A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study
Autor(a) principal: | |
---|---|
Data de Publicação: | 2016 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10316/108733 https://doi.org/10.18632/oncotarget.10639 |
Resumo: | The identification of new biomarkers to differentiate between indolent and aggressive prostate tumors is an important unmet need. We examined the role of THOR (TERT Hypermethylated Oncological Region) as a diagnostic and prognostic biomarker in prostate cancer (PCa).We analyzed THOR in common cancers using genome-wide methylation arrays. Methylation status of the whole TERT gene in benign and malignant prostate samples was determined by MeDIP-Seq. The prognostic role of THOR in PCa was assessed by pyrosequencing on discovery and validation cohorts from patients who underwent radical prostatectomy with long-term follow-up data.Most cancers (n = 3056) including PCa (n = 300) exhibited hypermethylation of THOR. THOR was the only region within the TERT gene that is differentially methylated between normal and malignant prostate tissue (p < 0.0001). Also, THOR was significantly hypermethylated in PCa when compared to paired benign tissues (n = 164, p < 0.0001). THOR hypermethylation correlated with Gleason scores and was associated with tumor invasiveness (p = 0.0147). Five years biochemical progression free survival (BPFS) for PCa patients in the discovery cohort was 87% (95% CI 73-100) and 65% (95% CI 52-78) for THOR non-hypermethylated and hypermethylated cancers respectively (p = 0.01). Similar differences in BPFS were noted in the validation cohort (p = 0.03). Importantly, THOR was able to predict outcome in the challenging (Gleason 6 and 7 (3 + 4)) PCa (p = 0.007). For this group, THOR was an independent risk factor for BPFS with a hazard-ratio of 3.685 (p = 0.0247). Finally, THOR hypermethylation more than doubled the risk of recurrence across all PSA levels (OR 2.5, p = 0.02). |
id |
RCAP_f9930ee579588e389e84a25164eda9da |
---|---|
oai_identifier_str |
oai:estudogeral.uc.pt:10316/108733 |
network_acronym_str |
RCAP |
network_name_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository_id_str |
7160 |
spelling |
A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort studyTERTprostate cancerbiomarkerdiagnosticGleason scoreAgedBiomarkers, TumorCell DifferentiationDNA MethylationEpigenesis, GeneticFollow-Up StudiesGene Expression Regulation, NeoplasticHumansMaleMiddle AgedNeoplasm Recurrence, LocalPrognosisProportional Hazards ModelsProstatectomyProstatic NeoplasmsRetrospective StudiesTelomeraseThe identification of new biomarkers to differentiate between indolent and aggressive prostate tumors is an important unmet need. We examined the role of THOR (TERT Hypermethylated Oncological Region) as a diagnostic and prognostic biomarker in prostate cancer (PCa).We analyzed THOR in common cancers using genome-wide methylation arrays. Methylation status of the whole TERT gene in benign and malignant prostate samples was determined by MeDIP-Seq. The prognostic role of THOR in PCa was assessed by pyrosequencing on discovery and validation cohorts from patients who underwent radical prostatectomy with long-term follow-up data.Most cancers (n = 3056) including PCa (n = 300) exhibited hypermethylation of THOR. THOR was the only region within the TERT gene that is differentially methylated between normal and malignant prostate tissue (p < 0.0001). Also, THOR was significantly hypermethylated in PCa when compared to paired benign tissues (n = 164, p < 0.0001). THOR hypermethylation correlated with Gleason scores and was associated with tumor invasiveness (p = 0.0147). Five years biochemical progression free survival (BPFS) for PCa patients in the discovery cohort was 87% (95% CI 73-100) and 65% (95% CI 52-78) for THOR non-hypermethylated and hypermethylated cancers respectively (p = 0.01). Similar differences in BPFS were noted in the validation cohort (p = 0.03). Importantly, THOR was able to predict outcome in the challenging (Gleason 6 and 7 (3 + 4)) PCa (p = 0.007). For this group, THOR was an independent risk factor for BPFS with a hazard-ratio of 3.685 (p = 0.0247). Finally, THOR hypermethylation more than doubled the risk of recurrence across all PSA levels (OR 2.5, p = 0.02).Impact Journals2016-09-06info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/108733http://hdl.handle.net/10316/108733https://doi.org/10.18632/oncotarget.10639eng1949-2553Castelo Branco, PedroLeão, RicardoLipman, TatianaCampbell, BrittanyLee, DonghyunPrice, AryehZhang, CindyHeidari, AbolfazlStephens, DerekBoerno, StefanCoelho, HugoGomes, AnaDomingos, CeliaApolonio, Joana DSchäfer, GeorgBristow, Robert GSchweiger, Michal RHamilton, RobertZlotta, AlexandreFigueiredo, ArnaldoKlocker, HelmutSültmann, HolgerTabori, Uriinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-09-11T10:31:43Zoai:estudogeral.uc.pt:10316/108733Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:25:00.212158Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study |
title |
A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study |
spellingShingle |
A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study Castelo Branco, Pedro TERT prostate cancer biomarker diagnostic Gleason score Aged Biomarkers, Tumor Cell Differentiation DNA Methylation Epigenesis, Genetic Follow-Up Studies Gene Expression Regulation, Neoplastic Humans Male Middle Aged Neoplasm Recurrence, Local Prognosis Proportional Hazards Models Prostatectomy Prostatic Neoplasms Retrospective Studies Telomerase |
title_short |
A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study |
title_full |
A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study |
title_fullStr |
A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study |
title_full_unstemmed |
A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study |
title_sort |
A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study |
author |
Castelo Branco, Pedro |
author_facet |
Castelo Branco, Pedro Leão, Ricardo Lipman, Tatiana Campbell, Brittany Lee, Donghyun Price, Aryeh Zhang, Cindy Heidari, Abolfazl Stephens, Derek Boerno, Stefan Coelho, Hugo Gomes, Ana Domingos, Celia Apolonio, Joana D Schäfer, Georg Bristow, Robert G Schweiger, Michal R Hamilton, Robert Zlotta, Alexandre Figueiredo, Arnaldo Klocker, Helmut Sültmann, Holger Tabori, Uri |
author_role |
author |
author2 |
Leão, Ricardo Lipman, Tatiana Campbell, Brittany Lee, Donghyun Price, Aryeh Zhang, Cindy Heidari, Abolfazl Stephens, Derek Boerno, Stefan Coelho, Hugo Gomes, Ana Domingos, Celia Apolonio, Joana D Schäfer, Georg Bristow, Robert G Schweiger, Michal R Hamilton, Robert Zlotta, Alexandre Figueiredo, Arnaldo Klocker, Helmut Sültmann, Holger Tabori, Uri |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Castelo Branco, Pedro Leão, Ricardo Lipman, Tatiana Campbell, Brittany Lee, Donghyun Price, Aryeh Zhang, Cindy Heidari, Abolfazl Stephens, Derek Boerno, Stefan Coelho, Hugo Gomes, Ana Domingos, Celia Apolonio, Joana D Schäfer, Georg Bristow, Robert G Schweiger, Michal R Hamilton, Robert Zlotta, Alexandre Figueiredo, Arnaldo Klocker, Helmut Sültmann, Holger Tabori, Uri |
dc.subject.por.fl_str_mv |
TERT prostate cancer biomarker diagnostic Gleason score Aged Biomarkers, Tumor Cell Differentiation DNA Methylation Epigenesis, Genetic Follow-Up Studies Gene Expression Regulation, Neoplastic Humans Male Middle Aged Neoplasm Recurrence, Local Prognosis Proportional Hazards Models Prostatectomy Prostatic Neoplasms Retrospective Studies Telomerase |
topic |
TERT prostate cancer biomarker diagnostic Gleason score Aged Biomarkers, Tumor Cell Differentiation DNA Methylation Epigenesis, Genetic Follow-Up Studies Gene Expression Regulation, Neoplastic Humans Male Middle Aged Neoplasm Recurrence, Local Prognosis Proportional Hazards Models Prostatectomy Prostatic Neoplasms Retrospective Studies Telomerase |
description |
The identification of new biomarkers to differentiate between indolent and aggressive prostate tumors is an important unmet need. We examined the role of THOR (TERT Hypermethylated Oncological Region) as a diagnostic and prognostic biomarker in prostate cancer (PCa).We analyzed THOR in common cancers using genome-wide methylation arrays. Methylation status of the whole TERT gene in benign and malignant prostate samples was determined by MeDIP-Seq. The prognostic role of THOR in PCa was assessed by pyrosequencing on discovery and validation cohorts from patients who underwent radical prostatectomy with long-term follow-up data.Most cancers (n = 3056) including PCa (n = 300) exhibited hypermethylation of THOR. THOR was the only region within the TERT gene that is differentially methylated between normal and malignant prostate tissue (p < 0.0001). Also, THOR was significantly hypermethylated in PCa when compared to paired benign tissues (n = 164, p < 0.0001). THOR hypermethylation correlated with Gleason scores and was associated with tumor invasiveness (p = 0.0147). Five years biochemical progression free survival (BPFS) for PCa patients in the discovery cohort was 87% (95% CI 73-100) and 65% (95% CI 52-78) for THOR non-hypermethylated and hypermethylated cancers respectively (p = 0.01). Similar differences in BPFS were noted in the validation cohort (p = 0.03). Importantly, THOR was able to predict outcome in the challenging (Gleason 6 and 7 (3 + 4)) PCa (p = 0.007). For this group, THOR was an independent risk factor for BPFS with a hazard-ratio of 3.685 (p = 0.0247). Finally, THOR hypermethylation more than doubled the risk of recurrence across all PSA levels (OR 2.5, p = 0.02). |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-09-06 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10316/108733 http://hdl.handle.net/10316/108733 https://doi.org/10.18632/oncotarget.10639 |
url |
http://hdl.handle.net/10316/108733 https://doi.org/10.18632/oncotarget.10639 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
1949-2553 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Impact Journals |
publisher.none.fl_str_mv |
Impact Journals |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
|
_version_ |
1817551256320737280 |