Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates 06 Biological Sciences 0604 Genetics 06 Biological Sciences 0601 Biochemistry and Cell Biology 06 Biological Sciences 0603 Evolutionary Biology

Detalhes bibliográficos
Autor(a) principal: Lopes-Marques M.
Data de Publicação: 2018
Outros Autores: Kabeya N., Qian Y., Ruivo R., Santos M.M., Venkatesh B., Tocher D.R., Castro L.F.C., Monroig O.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/120486
Resumo: Background: Provision of long-chain polyunsaturated fatty acids (LC-PUFA) in vertebrates occurs through the diet or via endogenous production from C18 precursors through consecutive elongations and desaturations. It has been postulated that the abundance of LC-PUFA in the marine environment has remarkably modulated the gene complement and function of Fads in marine teleosts. In vertebrates two fatty acyl desaturases, namely Fads1 and Fads2, encode 5 and 6 desaturases, respectively. To fully clarify the evolutionary history of LC-PUFA biosynthesis in vertebrates, we investigated the gene repertoire and function of Fads from species placed at key evolutionary nodes. Results: We demonstrate that functional Fads1Δ5 and Fads26 arose from a tandem gene duplication in the ancestor of vertebrates, since they are present in the Arctic lamprey. Additionally, we show that a similar condition was retained in ray-finned fish such as the Senegal bichir and spotted gar, with the identification of fads1 genes in these lineages. Functional characterisation of the isolated desaturases reveals the first case of a Fads1 enzyme with 5 desaturase activity in the Teleostei lineage, the Elopomorpha. In contrast, in Osteoglossomorpha genomes, while no fads1 was identified, two separate fads2 duplicates with 6 and 5 desaturase activities respectively were uncovered. Conclusions: We conclude that, while the essential genetic components involved LC-PUFA biosynthesis evolved in the vertebrate ancestor, the full completion of the LC-PUFA biosynthesis pathway arose uniquely in gnathostomes. © 2018 The Author(s).
id RCAP_e5111e26b5bed6c388dde033e1030e31
oai_identifier_str oai:repositorio-aberto.up.pt:10216/120486
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates 06 Biological Sciences 0604 Genetics 06 Biological Sciences 0601 Biochemistry and Cell Biology 06 Biological Sciences 0603 Evolutionary BiologyActinopterygiiElopomorphaLepisosteus oculatusLethenteron japonicumOsteoglossomorphaTeleosteiVertebrataacyl coenzyme A desaturaseunsaturated fatty acidamino acid sequenceanimalbiosynthesischemistryfishgeneticsmetabolismmolecular evolutionphylogenysequence homologyAmino Acid SequenceAnimalsEvolution, MolecularFatty Acid DesaturasesFatty Acids, UnsaturatedFishesPhylogenySequence Homology, Nucleic AcidBackground: Provision of long-chain polyunsaturated fatty acids (LC-PUFA) in vertebrates occurs through the diet or via endogenous production from C18 precursors through consecutive elongations and desaturations. It has been postulated that the abundance of LC-PUFA in the marine environment has remarkably modulated the gene complement and function of Fads in marine teleosts. In vertebrates two fatty acyl desaturases, namely Fads1 and Fads2, encode 5 and 6 desaturases, respectively. To fully clarify the evolutionary history of LC-PUFA biosynthesis in vertebrates, we investigated the gene repertoire and function of Fads from species placed at key evolutionary nodes. Results: We demonstrate that functional Fads1Δ5 and Fads26 arose from a tandem gene duplication in the ancestor of vertebrates, since they are present in the Arctic lamprey. Additionally, we show that a similar condition was retained in ray-finned fish such as the Senegal bichir and spotted gar, with the identification of fads1 genes in these lineages. Functional characterisation of the isolated desaturases reveals the first case of a Fads1 enzyme with 5 desaturase activity in the Teleostei lineage, the Elopomorpha. In contrast, in Osteoglossomorpha genomes, while no fads1 was identified, two separate fads2 duplicates with 6 and 5 desaturase activities respectively were uncovered. Conclusions: We conclude that, while the essential genetic components involved LC-PUFA biosynthesis evolved in the vertebrate ancestor, the full completion of the LC-PUFA biosynthesis pathway arose uniquely in gnathostomes. © 2018 The Author(s).BMC20182018-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10216/120486eng1471214810.1186/s12862-018-1271-5Lopes-Marques M.Kabeya N.Qian Y.Ruivo R.Santos M.M.Venkatesh B.Tocher D.R.Castro L.F.C.Monroig O.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-09-27T09:29:01Zoai:repositorio-aberto.up.pt:10216/120486Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-09-27T09:29:01Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates 06 Biological Sciences 0604 Genetics 06 Biological Sciences 0601 Biochemistry and Cell Biology 06 Biological Sciences 0603 Evolutionary Biology
title Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates 06 Biological Sciences 0604 Genetics 06 Biological Sciences 0601 Biochemistry and Cell Biology 06 Biological Sciences 0603 Evolutionary Biology
spellingShingle Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates 06 Biological Sciences 0604 Genetics 06 Biological Sciences 0601 Biochemistry and Cell Biology 06 Biological Sciences 0603 Evolutionary Biology
Lopes-Marques M.
Actinopterygii
Elopomorpha
Lepisosteus oculatus
Lethenteron japonicum
Osteoglossomorpha
Teleostei
Vertebrata
acyl coenzyme A desaturase
unsaturated fatty acid
amino acid sequence
animal
biosynthesis
chemistry
fish
genetics
metabolism
molecular evolution
phylogeny
sequence homology
Amino Acid Sequence
Animals
Evolution, Molecular
Fatty Acid Desaturases
Fatty Acids, Unsaturated
Fishes
Phylogeny
Sequence Homology, Nucleic Acid
title_short Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates 06 Biological Sciences 0604 Genetics 06 Biological Sciences 0601 Biochemistry and Cell Biology 06 Biological Sciences 0603 Evolutionary Biology
title_full Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates 06 Biological Sciences 0604 Genetics 06 Biological Sciences 0601 Biochemistry and Cell Biology 06 Biological Sciences 0603 Evolutionary Biology
title_fullStr Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates 06 Biological Sciences 0604 Genetics 06 Biological Sciences 0601 Biochemistry and Cell Biology 06 Biological Sciences 0603 Evolutionary Biology
title_full_unstemmed Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates 06 Biological Sciences 0604 Genetics 06 Biological Sciences 0601 Biochemistry and Cell Biology 06 Biological Sciences 0603 Evolutionary Biology
title_sort Retention of fatty acyl desaturase 1 (fads1) in Elopomorpha and Cyclostomata provides novel insights into the evolution of long-chain polyunsaturated fatty acid biosynthesis in vertebrates 06 Biological Sciences 0604 Genetics 06 Biological Sciences 0601 Biochemistry and Cell Biology 06 Biological Sciences 0603 Evolutionary Biology
author Lopes-Marques M.
author_facet Lopes-Marques M.
Kabeya N.
Qian Y.
Ruivo R.
Santos M.M.
Venkatesh B.
Tocher D.R.
Castro L.F.C.
Monroig O.
author_role author
author2 Kabeya N.
Qian Y.
Ruivo R.
Santos M.M.
Venkatesh B.
Tocher D.R.
Castro L.F.C.
Monroig O.
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Lopes-Marques M.
Kabeya N.
Qian Y.
Ruivo R.
Santos M.M.
Venkatesh B.
Tocher D.R.
Castro L.F.C.
Monroig O.
dc.subject.por.fl_str_mv Actinopterygii
Elopomorpha
Lepisosteus oculatus
Lethenteron japonicum
Osteoglossomorpha
Teleostei
Vertebrata
acyl coenzyme A desaturase
unsaturated fatty acid
amino acid sequence
animal
biosynthesis
chemistry
fish
genetics
metabolism
molecular evolution
phylogeny
sequence homology
Amino Acid Sequence
Animals
Evolution, Molecular
Fatty Acid Desaturases
Fatty Acids, Unsaturated
Fishes
Phylogeny
Sequence Homology, Nucleic Acid
topic Actinopterygii
Elopomorpha
Lepisosteus oculatus
Lethenteron japonicum
Osteoglossomorpha
Teleostei
Vertebrata
acyl coenzyme A desaturase
unsaturated fatty acid
amino acid sequence
animal
biosynthesis
chemistry
fish
genetics
metabolism
molecular evolution
phylogeny
sequence homology
Amino Acid Sequence
Animals
Evolution, Molecular
Fatty Acid Desaturases
Fatty Acids, Unsaturated
Fishes
Phylogeny
Sequence Homology, Nucleic Acid
description Background: Provision of long-chain polyunsaturated fatty acids (LC-PUFA) in vertebrates occurs through the diet or via endogenous production from C18 precursors through consecutive elongations and desaturations. It has been postulated that the abundance of LC-PUFA in the marine environment has remarkably modulated the gene complement and function of Fads in marine teleosts. In vertebrates two fatty acyl desaturases, namely Fads1 and Fads2, encode 5 and 6 desaturases, respectively. To fully clarify the evolutionary history of LC-PUFA biosynthesis in vertebrates, we investigated the gene repertoire and function of Fads from species placed at key evolutionary nodes. Results: We demonstrate that functional Fads1Δ5 and Fads26 arose from a tandem gene duplication in the ancestor of vertebrates, since they are present in the Arctic lamprey. Additionally, we show that a similar condition was retained in ray-finned fish such as the Senegal bichir and spotted gar, with the identification of fads1 genes in these lineages. Functional characterisation of the isolated desaturases reveals the first case of a Fads1 enzyme with 5 desaturase activity in the Teleostei lineage, the Elopomorpha. In contrast, in Osteoglossomorpha genomes, while no fads1 was identified, two separate fads2 duplicates with 6 and 5 desaturase activities respectively were uncovered. Conclusions: We conclude that, while the essential genetic components involved LC-PUFA biosynthesis evolved in the vertebrate ancestor, the full completion of the LC-PUFA biosynthesis pathway arose uniquely in gnathostomes. © 2018 The Author(s).
publishDate 2018
dc.date.none.fl_str_mv 2018
2018-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/10216/120486
url https://hdl.handle.net/10216/120486
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 14712148
10.1186/s12862-018-1271-5
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv BMC
publisher.none.fl_str_mv BMC
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv mluisa.alvim@gmail.com
_version_ 1817548321362804736