Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic review

Detalhes bibliográficos
Autor(a) principal: Torres, Helena
Data de Publicação: 2018
Outros Autores: Queirós, Sandro, Morais, Pedro, Oliveira, Bruno, Fonseca, Jaime, Vilaça, João
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/11110/1413
Resumo: Background and objective: Segmentation is an essential step in computer-aided diagnosis and treatment planning of kidney diseases. In recent years, several researchers proposed multiple techniques to segment the kidney in medical images from distinct imaging acquisition systems, namely ultrasound, magnetic resonance, and computed tomography. This article aims to present a systematic review of the different methodologies developed for kidney segmentation. Methods: With this work, it is intended to analyze and categorize the different kidney segmentation algo- rithms, establishing a comparison between them and discussing the most appropriate methods for each modality. For that, articles published between 2010 and 2016 were analyzed. The search was performed in Scopus and Web of Science using the expressions “kidney segmentation” and “renal segmentation”. Results: A total of 1528 articles were retrieved from the databases, and 95 articles were selected for this review. After analysis of the selected articles, the reviewed segmentation techniques were categorized according to their theoretical approach. Conclusions: Based on the performed analysis, it was possible to identify segmentation approaches based on distinct image processing classes that can be used to accurately segment the kidney in images of different imaging modalities. Nevertheless, further research on kidney segmentation must be conducted to overcome the current drawbacks of the state-of-the-art methods. Moreover, a standardization of the evaluation database and metrics is needed to allow a direct comparison between methods.
id RCAP_efa52aa0dbc2121f223af08fb128423b
oai_identifier_str oai:ciencipca.ipca.pt:11110/1413
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic reviewComputed tomographyKidney segmentationMagnetic resonance imagingSystematic reviewUltrasound imagingBackground and objective: Segmentation is an essential step in computer-aided diagnosis and treatment planning of kidney diseases. In recent years, several researchers proposed multiple techniques to segment the kidney in medical images from distinct imaging acquisition systems, namely ultrasound, magnetic resonance, and computed tomography. This article aims to present a systematic review of the different methodologies developed for kidney segmentation. Methods: With this work, it is intended to analyze and categorize the different kidney segmentation algo- rithms, establishing a comparison between them and discussing the most appropriate methods for each modality. For that, articles published between 2010 and 2016 were analyzed. The search was performed in Scopus and Web of Science using the expressions “kidney segmentation” and “renal segmentation”. Results: A total of 1528 articles were retrieved from the databases, and 95 articles were selected for this review. After analysis of the selected articles, the reviewed segmentation techniques were categorized according to their theoretical approach. Conclusions: Based on the performed analysis, it was possible to identify segmentation approaches based on distinct image processing classes that can be used to accurately segment the kidney in images of different imaging modalities. Nevertheless, further research on kidney segmentation must be conducted to overcome the current drawbacks of the state-of-the-art methods. Moreover, a standardization of the evaluation database and metrics is needed to allow a direct comparison between methods.This work was funded by projects NORTE-01-0145-FEDER- 000013, and NORTE-01-0145-FEDER-024300, supported by North- ern Portugal Regional Operational Programme (Norte2020), un- der the Portugal 2020 Partnership Agreement, through the Euro- pean Regional Development Fund (FEDER), and also been funded by FEDER funds, through Competitiveness Factors Operational Pro- gramme (COMPETE), and by national funds, through the FCT—Fundação para a Ciência e Tecnologia, under the scope of the project POCI-01-0145-FEDER-007038. The authors acknowledge FCT—Fundação para a Ciência e a Tecnologia, Portugal, and the European Social Found, European Union, for funding support through the Programa Operacional Capital Humano (POCH) in the scope of the PhD grants SFRH/BD/93443/2013 (S. Queirós) and SFRH/BD/95438/2013 (P. Morais).Computer Methods and Programs in Biomedicine2018-09-12T13:45:36Z2018-01-10T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/11110/1413oai:ciencipca.ipca.pt:11110/1413eng0169-2607https://doi.org/DOI: https://doi.org/10.1016/j.cmpb.2018.01.014http://hdl.handle.net/11110/1413metadata only accessinfo:eu-repo/semantics/openAccessTorres, HelenaQueirós, SandroMorais, PedroOliveira, BrunoFonseca, JaimeVilaça, Joãoreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-09-05T12:52:51Zoai:ciencipca.ipca.pt:11110/1413Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:01:47.203777Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic review
title Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic review
spellingShingle Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic review
Torres, Helena
Computed tomography
Kidney segmentation
Magnetic resonance imaging
Systematic review
Ultrasound imaging
title_short Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic review
title_full Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic review
title_fullStr Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic review
title_full_unstemmed Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic review
title_sort Kidney segmentation in ultrasound, magnetic resonance and computed tomography images: A systematic review
author Torres, Helena
author_facet Torres, Helena
Queirós, Sandro
Morais, Pedro
Oliveira, Bruno
Fonseca, Jaime
Vilaça, João
author_role author
author2 Queirós, Sandro
Morais, Pedro
Oliveira, Bruno
Fonseca, Jaime
Vilaça, João
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Torres, Helena
Queirós, Sandro
Morais, Pedro
Oliveira, Bruno
Fonseca, Jaime
Vilaça, João
dc.subject.por.fl_str_mv Computed tomography
Kidney segmentation
Magnetic resonance imaging
Systematic review
Ultrasound imaging
topic Computed tomography
Kidney segmentation
Magnetic resonance imaging
Systematic review
Ultrasound imaging
description Background and objective: Segmentation is an essential step in computer-aided diagnosis and treatment planning of kidney diseases. In recent years, several researchers proposed multiple techniques to segment the kidney in medical images from distinct imaging acquisition systems, namely ultrasound, magnetic resonance, and computed tomography. This article aims to present a systematic review of the different methodologies developed for kidney segmentation. Methods: With this work, it is intended to analyze and categorize the different kidney segmentation algo- rithms, establishing a comparison between them and discussing the most appropriate methods for each modality. For that, articles published between 2010 and 2016 were analyzed. The search was performed in Scopus and Web of Science using the expressions “kidney segmentation” and “renal segmentation”. Results: A total of 1528 articles were retrieved from the databases, and 95 articles were selected for this review. After analysis of the selected articles, the reviewed segmentation techniques were categorized according to their theoretical approach. Conclusions: Based on the performed analysis, it was possible to identify segmentation approaches based on distinct image processing classes that can be used to accurately segment the kidney in images of different imaging modalities. Nevertheless, further research on kidney segmentation must be conducted to overcome the current drawbacks of the state-of-the-art methods. Moreover, a standardization of the evaluation database and metrics is needed to allow a direct comparison between methods.
publishDate 2018
dc.date.none.fl_str_mv 2018-09-12T13:45:36Z
2018-01-10T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/11110/1413
oai:ciencipca.ipca.pt:11110/1413
url http://hdl.handle.net/11110/1413
identifier_str_mv oai:ciencipca.ipca.pt:11110/1413
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0169-2607
https://doi.org/DOI: https://doi.org/10.1016/j.cmpb.2018.01.014
http://hdl.handle.net/11110/1413
dc.rights.driver.fl_str_mv metadata only access
info:eu-repo/semantics/openAccess
rights_invalid_str_mv metadata only access
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Computer Methods and Programs in Biomedicine
publisher.none.fl_str_mv Computer Methods and Programs in Biomedicine
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799129887464751104