The impact of comet assay data normalization in human biomonitoring studies outcomes

Detalhes bibliográficos
Autor(a) principal: Esteves, Filipa
Data de Publicação: 2020
Outros Autores: Amaro, Raquel, Silva, Susana, Sánchez-Flores, María, Teixeira, João Paulo, Costa, Carla
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/7223
Resumo: The comet assay has been extensively used in biomonitoring studies. To avoid intra-experimental variability, the incorporation of assay controls in each work session for data normalization has been suggested by some authors but has never been thoroughly analyzed. The aim of this study was to address the impact of data normalization in the results of a biomonitoring study using different normalization models. Human peripheral blood mononuclear cells (PBMC) from 140 healthy individuals were analyzed using the alkaline and FPG-modified version of the comet assay across seven different work sessions. In addition to negative standards, methyl methanesulfonate (MMS) and Ro 19−8022 plus light treated PBMC, were also included in the assay as positive standards. To verify the impact of data normalization, some demographic, lifestyle and environmental exposure-related variables were selected. Significant associations with independent study variables were observed using normalized comet endpoints, as opposed to raw data. After normalization, levels of DNA strand breaks were significantly higher among males and older individuals (>71 years), while net FPG-sensitive sites were positively related to smoking habits and environmental exposures (i.e. air pollution and bottled water consumption). This study highlights how the normalization strategies can influence the statistical results of a human biomonitoring study and lead to different data interpretations.
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spelling The impact of comet assay data normalization in human biomonitoring studies outcomesData NormalizationAssay ControlsComet AssayHuman BiomonitoringFPGToxicologiaThe comet assay has been extensively used in biomonitoring studies. To avoid intra-experimental variability, the incorporation of assay controls in each work session for data normalization has been suggested by some authors but has never been thoroughly analyzed. The aim of this study was to address the impact of data normalization in the results of a biomonitoring study using different normalization models. Human peripheral blood mononuclear cells (PBMC) from 140 healthy individuals were analyzed using the alkaline and FPG-modified version of the comet assay across seven different work sessions. In addition to negative standards, methyl methanesulfonate (MMS) and Ro 19−8022 plus light treated PBMC, were also included in the assay as positive standards. To verify the impact of data normalization, some demographic, lifestyle and environmental exposure-related variables were selected. Significant associations with independent study variables were observed using normalized comet endpoints, as opposed to raw data. After normalization, levels of DNA strand breaks were significantly higher among males and older individuals (>71 years), while net FPG-sensitive sites were positively related to smoking habits and environmental exposures (i.e. air pollution and bottled water consumption). This study highlights how the normalization strategies can influence the statistical results of a human biomonitoring study and lead to different data interpretations.This work was supported by Project NORTE-01-0145-FEDER000010 - Health, Comfort and Energy in the Built Environment (HEBE), cofinanced by Programa Operacional Regional do Norte (NORTE2020), through Fundo Europeu de Desenvolvimento Regional (FEDER). Carla Costa is supported by the FCT post-doctoral grant SFRH/BPD/96196/2013. The authors would also like to acknowledge the contribution of the hCOMET CA15132 COST Action.Elsevier/ EUROTOXRepositório Científico do Instituto Nacional de SaúdeEsteves, FilipaAmaro, RaquelSilva, SusanaSánchez-Flores, MaríaTeixeira, João PauloCosta, Carla2020-10-27T19:09:00Z2020-07-012020-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/7223engToxicol Lett. 2020 Oct 10;332:56-64. doi: 10.1016/j.toxlet.2020.06.024. Epub 2020 Jul 10378-427410.1016/j.toxlet.2020.06.024info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:41:52Zoai:repositorio.insa.pt:10400.18/7223Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:41:52.231928Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv The impact of comet assay data normalization in human biomonitoring studies outcomes
title The impact of comet assay data normalization in human biomonitoring studies outcomes
spellingShingle The impact of comet assay data normalization in human biomonitoring studies outcomes
Esteves, Filipa
Data Normalization
Assay Controls
Comet Assay
Human Biomonitoring
FPG
Toxicologia
title_short The impact of comet assay data normalization in human biomonitoring studies outcomes
title_full The impact of comet assay data normalization in human biomonitoring studies outcomes
title_fullStr The impact of comet assay data normalization in human biomonitoring studies outcomes
title_full_unstemmed The impact of comet assay data normalization in human biomonitoring studies outcomes
title_sort The impact of comet assay data normalization in human biomonitoring studies outcomes
author Esteves, Filipa
author_facet Esteves, Filipa
Amaro, Raquel
Silva, Susana
Sánchez-Flores, María
Teixeira, João Paulo
Costa, Carla
author_role author
author2 Amaro, Raquel
Silva, Susana
Sánchez-Flores, María
Teixeira, João Paulo
Costa, Carla
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv Esteves, Filipa
Amaro, Raquel
Silva, Susana
Sánchez-Flores, María
Teixeira, João Paulo
Costa, Carla
dc.subject.por.fl_str_mv Data Normalization
Assay Controls
Comet Assay
Human Biomonitoring
FPG
Toxicologia
topic Data Normalization
Assay Controls
Comet Assay
Human Biomonitoring
FPG
Toxicologia
description The comet assay has been extensively used in biomonitoring studies. To avoid intra-experimental variability, the incorporation of assay controls in each work session for data normalization has been suggested by some authors but has never been thoroughly analyzed. The aim of this study was to address the impact of data normalization in the results of a biomonitoring study using different normalization models. Human peripheral blood mononuclear cells (PBMC) from 140 healthy individuals were analyzed using the alkaline and FPG-modified version of the comet assay across seven different work sessions. In addition to negative standards, methyl methanesulfonate (MMS) and Ro 19−8022 plus light treated PBMC, were also included in the assay as positive standards. To verify the impact of data normalization, some demographic, lifestyle and environmental exposure-related variables were selected. Significant associations with independent study variables were observed using normalized comet endpoints, as opposed to raw data. After normalization, levels of DNA strand breaks were significantly higher among males and older individuals (>71 years), while net FPG-sensitive sites were positively related to smoking habits and environmental exposures (i.e. air pollution and bottled water consumption). This study highlights how the normalization strategies can influence the statistical results of a human biomonitoring study and lead to different data interpretations.
publishDate 2020
dc.date.none.fl_str_mv 2020-10-27T19:09:00Z
2020-07-01
2020-07-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/7223
url http://hdl.handle.net/10400.18/7223
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Toxicol Lett. 2020 Oct 10;332:56-64. doi: 10.1016/j.toxlet.2020.06.024. Epub 2020 Jul 1
0378-4274
10.1016/j.toxlet.2020.06.024
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dc.publisher.none.fl_str_mv Elsevier/ EUROTOX
publisher.none.fl_str_mv Elsevier/ EUROTOX
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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