HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019

Detalhes bibliográficos
Autor(a) principal: Pingarilho, M
Data de Publicação: 2022
Outros Autores: Pimentel, V, Miranda, M, Silva, AR, Diniz, A, Ascenção, B, Piñeiro, C, Koch, C, Rodrigues, C, Caldas, C, Morais, C, Faria, D, Gomes da Silva, E, Teófilo, E, Monteiro, F, Roxo, F, Maltez, F, Rodrigues, F, Gaião, G, Ramos, H, Costa, I, Germano, I, Simões, J, Oliveira, J, Ferreira, J, Poças, J, Saraiva da Cunha, J, Soares, J, Henriques, J, Mansinho, K, Pedro, L, Aleixo, MJ, Gonçalves, MaJ, Manata, MJ, Mouro, M, Serrado, M, Caixeiro, M, Marques, N, Costa, O, Pacheco, P, Proença, P, Rodrigues, P, Pinho, R, Tavares, R, Correia de Abreu, R, Côrte-Real, R, Serrão, R, Sarmento e Castro, R, Nunes, S, Faria, T, Baptista, T, Martins, MR, Gomes, P, Mendão, L, Simões, D, Abecasis, A
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.17/4463
Resumo: Objective: To describe and analyze transmitted drug resistance (TDR) between 2014 and 2019 in newly infected patients with HIV-1 in Portugal and to characterize its transmission networks. Methods: Clinical, socioepidemiological, and risk behavior data were collected from 820 newly diagnosed patients in Portugal between September 2014 and December 2019. The sequences obtained from drug resistance testing were used for subtyping, TDR determination, and transmission cluster (TC) analyses. Results: In Portugal, the overall prevalence of TDR between 2014 and 2019 was 11.0%. TDR presented a decreasing trend from 16.7% in 2014 to 9.2% in 2016 (p for-trend = 0.114). Multivariate analysis indicated that TDR was significantly associated with transmission route (MSM presented a lower probability of presenting TDR when compared to heterosexual contact) and with subtype (subtype C presented significantly more TDR when compared to subtype B). TC analysis corroborated that the heterosexual risk group presented a higher proportion of TDR in TCs when compared to MSMs. Among subtype A1, TDR reached 16.6% in heterosexuals, followed by 14.2% in patients infected with subtype B and 9.4% in patients infected with subtype G. Conclusion: Our molecular epidemiology approach indicates that the HIV-1 epidemic in Portugal is changing among risk group populations, with heterosexuals showing increasing levels of HIV-1 transmission and TDR. Prevention measures for this subpopulation should be reinforced.
id RCAP_f9e4c253780bb01f6e27687b4c2b2688
oai_identifier_str oai:repositorio.chlc.min-saude.pt:10400.17/4463
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019HSJ MEDHSAC MEDHCC INFCHLC PAT CLINHIV-1PortugalTDRNewly Infected PatientsTransmission ClustersObjective: To describe and analyze transmitted drug resistance (TDR) between 2014 and 2019 in newly infected patients with HIV-1 in Portugal and to characterize its transmission networks. Methods: Clinical, socioepidemiological, and risk behavior data were collected from 820 newly diagnosed patients in Portugal between September 2014 and December 2019. The sequences obtained from drug resistance testing were used for subtyping, TDR determination, and transmission cluster (TC) analyses. Results: In Portugal, the overall prevalence of TDR between 2014 and 2019 was 11.0%. TDR presented a decreasing trend from 16.7% in 2014 to 9.2% in 2016 (p for-trend = 0.114). Multivariate analysis indicated that TDR was significantly associated with transmission route (MSM presented a lower probability of presenting TDR when compared to heterosexual contact) and with subtype (subtype C presented significantly more TDR when compared to subtype B). TC analysis corroborated that the heterosexual risk group presented a higher proportion of TDR in TCs when compared to MSMs. Among subtype A1, TDR reached 16.6% in heterosexuals, followed by 14.2% in patients infected with subtype B and 9.4% in patients infected with subtype G. Conclusion: Our molecular epidemiology approach indicates that the HIV-1 epidemic in Portugal is changing among risk group populations, with heterosexuals showing increasing levels of HIV-1 transmission and TDR. Prevention measures for this subpopulation should be reinforced.Frontiers Media SARepositório do Centro Hospitalar Universitário de Lisboa Central, EPEPingarilho, MPimentel, VMiranda, MSilva, ARDiniz, AAscenção, BPiñeiro, CKoch, CRodrigues, CCaldas, CMorais, CFaria, DGomes da Silva, ETeófilo, EMonteiro, FRoxo, FMaltez, FRodrigues, FGaião, GRamos, HCosta, IGermano, ISimões, JOliveira, JFerreira, JPoças, JSaraiva da Cunha, JSoares, JHenriques, JMansinho, KPedro, LAleixo, MJGonçalves, MaJManata, MJMouro, MSerrado, MCaixeiro, MMarques, NCosta, OPacheco, PProença, PRodrigues, PPinho, RTavares, RCorreia de Abreu, RCôrte-Real, RSerrão, RSarmento e Castro, RNunes, SFaria, TBaptista, TMartins, MRGomes, PMendão, LSimões, DAbecasis, A2023-03-17T16:09:51Z2022-042022-04-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.17/4463engFront Microbiol . 2022 Apr 25;13:823208.10.3389/fmicb.2022.823208info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-03-19T05:33:36Zoai:repositorio.chlc.min-saude.pt:10400.17/4463Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T17:42:55.724616Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019
title HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019
spellingShingle HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019
Pingarilho, M
HSJ MED
HSAC MED
HCC INF
CHLC PAT CLIN
HIV-1
Portugal
TDR
Newly Infected Patients
Transmission Clusters
title_short HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019
title_full HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019
title_fullStr HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019
title_full_unstemmed HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019
title_sort HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019
author Pingarilho, M
author_facet Pingarilho, M
Pimentel, V
Miranda, M
Silva, AR
Diniz, A
Ascenção, B
Piñeiro, C
Koch, C
Rodrigues, C
Caldas, C
Morais, C
Faria, D
Gomes da Silva, E
Teófilo, E
Monteiro, F
Roxo, F
Maltez, F
Rodrigues, F
Gaião, G
Ramos, H
Costa, I
Germano, I
Simões, J
Oliveira, J
Ferreira, J
Poças, J
Saraiva da Cunha, J
Soares, J
Henriques, J
Mansinho, K
Pedro, L
Aleixo, MJ
Gonçalves, MaJ
Manata, MJ
Mouro, M
Serrado, M
Caixeiro, M
Marques, N
Costa, O
Pacheco, P
Proença, P
Rodrigues, P
Pinho, R
Tavares, R
Correia de Abreu, R
Côrte-Real, R
Serrão, R
Sarmento e Castro, R
Nunes, S
Faria, T
Baptista, T
Martins, MR
Gomes, P
Mendão, L
Simões, D
Abecasis, A
author_role author
author2 Pimentel, V
Miranda, M
Silva, AR
Diniz, A
Ascenção, B
Piñeiro, C
Koch, C
Rodrigues, C
Caldas, C
Morais, C
Faria, D
Gomes da Silva, E
Teófilo, E
Monteiro, F
Roxo, F
Maltez, F
Rodrigues, F
Gaião, G
Ramos, H
Costa, I
Germano, I
Simões, J
Oliveira, J
Ferreira, J
Poças, J
Saraiva da Cunha, J
Soares, J
Henriques, J
Mansinho, K
Pedro, L
Aleixo, MJ
Gonçalves, MaJ
Manata, MJ
Mouro, M
Serrado, M
Caixeiro, M
Marques, N
Costa, O
Pacheco, P
Proença, P
Rodrigues, P
Pinho, R
Tavares, R
Correia de Abreu, R
Côrte-Real, R
Serrão, R
Sarmento e Castro, R
Nunes, S
Faria, T
Baptista, T
Martins, MR
Gomes, P
Mendão, L
Simões, D
Abecasis, A
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório do Centro Hospitalar Universitário de Lisboa Central, EPE
dc.contributor.author.fl_str_mv Pingarilho, M
Pimentel, V
Miranda, M
Silva, AR
Diniz, A
Ascenção, B
Piñeiro, C
Koch, C
Rodrigues, C
Caldas, C
Morais, C
Faria, D
Gomes da Silva, E
Teófilo, E
Monteiro, F
Roxo, F
Maltez, F
Rodrigues, F
Gaião, G
Ramos, H
Costa, I
Germano, I
Simões, J
Oliveira, J
Ferreira, J
Poças, J
Saraiva da Cunha, J
Soares, J
Henriques, J
Mansinho, K
Pedro, L
Aleixo, MJ
Gonçalves, MaJ
Manata, MJ
Mouro, M
Serrado, M
Caixeiro, M
Marques, N
Costa, O
Pacheco, P
Proença, P
Rodrigues, P
Pinho, R
Tavares, R
Correia de Abreu, R
Côrte-Real, R
Serrão, R
Sarmento e Castro, R
Nunes, S
Faria, T
Baptista, T
Martins, MR
Gomes, P
Mendão, L
Simões, D
Abecasis, A
dc.subject.por.fl_str_mv HSJ MED
HSAC MED
HCC INF
CHLC PAT CLIN
HIV-1
Portugal
TDR
Newly Infected Patients
Transmission Clusters
topic HSJ MED
HSAC MED
HCC INF
CHLC PAT CLIN
HIV-1
Portugal
TDR
Newly Infected Patients
Transmission Clusters
description Objective: To describe and analyze transmitted drug resistance (TDR) between 2014 and 2019 in newly infected patients with HIV-1 in Portugal and to characterize its transmission networks. Methods: Clinical, socioepidemiological, and risk behavior data were collected from 820 newly diagnosed patients in Portugal between September 2014 and December 2019. The sequences obtained from drug resistance testing were used for subtyping, TDR determination, and transmission cluster (TC) analyses. Results: In Portugal, the overall prevalence of TDR between 2014 and 2019 was 11.0%. TDR presented a decreasing trend from 16.7% in 2014 to 9.2% in 2016 (p for-trend = 0.114). Multivariate analysis indicated that TDR was significantly associated with transmission route (MSM presented a lower probability of presenting TDR when compared to heterosexual contact) and with subtype (subtype C presented significantly more TDR when compared to subtype B). TC analysis corroborated that the heterosexual risk group presented a higher proportion of TDR in TCs when compared to MSMs. Among subtype A1, TDR reached 16.6% in heterosexuals, followed by 14.2% in patients infected with subtype B and 9.4% in patients infected with subtype G. Conclusion: Our molecular epidemiology approach indicates that the HIV-1 epidemic in Portugal is changing among risk group populations, with heterosexuals showing increasing levels of HIV-1 transmission and TDR. Prevention measures for this subpopulation should be reinforced.
publishDate 2022
dc.date.none.fl_str_mv 2022-04
2022-04-01T00:00:00Z
2023-03-17T16:09:51Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.17/4463
url http://hdl.handle.net/10400.17/4463
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Front Microbiol . 2022 Apr 25;13:823208.
10.3389/fmicb.2022.823208
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Frontiers Media SA
publisher.none.fl_str_mv Frontiers Media SA
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799131515752284160