Positive epistasis drives the acquisition of multidrug resistance

Detalhes bibliográficos
Autor(a) principal: Trindade, S.
Data de Publicação: 2009
Outros Autores: Sousa, A., Xavier, K.B., Dionísio, F., Ferreira, M.G., Gordo, I.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/32
Resumo: The evolution of multiple antibiotic resistance is an increasing global problem. Resistance mutations are known to impair fitness, and the evolution of resistance to multiple drugs depends both on their costs individually and on how they interact--epistasis. Information on the level of epistasis between antibiotic resistance mutations is of key importance to understanding epistasis amongst deleterious alleles, a key theoretical question, and to improving public health measures. Here we show that in an antibiotic-free environment the cost of multiple resistance is smaller than expected, a signature of pervasive positive epistasis among alleles that confer resistance to antibiotics. Competition assays reveal that the cost of resistance to a given antibiotic is dependent on the presence of resistance alleles for other antibiotics. Surprisingly we find that a significant fraction of resistant mutations can be beneficial in certain resistant genetic backgrounds, that some double resistances entail no measurable cost, and that some allelic combinations are hotspots for rapid compensation. These results provide additional insight as to why multi-resistant bacteria are so prevalent and reveal an extra layer of complexity on epistatic patterns previously unrecognized, since it is hidden in genome-wide studies of genetic interactions using gene knockouts
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spelling Positive epistasis drives the acquisition of multidrug resistanceEpistasis, GeneticEvolution, MolecularDrug Resistance, Multiple, BacterialThe evolution of multiple antibiotic resistance is an increasing global problem. Resistance mutations are known to impair fitness, and the evolution of resistance to multiple drugs depends both on their costs individually and on how they interact--epistasis. Information on the level of epistasis between antibiotic resistance mutations is of key importance to understanding epistasis amongst deleterious alleles, a key theoretical question, and to improving public health measures. Here we show that in an antibiotic-free environment the cost of multiple resistance is smaller than expected, a signature of pervasive positive epistasis among alleles that confer resistance to antibiotics. Competition assays reveal that the cost of resistance to a given antibiotic is dependent on the presence of resistance alleles for other antibiotics. Surprisingly we find that a significant fraction of resistant mutations can be beneficial in certain resistant genetic backgrounds, that some double resistances entail no measurable cost, and that some allelic combinations are hotspots for rapid compensation. These results provide additional insight as to why multi-resistant bacteria are so prevalent and reveal an extra layer of complexity on epistatic patterns previously unrecognized, since it is hidden in genome-wide studies of genetic interactions using gene knockoutsARCATrindade, S.Sousa, A.Xavier, K.B.Dionísio, F.Ferreira, M.G.Gordo, I.2009-09-29T16:56:44Z2009-072009-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.7/32engTrindade S, Sousa A, Xavier KB, Dionisio F, Ferreira MG, Gordo I. (2009). "Positive epistasis drives the acquisition of multidrug resistance".Plos Genetics. 5(7): e10005781553-7404https://doi.org/10.1371/journal.pgen.1000578info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:34:34Zoai:arca.igc.gulbenkian.pt:10400.7/32Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:32.177966Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Positive epistasis drives the acquisition of multidrug resistance
title Positive epistasis drives the acquisition of multidrug resistance
spellingShingle Positive epistasis drives the acquisition of multidrug resistance
Trindade, S.
Epistasis, Genetic
Evolution, Molecular
Drug Resistance, Multiple, Bacterial
title_short Positive epistasis drives the acquisition of multidrug resistance
title_full Positive epistasis drives the acquisition of multidrug resistance
title_fullStr Positive epistasis drives the acquisition of multidrug resistance
title_full_unstemmed Positive epistasis drives the acquisition of multidrug resistance
title_sort Positive epistasis drives the acquisition of multidrug resistance
author Trindade, S.
author_facet Trindade, S.
Sousa, A.
Xavier, K.B.
Dionísio, F.
Ferreira, M.G.
Gordo, I.
author_role author
author2 Sousa, A.
Xavier, K.B.
Dionísio, F.
Ferreira, M.G.
Gordo, I.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv Trindade, S.
Sousa, A.
Xavier, K.B.
Dionísio, F.
Ferreira, M.G.
Gordo, I.
dc.subject.por.fl_str_mv Epistasis, Genetic
Evolution, Molecular
Drug Resistance, Multiple, Bacterial
topic Epistasis, Genetic
Evolution, Molecular
Drug Resistance, Multiple, Bacterial
description The evolution of multiple antibiotic resistance is an increasing global problem. Resistance mutations are known to impair fitness, and the evolution of resistance to multiple drugs depends both on their costs individually and on how they interact--epistasis. Information on the level of epistasis between antibiotic resistance mutations is of key importance to understanding epistasis amongst deleterious alleles, a key theoretical question, and to improving public health measures. Here we show that in an antibiotic-free environment the cost of multiple resistance is smaller than expected, a signature of pervasive positive epistasis among alleles that confer resistance to antibiotics. Competition assays reveal that the cost of resistance to a given antibiotic is dependent on the presence of resistance alleles for other antibiotics. Surprisingly we find that a significant fraction of resistant mutations can be beneficial in certain resistant genetic backgrounds, that some double resistances entail no measurable cost, and that some allelic combinations are hotspots for rapid compensation. These results provide additional insight as to why multi-resistant bacteria are so prevalent and reveal an extra layer of complexity on epistatic patterns previously unrecognized, since it is hidden in genome-wide studies of genetic interactions using gene knockouts
publishDate 2009
dc.date.none.fl_str_mv 2009-09-29T16:56:44Z
2009-07
2009-07-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/32
url http://hdl.handle.net/10400.7/32
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Trindade S, Sousa A, Xavier KB, Dionisio F, Ferreira MG, Gordo I. (2009). "Positive epistasis drives the acquisition of multidrug resistance".Plos Genetics. 5(7): e1000578
1553-7404
https://doi.org/10.1371/journal.pgen.1000578
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