HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.17/4463 |
Resumo: | Objective: To describe and analyze transmitted drug resistance (TDR) between 2014 and 2019 in newly infected patients with HIV-1 in Portugal and to characterize its transmission networks. Methods: Clinical, socioepidemiological, and risk behavior data were collected from 820 newly diagnosed patients in Portugal between September 2014 and December 2019. The sequences obtained from drug resistance testing were used for subtyping, TDR determination, and transmission cluster (TC) analyses. Results: In Portugal, the overall prevalence of TDR between 2014 and 2019 was 11.0%. TDR presented a decreasing trend from 16.7% in 2014 to 9.2% in 2016 (p for-trend = 0.114). Multivariate analysis indicated that TDR was significantly associated with transmission route (MSM presented a lower probability of presenting TDR when compared to heterosexual contact) and with subtype (subtype C presented significantly more TDR when compared to subtype B). TC analysis corroborated that the heterosexual risk group presented a higher proportion of TDR in TCs when compared to MSMs. Among subtype A1, TDR reached 16.6% in heterosexuals, followed by 14.2% in patients infected with subtype B and 9.4% in patients infected with subtype G. Conclusion: Our molecular epidemiology approach indicates that the HIV-1 epidemic in Portugal is changing among risk group populations, with heterosexuals showing increasing levels of HIV-1 transmission and TDR. Prevention measures for this subpopulation should be reinforced. |
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HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019HSJ MEDHSAC MEDHCC INFCHLC PAT CLINHIV-1PortugalTDRNewly Infected PatientsTransmission ClustersObjective: To describe and analyze transmitted drug resistance (TDR) between 2014 and 2019 in newly infected patients with HIV-1 in Portugal and to characterize its transmission networks. Methods: Clinical, socioepidemiological, and risk behavior data were collected from 820 newly diagnosed patients in Portugal between September 2014 and December 2019. The sequences obtained from drug resistance testing were used for subtyping, TDR determination, and transmission cluster (TC) analyses. Results: In Portugal, the overall prevalence of TDR between 2014 and 2019 was 11.0%. TDR presented a decreasing trend from 16.7% in 2014 to 9.2% in 2016 (p for-trend = 0.114). Multivariate analysis indicated that TDR was significantly associated with transmission route (MSM presented a lower probability of presenting TDR when compared to heterosexual contact) and with subtype (subtype C presented significantly more TDR when compared to subtype B). TC analysis corroborated that the heterosexual risk group presented a higher proportion of TDR in TCs when compared to MSMs. Among subtype A1, TDR reached 16.6% in heterosexuals, followed by 14.2% in patients infected with subtype B and 9.4% in patients infected with subtype G. Conclusion: Our molecular epidemiology approach indicates that the HIV-1 epidemic in Portugal is changing among risk group populations, with heterosexuals showing increasing levels of HIV-1 transmission and TDR. Prevention measures for this subpopulation should be reinforced.Frontiers Media SARepositório do Centro Hospitalar Universitário de Lisboa Central, EPEPingarilho, MPimentel, VMiranda, MSilva, ARDiniz, AAscenção, BPiñeiro, CKoch, CRodrigues, CCaldas, CMorais, CFaria, DGomes da Silva, ETeófilo, EMonteiro, FRoxo, FMaltez, FRodrigues, FGaião, GRamos, HCosta, IGermano, ISimões, JOliveira, JFerreira, JPoças, JSaraiva da Cunha, JSoares, JHenriques, JMansinho, KPedro, LAleixo, MJGonçalves, MaJManata, MJMouro, MSerrado, MCaixeiro, MMarques, NCosta, OPacheco, PProença, PRodrigues, PPinho, RTavares, RCorreia de Abreu, RCôrte-Real, RSerrão, RSarmento e Castro, RNunes, SFaria, TBaptista, TMartins, MRGomes, PMendão, LSimões, DAbecasis, A2023-03-17T16:09:51Z2022-042022-04-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.17/4463engFront Microbiol . 2022 Apr 25;13:823208.10.3389/fmicb.2022.823208info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-03-19T05:33:36Zoai:repositorio.chlc.min-saude.pt:10400.17/4463Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T17:42:55.724616Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019 |
title |
HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019 |
spellingShingle |
HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019 Pingarilho, M HSJ MED HSAC MED HCC INF CHLC PAT CLIN HIV-1 Portugal TDR Newly Infected Patients Transmission Clusters |
title_short |
HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019 |
title_full |
HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019 |
title_fullStr |
HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019 |
title_full_unstemmed |
HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019 |
title_sort |
HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019 |
author |
Pingarilho, M |
author_facet |
Pingarilho, M Pimentel, V Miranda, M Silva, AR Diniz, A Ascenção, B Piñeiro, C Koch, C Rodrigues, C Caldas, C Morais, C Faria, D Gomes da Silva, E Teófilo, E Monteiro, F Roxo, F Maltez, F Rodrigues, F Gaião, G Ramos, H Costa, I Germano, I Simões, J Oliveira, J Ferreira, J Poças, J Saraiva da Cunha, J Soares, J Henriques, J Mansinho, K Pedro, L Aleixo, MJ Gonçalves, MaJ Manata, MJ Mouro, M Serrado, M Caixeiro, M Marques, N Costa, O Pacheco, P Proença, P Rodrigues, P Pinho, R Tavares, R Correia de Abreu, R Côrte-Real, R Serrão, R Sarmento e Castro, R Nunes, S Faria, T Baptista, T Martins, MR Gomes, P Mendão, L Simões, D Abecasis, A |
author_role |
author |
author2 |
Pimentel, V Miranda, M Silva, AR Diniz, A Ascenção, B Piñeiro, C Koch, C Rodrigues, C Caldas, C Morais, C Faria, D Gomes da Silva, E Teófilo, E Monteiro, F Roxo, F Maltez, F Rodrigues, F Gaião, G Ramos, H Costa, I Germano, I Simões, J Oliveira, J Ferreira, J Poças, J Saraiva da Cunha, J Soares, J Henriques, J Mansinho, K Pedro, L Aleixo, MJ Gonçalves, MaJ Manata, MJ Mouro, M Serrado, M Caixeiro, M Marques, N Costa, O Pacheco, P Proença, P Rodrigues, P Pinho, R Tavares, R Correia de Abreu, R Côrte-Real, R Serrão, R Sarmento e Castro, R Nunes, S Faria, T Baptista, T Martins, MR Gomes, P Mendão, L Simões, D Abecasis, A |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório do Centro Hospitalar Universitário de Lisboa Central, EPE |
dc.contributor.author.fl_str_mv |
Pingarilho, M Pimentel, V Miranda, M Silva, AR Diniz, A Ascenção, B Piñeiro, C Koch, C Rodrigues, C Caldas, C Morais, C Faria, D Gomes da Silva, E Teófilo, E Monteiro, F Roxo, F Maltez, F Rodrigues, F Gaião, G Ramos, H Costa, I Germano, I Simões, J Oliveira, J Ferreira, J Poças, J Saraiva da Cunha, J Soares, J Henriques, J Mansinho, K Pedro, L Aleixo, MJ Gonçalves, MaJ Manata, MJ Mouro, M Serrado, M Caixeiro, M Marques, N Costa, O Pacheco, P Proença, P Rodrigues, P Pinho, R Tavares, R Correia de Abreu, R Côrte-Real, R Serrão, R Sarmento e Castro, R Nunes, S Faria, T Baptista, T Martins, MR Gomes, P Mendão, L Simões, D Abecasis, A |
dc.subject.por.fl_str_mv |
HSJ MED HSAC MED HCC INF CHLC PAT CLIN HIV-1 Portugal TDR Newly Infected Patients Transmission Clusters |
topic |
HSJ MED HSAC MED HCC INF CHLC PAT CLIN HIV-1 Portugal TDR Newly Infected Patients Transmission Clusters |
description |
Objective: To describe and analyze transmitted drug resistance (TDR) between 2014 and 2019 in newly infected patients with HIV-1 in Portugal and to characterize its transmission networks. Methods: Clinical, socioepidemiological, and risk behavior data were collected from 820 newly diagnosed patients in Portugal between September 2014 and December 2019. The sequences obtained from drug resistance testing were used for subtyping, TDR determination, and transmission cluster (TC) analyses. Results: In Portugal, the overall prevalence of TDR between 2014 and 2019 was 11.0%. TDR presented a decreasing trend from 16.7% in 2014 to 9.2% in 2016 (p for-trend = 0.114). Multivariate analysis indicated that TDR was significantly associated with transmission route (MSM presented a lower probability of presenting TDR when compared to heterosexual contact) and with subtype (subtype C presented significantly more TDR when compared to subtype B). TC analysis corroborated that the heterosexual risk group presented a higher proportion of TDR in TCs when compared to MSMs. Among subtype A1, TDR reached 16.6% in heterosexuals, followed by 14.2% in patients infected with subtype B and 9.4% in patients infected with subtype G. Conclusion: Our molecular epidemiology approach indicates that the HIV-1 epidemic in Portugal is changing among risk group populations, with heterosexuals showing increasing levels of HIV-1 transmission and TDR. Prevention measures for this subpopulation should be reinforced. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-04 2022-04-01T00:00:00Z 2023-03-17T16:09:51Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.17/4463 |
url |
http://hdl.handle.net/10400.17/4463 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Front Microbiol . 2022 Apr 25;13:823208. 10.3389/fmicb.2022.823208 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Frontiers Media SA |
publisher.none.fl_str_mv |
Frontiers Media SA |
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reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1799131515752284160 |