Epiphitic microbiome of Alvarinho wine grapes from different geographic regions in Portugal

Detalhes bibliográficos
Autor(a) principal: Fernandes, Paulo
Data de Publicação: 2023
Outros Autores: Afonso, Isabel Maria, Pereira, Jéssica, Rocha, Rui, Rodrigues, Ana Sofia
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/20.500.11960/3601
Resumo: Geographic location and, particularly, soil and climate exert influence on the typicality of a wine from a specific region, which is often justified by the terroir, and these factors also influence the epiphytic flora associated with the surface of the grape berries. In the present study, the microbiome associated with the surface of berries obtained from ten vineyards of the Alvarinho variety located in different geographical locations in mainland Portugal was determined and analyzed. The removal of microbial flora from the surface of the berries was carried out by washing and sonication, after which the extraction and purification of the respective DNA was carried out. High-throughput short amplicon sequencing of the fungal ITS region and the bacterial 16S region was performed, allowing for the determination of the microbial consortium associated with Alvarinho wine grapes. Analysis of α-diversity demonstrated that parcels from the Monção and Melgaço sub-region present a significantly (p < 0.05) lower fungal diversity and species richness when compared to the plots analyzed from other regions/sub-regions. The ubiquitous presence of Metschnikowia spp., a yeast with enologic potential interest in all parcels from Monção and Melgaço, was also observed.
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spelling Epiphitic microbiome of Alvarinho wine grapes from different geographic regions in PortugalGrape microbiomeAlvarinhoMetagenomicTerroirGeographic location and, particularly, soil and climate exert influence on the typicality of a wine from a specific region, which is often justified by the terroir, and these factors also influence the epiphytic flora associated with the surface of the grape berries. In the present study, the microbiome associated with the surface of berries obtained from ten vineyards of the Alvarinho variety located in different geographical locations in mainland Portugal was determined and analyzed. The removal of microbial flora from the surface of the berries was carried out by washing and sonication, after which the extraction and purification of the respective DNA was carried out. High-throughput short amplicon sequencing of the fungal ITS region and the bacterial 16S region was performed, allowing for the determination of the microbial consortium associated with Alvarinho wine grapes. Analysis of α-diversity demonstrated that parcels from the Monção and Melgaço sub-region present a significantly (p < 0.05) lower fungal diversity and species richness when compared to the plots analyzed from other regions/sub-regions. The ubiquitous presence of Metschnikowia spp., a yeast with enologic potential interest in all parcels from Monção and Melgaço, was also observed.2023-10-30T18:15:11Z2023-01-18T00:00:00Z2023-01-182023-10-28T12:45:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/20.500.11960/3601eng2079-773710.3390/biology12020146Fernandes, PauloAfonso, Isabel MariaPereira, JéssicaRocha, RuiRodrigues, Ana Sofiainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-02T07:35:44Zoai:repositorio.ipvc.pt:20.500.11960/3601Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:26:29.946147Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Epiphitic microbiome of Alvarinho wine grapes from different geographic regions in Portugal
title Epiphitic microbiome of Alvarinho wine grapes from different geographic regions in Portugal
spellingShingle Epiphitic microbiome of Alvarinho wine grapes from different geographic regions in Portugal
Fernandes, Paulo
Grape microbiome
Alvarinho
Metagenomic
Terroir
title_short Epiphitic microbiome of Alvarinho wine grapes from different geographic regions in Portugal
title_full Epiphitic microbiome of Alvarinho wine grapes from different geographic regions in Portugal
title_fullStr Epiphitic microbiome of Alvarinho wine grapes from different geographic regions in Portugal
title_full_unstemmed Epiphitic microbiome of Alvarinho wine grapes from different geographic regions in Portugal
title_sort Epiphitic microbiome of Alvarinho wine grapes from different geographic regions in Portugal
author Fernandes, Paulo
author_facet Fernandes, Paulo
Afonso, Isabel Maria
Pereira, Jéssica
Rocha, Rui
Rodrigues, Ana Sofia
author_role author
author2 Afonso, Isabel Maria
Pereira, Jéssica
Rocha, Rui
Rodrigues, Ana Sofia
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Fernandes, Paulo
Afonso, Isabel Maria
Pereira, Jéssica
Rocha, Rui
Rodrigues, Ana Sofia
dc.subject.por.fl_str_mv Grape microbiome
Alvarinho
Metagenomic
Terroir
topic Grape microbiome
Alvarinho
Metagenomic
Terroir
description Geographic location and, particularly, soil and climate exert influence on the typicality of a wine from a specific region, which is often justified by the terroir, and these factors also influence the epiphytic flora associated with the surface of the grape berries. In the present study, the microbiome associated with the surface of berries obtained from ten vineyards of the Alvarinho variety located in different geographical locations in mainland Portugal was determined and analyzed. The removal of microbial flora from the surface of the berries was carried out by washing and sonication, after which the extraction and purification of the respective DNA was carried out. High-throughput short amplicon sequencing of the fungal ITS region and the bacterial 16S region was performed, allowing for the determination of the microbial consortium associated with Alvarinho wine grapes. Analysis of α-diversity demonstrated that parcels from the Monção and Melgaço sub-region present a significantly (p < 0.05) lower fungal diversity and species richness when compared to the plots analyzed from other regions/sub-regions. The ubiquitous presence of Metschnikowia spp., a yeast with enologic potential interest in all parcels from Monção and Melgaço, was also observed.
publishDate 2023
dc.date.none.fl_str_mv 2023-10-30T18:15:11Z
2023-01-18T00:00:00Z
2023-01-18
2023-10-28T12:45:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/20.500.11960/3601
url http://hdl.handle.net/20.500.11960/3601
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2079-7737
10.3390/biology12020146
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