Closed Shortest Path in the Original Coordinates with an Application to Breast Cancer

Detalhes bibliográficos
Autor(a) principal: Jaime Cardoso
Data de Publicação: 2015
Outros Autores: Domingues,I, Hélder Filipe Oliveira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://repositorio.inesctec.pt/handle/123456789/3765
http://dx.doi.org/10.1142/s0218001415550022
Resumo: Breast cancer is one of the most mediated malignant diseases, because of its high incidence and prevalence, but principally due to its physical and psychological invasiveness. The study of this disease using computer science tools resorts often to the image segmentation operation. Image segmentation, although having been extensively studied, is still an open problem. Shortest path algorithms are extensively used to tackle this problem. There are, however, applications where the starting and ending positions of the shortest path need to be constrained, defining a closed contour enclosing a previously detected seed. Mass and calcification segmentation in mammograms and areola segmentation in digital images are two particular examples of interest within the field of breast cancer research. Usually the closed contour computation is addressed by transforming the image into polar coordinates, where the closed contour is transformed into an open contour between two opposite margins. In this work, after illustrating some of the limitations of this approach, we show how to compute the closed contour in the original coordinate space. After defining a directed acyclic graph appropriate for this task, we address the main difficulty in operating in the original coordinate space. Since small paths collapsing in the seed point are naturally favored, we modulate the cost of the edges to counterbalance this bias. A thorough evaluation is conducted with datasets from the breast cancer field. The algorithm is shown to be fast and reliable and suffers no loss in resolution.
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spelling Closed Shortest Path in the Original Coordinates with an Application to Breast CancerBreast cancer is one of the most mediated malignant diseases, because of its high incidence and prevalence, but principally due to its physical and psychological invasiveness. The study of this disease using computer science tools resorts often to the image segmentation operation. Image segmentation, although having been extensively studied, is still an open problem. Shortest path algorithms are extensively used to tackle this problem. There are, however, applications where the starting and ending positions of the shortest path need to be constrained, defining a closed contour enclosing a previously detected seed. Mass and calcification segmentation in mammograms and areola segmentation in digital images are two particular examples of interest within the field of breast cancer research. Usually the closed contour computation is addressed by transforming the image into polar coordinates, where the closed contour is transformed into an open contour between two opposite margins. In this work, after illustrating some of the limitations of this approach, we show how to compute the closed contour in the original coordinate space. After defining a directed acyclic graph appropriate for this task, we address the main difficulty in operating in the original coordinate space. Since small paths collapsing in the seed point are naturally favored, we modulate the cost of the edges to counterbalance this bias. A thorough evaluation is conducted with datasets from the breast cancer field. The algorithm is shown to be fast and reliable and suffers no loss in resolution.2017-11-23T11:31:32Z2015-01-01T00:00:00Z2015info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://repositorio.inesctec.pt/handle/123456789/3765http://dx.doi.org/10.1142/s0218001415550022engJaime CardosoDomingues,IHélder Filipe Oliveirainfo:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-05-15T10:19:58Zoai:repositorio.inesctec.pt:123456789/3765Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T17:52:30.834273Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Closed Shortest Path in the Original Coordinates with an Application to Breast Cancer
title Closed Shortest Path in the Original Coordinates with an Application to Breast Cancer
spellingShingle Closed Shortest Path in the Original Coordinates with an Application to Breast Cancer
Jaime Cardoso
title_short Closed Shortest Path in the Original Coordinates with an Application to Breast Cancer
title_full Closed Shortest Path in the Original Coordinates with an Application to Breast Cancer
title_fullStr Closed Shortest Path in the Original Coordinates with an Application to Breast Cancer
title_full_unstemmed Closed Shortest Path in the Original Coordinates with an Application to Breast Cancer
title_sort Closed Shortest Path in the Original Coordinates with an Application to Breast Cancer
author Jaime Cardoso
author_facet Jaime Cardoso
Domingues,I
Hélder Filipe Oliveira
author_role author
author2 Domingues,I
Hélder Filipe Oliveira
author2_role author
author
dc.contributor.author.fl_str_mv Jaime Cardoso
Domingues,I
Hélder Filipe Oliveira
description Breast cancer is one of the most mediated malignant diseases, because of its high incidence and prevalence, but principally due to its physical and psychological invasiveness. The study of this disease using computer science tools resorts often to the image segmentation operation. Image segmentation, although having been extensively studied, is still an open problem. Shortest path algorithms are extensively used to tackle this problem. There are, however, applications where the starting and ending positions of the shortest path need to be constrained, defining a closed contour enclosing a previously detected seed. Mass and calcification segmentation in mammograms and areola segmentation in digital images are two particular examples of interest within the field of breast cancer research. Usually the closed contour computation is addressed by transforming the image into polar coordinates, where the closed contour is transformed into an open contour between two opposite margins. In this work, after illustrating some of the limitations of this approach, we show how to compute the closed contour in the original coordinate space. After defining a directed acyclic graph appropriate for this task, we address the main difficulty in operating in the original coordinate space. Since small paths collapsing in the seed point are naturally favored, we modulate the cost of the edges to counterbalance this bias. A thorough evaluation is conducted with datasets from the breast cancer field. The algorithm is shown to be fast and reliable and suffers no loss in resolution.
publishDate 2015
dc.date.none.fl_str_mv 2015-01-01T00:00:00Z
2015
2017-11-23T11:31:32Z
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http://dx.doi.org/10.1142/s0218001415550022
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