Prevalence of resistance associated polymorphisms in Plasmodium falciparum field isolates from southern Pakistan

Detalhes bibliográficos
Autor(a) principal: Ghanchi, Najia Karim
Data de Publicação: 2011
Outros Autores: Ursing, Johan, Beg, Mohammad A., Veiga, Maria I., Jafri, Sana, Martensson, Andreas
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/11381
Resumo: Background: Scarce data are available on Plasmodium falciparum anti-malarial drug resistance in Pakistan. The aim of this study was, therefore, to determine the prevalence of P. falciparum resistance associated polymorphisms in field isolates from southern Pakistan. Methods: Blood samples from 244 patients with blood-slide confirmed P. falciparum mono-infections were collected between 2005-2007. Single nucleotide polymorphisms in the P. falciparum chloroquine resistance transporter (pfcrt K76T), multi drug resistance (pfmdr1 N86Y), dihydrofolate reductase (pfdhfr A16V, N51I, C59R, S108N, I164L) and dihydropteroate synthetase (pfdhps A436S, G437A and E540K) genes and pfmdr1 gene copy numbers were determined using PCR based methods. Results: The prevalence of pfcrt 76T and pfmdr1 86Y was 93% and 57%, respectively. The prevalence of pfdhfr double mutations 59R + 108N/51R + 108N was 92%. The pfdhfr triple mutation (51I, 59R, 108N) occurred in 3% of samples. The pfdhfr (51I, 59R, 108N) and pfdhps (437G, 540E) quintuple mutation was found in one isolate. Pfdhps 437G was observed in 51% and 540E in 1% of the isolates. One isolate had two pfmdr1 copies and carried the pfmdr1 86Y and pfcrt 76T alleles. Conclusions: The results indicate high prevalence of in vivo resistance to chloroquine, whereas high grade resistance to sulphadoxine-pyrimethamine does not appear to be widespread among P. falciparum in southern Pakistan.
id RCAP_e939f5328e0fb757250c37a84d15da94
oai_identifier_str oai:sapientia.ualg.pt:10400.1/11381
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Prevalence of resistance associated polymorphisms in Plasmodium falciparum field isolates from southern PakistanIn-vivo selectionSulfadoxine-PyrimethamineDihydropteroate synthaseDihydrofolate-reductaseArtemether-LumefantrineChloroquine resistanceMalaria parasitesPfmdr1 GeneMutationsPfcrtBackground: Scarce data are available on Plasmodium falciparum anti-malarial drug resistance in Pakistan. The aim of this study was, therefore, to determine the prevalence of P. falciparum resistance associated polymorphisms in field isolates from southern Pakistan. Methods: Blood samples from 244 patients with blood-slide confirmed P. falciparum mono-infections were collected between 2005-2007. Single nucleotide polymorphisms in the P. falciparum chloroquine resistance transporter (pfcrt K76T), multi drug resistance (pfmdr1 N86Y), dihydrofolate reductase (pfdhfr A16V, N51I, C59R, S108N, I164L) and dihydropteroate synthetase (pfdhps A436S, G437A and E540K) genes and pfmdr1 gene copy numbers were determined using PCR based methods. Results: The prevalence of pfcrt 76T and pfmdr1 86Y was 93% and 57%, respectively. The prevalence of pfdhfr double mutations 59R + 108N/51R + 108N was 92%. The pfdhfr triple mutation (51I, 59R, 108N) occurred in 3% of samples. The pfdhfr (51I, 59R, 108N) and pfdhps (437G, 540E) quintuple mutation was found in one isolate. Pfdhps 437G was observed in 51% and 540E in 1% of the isolates. One isolate had two pfmdr1 copies and carried the pfmdr1 86Y and pfcrt 76T alleles. Conclusions: The results indicate high prevalence of in vivo resistance to chloroquine, whereas high grade resistance to sulphadoxine-pyrimethamine does not appear to be widespread among P. falciparum in southern Pakistan.University Research Council [051012]; Aga Khan University; Fundacao para a Ciencia e Tecnologia, Portugal [SFRH/BD/28393/2006]BMCSapientiaGhanchi, Najia KarimUrsing, JohanBeg, Mohammad A.Veiga, Maria I.Jafri, SanaMartensson, Andreas2018-12-07T14:53:10Z2011-012011-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/11381eng1475-287510.1186/1475-2875-10-18info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:23:11Zoai:sapientia.ualg.pt:10400.1/11381Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:02:54.161269Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Prevalence of resistance associated polymorphisms in Plasmodium falciparum field isolates from southern Pakistan
title Prevalence of resistance associated polymorphisms in Plasmodium falciparum field isolates from southern Pakistan
spellingShingle Prevalence of resistance associated polymorphisms in Plasmodium falciparum field isolates from southern Pakistan
Ghanchi, Najia Karim
In-vivo selection
Sulfadoxine-Pyrimethamine
Dihydropteroate synthase
Dihydrofolate-reductase
Artemether-Lumefantrine
Chloroquine resistance
Malaria parasites
Pfmdr1 Gene
Mutations
Pfcrt
title_short Prevalence of resistance associated polymorphisms in Plasmodium falciparum field isolates from southern Pakistan
title_full Prevalence of resistance associated polymorphisms in Plasmodium falciparum field isolates from southern Pakistan
title_fullStr Prevalence of resistance associated polymorphisms in Plasmodium falciparum field isolates from southern Pakistan
title_full_unstemmed Prevalence of resistance associated polymorphisms in Plasmodium falciparum field isolates from southern Pakistan
title_sort Prevalence of resistance associated polymorphisms in Plasmodium falciparum field isolates from southern Pakistan
author Ghanchi, Najia Karim
author_facet Ghanchi, Najia Karim
Ursing, Johan
Beg, Mohammad A.
Veiga, Maria I.
Jafri, Sana
Martensson, Andreas
author_role author
author2 Ursing, Johan
Beg, Mohammad A.
Veiga, Maria I.
Jafri, Sana
Martensson, Andreas
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Ghanchi, Najia Karim
Ursing, Johan
Beg, Mohammad A.
Veiga, Maria I.
Jafri, Sana
Martensson, Andreas
dc.subject.por.fl_str_mv In-vivo selection
Sulfadoxine-Pyrimethamine
Dihydropteroate synthase
Dihydrofolate-reductase
Artemether-Lumefantrine
Chloroquine resistance
Malaria parasites
Pfmdr1 Gene
Mutations
Pfcrt
topic In-vivo selection
Sulfadoxine-Pyrimethamine
Dihydropteroate synthase
Dihydrofolate-reductase
Artemether-Lumefantrine
Chloroquine resistance
Malaria parasites
Pfmdr1 Gene
Mutations
Pfcrt
description Background: Scarce data are available on Plasmodium falciparum anti-malarial drug resistance in Pakistan. The aim of this study was, therefore, to determine the prevalence of P. falciparum resistance associated polymorphisms in field isolates from southern Pakistan. Methods: Blood samples from 244 patients with blood-slide confirmed P. falciparum mono-infections were collected between 2005-2007. Single nucleotide polymorphisms in the P. falciparum chloroquine resistance transporter (pfcrt K76T), multi drug resistance (pfmdr1 N86Y), dihydrofolate reductase (pfdhfr A16V, N51I, C59R, S108N, I164L) and dihydropteroate synthetase (pfdhps A436S, G437A and E540K) genes and pfmdr1 gene copy numbers were determined using PCR based methods. Results: The prevalence of pfcrt 76T and pfmdr1 86Y was 93% and 57%, respectively. The prevalence of pfdhfr double mutations 59R + 108N/51R + 108N was 92%. The pfdhfr triple mutation (51I, 59R, 108N) occurred in 3% of samples. The pfdhfr (51I, 59R, 108N) and pfdhps (437G, 540E) quintuple mutation was found in one isolate. Pfdhps 437G was observed in 51% and 540E in 1% of the isolates. One isolate had two pfmdr1 copies and carried the pfmdr1 86Y and pfcrt 76T alleles. Conclusions: The results indicate high prevalence of in vivo resistance to chloroquine, whereas high grade resistance to sulphadoxine-pyrimethamine does not appear to be widespread among P. falciparum in southern Pakistan.
publishDate 2011
dc.date.none.fl_str_mv 2011-01
2011-01-01T00:00:00Z
2018-12-07T14:53:10Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/11381
url http://hdl.handle.net/10400.1/11381
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1475-2875
10.1186/1475-2875-10-18
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv BMC
publisher.none.fl_str_mv BMC
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799133263410757632