Performance of polycarbonate, cellulose nitrate and polyethersulfone filtering membranes for culture-independent microbiota analysis of clean waters

Detalhes bibliográficos
Autor(a) principal: Abreu-Silva, Joana
Data de Publicação: 2023
Outros Autores: Ribeirinho-Soares, Sara, Oliveira-Inocêncio, Inês, Pedrosa, Marta, Silva, Adrián M. T., Nunes, Olga C., Manaia, Célia M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.14/39736
Resumo: Demineralized and disinfected waters may have very low microbial loads, requiring that large volumes of water are filtered to recover enough biomass for further analysis. Extended filtration periods, often interrupted by clogging, are a major limiting factor to concentrate samples' microbiota for further examination, besides hindering the work pace. In this study, we investigated the performance of three types of filtering membranes - polycarbonate (PC), cellulose nitrate (CN), and polyethersulfone (PES) with 0.22 μm pore size for culture-independent microbiological analysis (quantitative PCR of seven housekeeping and integrase genes) of tap water, recirculating tap water in a bottle washing loop, and of demineralized water. Compared to PC membranes, CN or PES required lower filtration periods, although had slightly lower DNA extraction yields. However, genes abundance per volume of water was, in general, not significantly different. The exception was observed for bottle washing water in which PC membranes supported significantly higher quantification values than PES membranes. These differences were lower than ∼0.5 log-units and did not hamper the distinction of the types of water based on genes profile. Also, the type of membrane did not significantly affect the profile of the bacterial community determined for tap and demineralized water. A major conclusion is that CN membranes, cheaper, allowing shorter filtration periods, and producing results that are not significantly different from those obtained with PC or PES, can be a good alternative to analyze waters with low biomass loads.
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spelling Performance of polycarbonate, cellulose nitrate and polyethersulfone filtering membranes for culture-independent microbiota analysis of clean watersCellulose nitrate (CN)Clean watersFilter membranesMicrobiological analysisPolycarbonate (PC)Polyethersulfone (PES)Demineralized and disinfected waters may have very low microbial loads, requiring that large volumes of water are filtered to recover enough biomass for further analysis. Extended filtration periods, often interrupted by clogging, are a major limiting factor to concentrate samples' microbiota for further examination, besides hindering the work pace. In this study, we investigated the performance of three types of filtering membranes - polycarbonate (PC), cellulose nitrate (CN), and polyethersulfone (PES) with 0.22 μm pore size for culture-independent microbiological analysis (quantitative PCR of seven housekeeping and integrase genes) of tap water, recirculating tap water in a bottle washing loop, and of demineralized water. Compared to PC membranes, CN or PES required lower filtration periods, although had slightly lower DNA extraction yields. However, genes abundance per volume of water was, in general, not significantly different. The exception was observed for bottle washing water in which PC membranes supported significantly higher quantification values than PES membranes. These differences were lower than ∼0.5 log-units and did not hamper the distinction of the types of water based on genes profile. Also, the type of membrane did not significantly affect the profile of the bacterial community determined for tap and demineralized water. A major conclusion is that CN membranes, cheaper, allowing shorter filtration periods, and producing results that are not significantly different from those obtained with PC or PES, can be a good alternative to analyze waters with low biomass loads.Veritati - Repositório Institucional da Universidade Católica PortuguesaAbreu-Silva, JoanaRibeirinho-Soares, SaraOliveira-Inocêncio, InêsPedrosa, MartaSilva, Adrián M. T.Nunes, Olga C.Manaia, Célia M.2023-01-04T18:09:30Z2023-022023-02-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.14/39736eng2213-343710.1016/j.jece.2022.10913285144426112000901816800002info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-12T17:45:17Zoai:repositorio.ucp.pt:10400.14/39736Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:32:31.712307Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Performance of polycarbonate, cellulose nitrate and polyethersulfone filtering membranes for culture-independent microbiota analysis of clean waters
title Performance of polycarbonate, cellulose nitrate and polyethersulfone filtering membranes for culture-independent microbiota analysis of clean waters
spellingShingle Performance of polycarbonate, cellulose nitrate and polyethersulfone filtering membranes for culture-independent microbiota analysis of clean waters
Abreu-Silva, Joana
Cellulose nitrate (CN)
Clean waters
Filter membranes
Microbiological analysis
Polycarbonate (PC)
Polyethersulfone (PES)
title_short Performance of polycarbonate, cellulose nitrate and polyethersulfone filtering membranes for culture-independent microbiota analysis of clean waters
title_full Performance of polycarbonate, cellulose nitrate and polyethersulfone filtering membranes for culture-independent microbiota analysis of clean waters
title_fullStr Performance of polycarbonate, cellulose nitrate and polyethersulfone filtering membranes for culture-independent microbiota analysis of clean waters
title_full_unstemmed Performance of polycarbonate, cellulose nitrate and polyethersulfone filtering membranes for culture-independent microbiota analysis of clean waters
title_sort Performance of polycarbonate, cellulose nitrate and polyethersulfone filtering membranes for culture-independent microbiota analysis of clean waters
author Abreu-Silva, Joana
author_facet Abreu-Silva, Joana
Ribeirinho-Soares, Sara
Oliveira-Inocêncio, Inês
Pedrosa, Marta
Silva, Adrián M. T.
Nunes, Olga C.
Manaia, Célia M.
author_role author
author2 Ribeirinho-Soares, Sara
Oliveira-Inocêncio, Inês
Pedrosa, Marta
Silva, Adrián M. T.
Nunes, Olga C.
Manaia, Célia M.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Veritati - Repositório Institucional da Universidade Católica Portuguesa
dc.contributor.author.fl_str_mv Abreu-Silva, Joana
Ribeirinho-Soares, Sara
Oliveira-Inocêncio, Inês
Pedrosa, Marta
Silva, Adrián M. T.
Nunes, Olga C.
Manaia, Célia M.
dc.subject.por.fl_str_mv Cellulose nitrate (CN)
Clean waters
Filter membranes
Microbiological analysis
Polycarbonate (PC)
Polyethersulfone (PES)
topic Cellulose nitrate (CN)
Clean waters
Filter membranes
Microbiological analysis
Polycarbonate (PC)
Polyethersulfone (PES)
description Demineralized and disinfected waters may have very low microbial loads, requiring that large volumes of water are filtered to recover enough biomass for further analysis. Extended filtration periods, often interrupted by clogging, are a major limiting factor to concentrate samples' microbiota for further examination, besides hindering the work pace. In this study, we investigated the performance of three types of filtering membranes - polycarbonate (PC), cellulose nitrate (CN), and polyethersulfone (PES) with 0.22 μm pore size for culture-independent microbiological analysis (quantitative PCR of seven housekeeping and integrase genes) of tap water, recirculating tap water in a bottle washing loop, and of demineralized water. Compared to PC membranes, CN or PES required lower filtration periods, although had slightly lower DNA extraction yields. However, genes abundance per volume of water was, in general, not significantly different. The exception was observed for bottle washing water in which PC membranes supported significantly higher quantification values than PES membranes. These differences were lower than ∼0.5 log-units and did not hamper the distinction of the types of water based on genes profile. Also, the type of membrane did not significantly affect the profile of the bacterial community determined for tap and demineralized water. A major conclusion is that CN membranes, cheaper, allowing shorter filtration periods, and producing results that are not significantly different from those obtained with PC or PES, can be a good alternative to analyze waters with low biomass loads.
publishDate 2023
dc.date.none.fl_str_mv 2023-01-04T18:09:30Z
2023-02
2023-02-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.14/39736
url http://hdl.handle.net/10400.14/39736
dc.language.iso.fl_str_mv eng
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dc.relation.none.fl_str_mv 2213-3437
10.1016/j.jece.2022.109132
85144426112
000901816800002
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dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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