Genetic analysis as a tool to improve the monitoring of stranded cetaceans in Chile

Detalhes bibliográficos
Autor(a) principal: Kraft, Sebastian
Data de Publicação: 2023
Outros Autores: Rodríguez, Francisca, Olavarría, Carlos, Poulin, Elie, Pérez-Álvarez, María José
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/19831
Resumo: Cetacean strandings are regularly recorded along the coast of Chile. However, crucial information such as species and sex of the individuals involved in these events can often be difficult to assess. In this context, the use of molecular tools as a complementary method can improve a stranding database, particularly by correcting misidentifications and providing new data for unidentified samples. This new information is especially important in the case of species that are poorly known or of high conservation interest. In this study, we evaluate how molecular tools can support and complement the field work records of strandings in Chile by identifying, corroborating, or correcting the identification of the species and sex of the recorded individuals. We obtained samples through a collaboration with the government agency that is in charge of assisting with cetacean strandings and collected the relevant information. Multidisciplinary approaches like this, and inter-institutional collaborations, can improve the study of cetacean strandings and the decisions in management and conservation policies around them. Cetacean strandings are a valuable source of information for several studies from species richness to conservation and management. During the examination of strandings, taxonomic and sex identification might be hindered for several reasons. Molecular techniques are valuable tools to obtain that missing information. This study evaluates how gene fragment amplification protocols can support the records of strandings done in the field in Chile by identifying, corroborating, or correcting the identification of the species and sex of the recorded individuals. Through a collaboration between a scientific laboratory and government institution in Chile, 63 samples were analyzed. Thirty-nine samples were successfully identified to the species level. In total, 17 species of six families were detected, including six species of conservation interest. Of the 39 samples, 29 corresponded to corroborations of field identifications. Seven corresponded to unidentified samples and three to corrected misidentifications, adding up to 28% of the identified samples. Sex was successfully identified for 58 of the 63 individuals. Twenty were corroborations, 34 were previously unidentified, and four were corrections. Applying this method improves the stranding database of Chile and provides new data for future management and conservation tasks.
id RCAP_f98efd558ece0443f81b135baae9f143
oai_identifier_str oai:sapientia.ualg.pt:10400.1/19831
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Genetic analysis as a tool to improve the monitoring of stranded cetaceans in ChileStranding recordGovernment institutionSpecies and sex identificationMultidisciplinary approachConservationManagementCetacean strandings are regularly recorded along the coast of Chile. However, crucial information such as species and sex of the individuals involved in these events can often be difficult to assess. In this context, the use of molecular tools as a complementary method can improve a stranding database, particularly by correcting misidentifications and providing new data for unidentified samples. This new information is especially important in the case of species that are poorly known or of high conservation interest. In this study, we evaluate how molecular tools can support and complement the field work records of strandings in Chile by identifying, corroborating, or correcting the identification of the species and sex of the recorded individuals. We obtained samples through a collaboration with the government agency that is in charge of assisting with cetacean strandings and collected the relevant information. Multidisciplinary approaches like this, and inter-institutional collaborations, can improve the study of cetacean strandings and the decisions in management and conservation policies around them. Cetacean strandings are a valuable source of information for several studies from species richness to conservation and management. During the examination of strandings, taxonomic and sex identification might be hindered for several reasons. Molecular techniques are valuable tools to obtain that missing information. This study evaluates how gene fragment amplification protocols can support the records of strandings done in the field in Chile by identifying, corroborating, or correcting the identification of the species and sex of the recorded individuals. Through a collaboration between a scientific laboratory and government institution in Chile, 63 samples were analyzed. Thirty-nine samples were successfully identified to the species level. In total, 17 species of six families were detected, including six species of conservation interest. Of the 39 samples, 29 corresponded to corroborations of field identifications. Seven corresponded to unidentified samples and three to corrected misidentifications, adding up to 28% of the identified samples. Sex was successfully identified for 58 of the 63 individuals. Twenty were corroborations, 34 were previously unidentified, and four were corrections. Applying this method improves the stranding database of Chile and provides new data for future management and conservation tasks.LA/P/0101/2020MDPISapientiaKraft, SebastianRodríguez, FranciscaOlavarría, CarlosPoulin, EliePérez-Álvarez, María José2023-07-13T14:58:36Z20232023-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/19831eng10.3390/biology120507482079-7737info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:32:22Zoai:sapientia.ualg.pt:10400.1/19831Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:09:22.832233Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Genetic analysis as a tool to improve the monitoring of stranded cetaceans in Chile
title Genetic analysis as a tool to improve the monitoring of stranded cetaceans in Chile
spellingShingle Genetic analysis as a tool to improve the monitoring of stranded cetaceans in Chile
Kraft, Sebastian
Stranding record
Government institution
Species and sex identification
Multidisciplinary approach
Conservation
Management
title_short Genetic analysis as a tool to improve the monitoring of stranded cetaceans in Chile
title_full Genetic analysis as a tool to improve the monitoring of stranded cetaceans in Chile
title_fullStr Genetic analysis as a tool to improve the monitoring of stranded cetaceans in Chile
title_full_unstemmed Genetic analysis as a tool to improve the monitoring of stranded cetaceans in Chile
title_sort Genetic analysis as a tool to improve the monitoring of stranded cetaceans in Chile
author Kraft, Sebastian
author_facet Kraft, Sebastian
Rodríguez, Francisca
Olavarría, Carlos
Poulin, Elie
Pérez-Álvarez, María José
author_role author
author2 Rodríguez, Francisca
Olavarría, Carlos
Poulin, Elie
Pérez-Álvarez, María José
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Kraft, Sebastian
Rodríguez, Francisca
Olavarría, Carlos
Poulin, Elie
Pérez-Álvarez, María José
dc.subject.por.fl_str_mv Stranding record
Government institution
Species and sex identification
Multidisciplinary approach
Conservation
Management
topic Stranding record
Government institution
Species and sex identification
Multidisciplinary approach
Conservation
Management
description Cetacean strandings are regularly recorded along the coast of Chile. However, crucial information such as species and sex of the individuals involved in these events can often be difficult to assess. In this context, the use of molecular tools as a complementary method can improve a stranding database, particularly by correcting misidentifications and providing new data for unidentified samples. This new information is especially important in the case of species that are poorly known or of high conservation interest. In this study, we evaluate how molecular tools can support and complement the field work records of strandings in Chile by identifying, corroborating, or correcting the identification of the species and sex of the recorded individuals. We obtained samples through a collaboration with the government agency that is in charge of assisting with cetacean strandings and collected the relevant information. Multidisciplinary approaches like this, and inter-institutional collaborations, can improve the study of cetacean strandings and the decisions in management and conservation policies around them. Cetacean strandings are a valuable source of information for several studies from species richness to conservation and management. During the examination of strandings, taxonomic and sex identification might be hindered for several reasons. Molecular techniques are valuable tools to obtain that missing information. This study evaluates how gene fragment amplification protocols can support the records of strandings done in the field in Chile by identifying, corroborating, or correcting the identification of the species and sex of the recorded individuals. Through a collaboration between a scientific laboratory and government institution in Chile, 63 samples were analyzed. Thirty-nine samples were successfully identified to the species level. In total, 17 species of six families were detected, including six species of conservation interest. Of the 39 samples, 29 corresponded to corroborations of field identifications. Seven corresponded to unidentified samples and three to corrected misidentifications, adding up to 28% of the identified samples. Sex was successfully identified for 58 of the 63 individuals. Twenty were corroborations, 34 were previously unidentified, and four were corrections. Applying this method improves the stranding database of Chile and provides new data for future management and conservation tasks.
publishDate 2023
dc.date.none.fl_str_mv 2023-07-13T14:58:36Z
2023
2023-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/19831
url http://hdl.handle.net/10400.1/19831
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.3390/biology12050748
2079-7737
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799133341429006336