve the accuracy of lung cancer diagnosis while reducing the workload of pathologists. The purpose of this study was to develop a learning algorithm (CancerDetecNN) to evaluate the presence or absence of tumor tissue in lung whole-slide images (WSIs) while reducing the computational cost. Three existing deep neural network models, including different versions of the CancerDetecNN algorithm, were trained and tested on datasets of tumor and non-tumor tiles extracted from lung WSIs. The fifth version of CancerDetecNN (CancerDetecNN Version 5) outperformed all existing convolutional neural network (CNN) models in the provided dataset, achieving higher precision (0.972), an area under the curve (AUC) of 0.923, and an F1-score of 0.897, while requiring 1 h and 51 min less for training than the best compared CNN model (ResNet-50). The results for CancerDetecNN Version 5 surpass the results of some architectures used in the literature, but the relatively small size and limited diversity of the dataset used in this study must be considered. This paper demonstrates the potential of CancerDetecNN Version 5 for improving lung cancer diagnosis since it is a dedicated model for lung cancer that leverages domain-specific knowledge and optimized architecture to capture unique characteristics and patterns in lung WSIs, potentially outperforming generic models in this domain and reducing the computational cost.This research was funded by FCT/MCTES grant number UIDB/05549/2020.Applied Sciences2024-01-03T14:56:12Z2024-01-032023-05-29T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/11110/2791https://doi.org/Faria, N.; Campelos, S.; Carvalho, V. A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection. Appl. Sci. 2023, 13, 6571. https://doi.org/10.3390/app13116571http://hdl.handle.net/11110/2791engFaria, NélsonCampelos, SofiaCarvalho, Vítorinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-04T05:53:49Zoai:ciencipca.ipca.pt:11110/2791Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:29:17.386293Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection |
title |
A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection |
spellingShingle |
A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection Faria, Nélson Artificial intelligence convolutional neural networks computer-aided diagnosis deep learning early-stage detection histopathology lung cancer medical imaging |
title_short |
A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection |
title_full |
A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection |
title_fullStr |
A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection |
title_full_unstemmed |
A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection |
title_sort |
A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection |
author |
Faria, Nélson |
author_facet |
Faria, Nélson Campelos, Sofia Carvalho, Vítor |
author_role |
author |
author2 |
Campelos, Sofia Carvalho, Vítor |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Faria, Nélson Campelos, Sofia Carvalho, Vítor |
dc.subject.por.fl_str_mv |
Artificial intelligence convolutional neural networks computer-aided diagnosis deep learning early-stage detection histopathology lung cancer medical imaging |
topic |
Artificial intelligence convolutional neural networks computer-aided diagnosis deep learning early-stage detection histopathology lung cancer medical imaging |
description |
Lung cancer is a leading cause of cancer-related deaths worldwide, and its diagnosis must be carried out as soon as possible to increase the survival rate. The development of computer-aided diagnosis systems can improve the accuracy of lung cancer diagnosis while reducing the workload of pathologists. The purpose of this study was to develop a learning algorithm (CancerDetecNN) to evaluate the presence or absence of tumor tissue in lung whole-slide images (WSIs) while reducing the computational cost. Three existing deep neural network models, including different versions of the CancerDetecNN algorithm, were trained and tested on datasets of tumor and non-tumor tiles extracted from lung WSIs. The fifth version of CancerDetecNN (CancerDetecNN Version 5) outperformed all existing convolutional neural network (CNN) models in the provided dataset, achieving higher precision (0.972), an area under the curve (AUC) of 0.923, and an F1-score of 0.897, while requiring 1 h and 51 min less for training than the best compared CNN model (ResNet-50). The results for CancerDetecNN Version 5 surpass the results of some architectures used in the literature, but the relatively small size and limited diversity of the dataset used in this study must be considered. This paper demonstrates the potential of CancerDetecNN Version 5 for improving lung cancer diagnosis since it is a dedicated model for lung cancer that leverages domain-specific knowledge and optimized architecture to capture unique characteristics and patterns in lung WSIs, potentially outperforming generic models in this domain and reducing the computational cost. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-05-29T00:00:00Z 2024-01-03T14:56:12Z 2024-01-03 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/11110/2791 https://doi.org/Faria, N.; Campelos, S.; Carvalho, V. A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection. Appl. Sci. 2023, 13, 6571. https://doi.org/10.3390/app13116571 http://hdl.handle.net/11110/2791 |
url |
http://hdl.handle.net/11110/2791 https://doi.org/Faria, N.; Campelos, S.; Carvalho, V. A Novel Convolutional Neural Network Algorithm for Histopathological Lung Cancer Detection. Appl. Sci. 2023, 13, 6571. https://doi.org/10.3390/app13116571 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Applied Sciences |
publisher.none.fl_str_mv |
Applied Sciences |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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