The impact of comet assay data normalization in human biomonitoring studies outcomes
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.18/7223 |
Resumo: | The comet assay has been extensively used in biomonitoring studies. To avoid intra-experimental variability, the incorporation of assay controls in each work session for data normalization has been suggested by some authors but has never been thoroughly analyzed. The aim of this study was to address the impact of data normalization in the results of a biomonitoring study using different normalization models. Human peripheral blood mononuclear cells (PBMC) from 140 healthy individuals were analyzed using the alkaline and FPG-modified version of the comet assay across seven different work sessions. In addition to negative standards, methyl methanesulfonate (MMS) and Ro 19−8022 plus light treated PBMC, were also included in the assay as positive standards. To verify the impact of data normalization, some demographic, lifestyle and environmental exposure-related variables were selected. Significant associations with independent study variables were observed using normalized comet endpoints, as opposed to raw data. After normalization, levels of DNA strand breaks were significantly higher among males and older individuals (>71 years), while net FPG-sensitive sites were positively related to smoking habits and environmental exposures (i.e. air pollution and bottled water consumption). This study highlights how the normalization strategies can influence the statistical results of a human biomonitoring study and lead to different data interpretations. |
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The impact of comet assay data normalization in human biomonitoring studies outcomesData NormalizationAssay ControlsComet AssayHuman BiomonitoringFPGToxicologiaThe comet assay has been extensively used in biomonitoring studies. To avoid intra-experimental variability, the incorporation of assay controls in each work session for data normalization has been suggested by some authors but has never been thoroughly analyzed. The aim of this study was to address the impact of data normalization in the results of a biomonitoring study using different normalization models. Human peripheral blood mononuclear cells (PBMC) from 140 healthy individuals were analyzed using the alkaline and FPG-modified version of the comet assay across seven different work sessions. In addition to negative standards, methyl methanesulfonate (MMS) and Ro 19−8022 plus light treated PBMC, were also included in the assay as positive standards. To verify the impact of data normalization, some demographic, lifestyle and environmental exposure-related variables were selected. Significant associations with independent study variables were observed using normalized comet endpoints, as opposed to raw data. After normalization, levels of DNA strand breaks were significantly higher among males and older individuals (>71 years), while net FPG-sensitive sites were positively related to smoking habits and environmental exposures (i.e. air pollution and bottled water consumption). This study highlights how the normalization strategies can influence the statistical results of a human biomonitoring study and lead to different data interpretations.This work was supported by Project NORTE-01-0145-FEDER000010 - Health, Comfort and Energy in the Built Environment (HEBE), cofinanced by Programa Operacional Regional do Norte (NORTE2020), through Fundo Europeu de Desenvolvimento Regional (FEDER). Carla Costa is supported by the FCT post-doctoral grant SFRH/BPD/96196/2013. The authors would also like to acknowledge the contribution of the hCOMET CA15132 COST Action.Elsevier/ EUROTOXRepositório Científico do Instituto Nacional de SaúdeEsteves, FilipaAmaro, RaquelSilva, SusanaSánchez-Flores, MaríaTeixeira, João PauloCosta, Carla2020-10-27T19:09:00Z2020-07-012020-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/7223engToxicol Lett. 2020 Oct 10;332:56-64. doi: 10.1016/j.toxlet.2020.06.024. Epub 2020 Jul 10378-427410.1016/j.toxlet.2020.06.024info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:41:52Zoai:repositorio.insa.pt:10400.18/7223Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:41:52.231928Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
The impact of comet assay data normalization in human biomonitoring studies outcomes |
title |
The impact of comet assay data normalization in human biomonitoring studies outcomes |
spellingShingle |
The impact of comet assay data normalization in human biomonitoring studies outcomes Esteves, Filipa Data Normalization Assay Controls Comet Assay Human Biomonitoring FPG Toxicologia |
title_short |
The impact of comet assay data normalization in human biomonitoring studies outcomes |
title_full |
The impact of comet assay data normalization in human biomonitoring studies outcomes |
title_fullStr |
The impact of comet assay data normalization in human biomonitoring studies outcomes |
title_full_unstemmed |
The impact of comet assay data normalization in human biomonitoring studies outcomes |
title_sort |
The impact of comet assay data normalization in human biomonitoring studies outcomes |
author |
Esteves, Filipa |
author_facet |
Esteves, Filipa Amaro, Raquel Silva, Susana Sánchez-Flores, María Teixeira, João Paulo Costa, Carla |
author_role |
author |
author2 |
Amaro, Raquel Silva, Susana Sánchez-Flores, María Teixeira, João Paulo Costa, Carla |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Repositório Científico do Instituto Nacional de Saúde |
dc.contributor.author.fl_str_mv |
Esteves, Filipa Amaro, Raquel Silva, Susana Sánchez-Flores, María Teixeira, João Paulo Costa, Carla |
dc.subject.por.fl_str_mv |
Data Normalization Assay Controls Comet Assay Human Biomonitoring FPG Toxicologia |
topic |
Data Normalization Assay Controls Comet Assay Human Biomonitoring FPG Toxicologia |
description |
The comet assay has been extensively used in biomonitoring studies. To avoid intra-experimental variability, the incorporation of assay controls in each work session for data normalization has been suggested by some authors but has never been thoroughly analyzed. The aim of this study was to address the impact of data normalization in the results of a biomonitoring study using different normalization models. Human peripheral blood mononuclear cells (PBMC) from 140 healthy individuals were analyzed using the alkaline and FPG-modified version of the comet assay across seven different work sessions. In addition to negative standards, methyl methanesulfonate (MMS) and Ro 19−8022 plus light treated PBMC, were also included in the assay as positive standards. To verify the impact of data normalization, some demographic, lifestyle and environmental exposure-related variables were selected. Significant associations with independent study variables were observed using normalized comet endpoints, as opposed to raw data. After normalization, levels of DNA strand breaks were significantly higher among males and older individuals (>71 years), while net FPG-sensitive sites were positively related to smoking habits and environmental exposures (i.e. air pollution and bottled water consumption). This study highlights how the normalization strategies can influence the statistical results of a human biomonitoring study and lead to different data interpretations. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-10-27T19:09:00Z 2020-07-01 2020-07-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.18/7223 |
url |
http://hdl.handle.net/10400.18/7223 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Toxicol Lett. 2020 Oct 10;332:56-64. doi: 10.1016/j.toxlet.2020.06.024. Epub 2020 Jul 1 0378-4274 10.1016/j.toxlet.2020.06.024 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/embargoedAccess |
eu_rights_str_mv |
embargoedAccess |
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application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier/ EUROTOX |
publisher.none.fl_str_mv |
Elsevier/ EUROTOX |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1817553529414352896 |