A fine-tuned global distribution dataset of marine forests
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.1/13882 |
Resumo: | Species distribution records are a prerequisite to follow climate-induced range shifts across space and time. However, synthesizing information from various sources such as peer-reviewed literature, herbaria, digital repositories and citizen science initiatives is not only costly and time consuming, but also challenging, as data may contain thematic and taxonomic errors and generally lack standardized formats. We address this gap for important marine ecosystem-structuring species of large brown algae and seagrasses. We gathered distribution records from various sources and provide a fine-tuned dataset with ~2.8 million dereplicated records, taxonomically standardized for 682 species, and considering important physiological and biogeographical traits. Specifically, a flagging system was implemented to signal potentially incorrect records reported on land, in regions with limiting light conditions for photosynthesis, and outside the known distribution of species, as inferred from the most recent published literature. We document the procedure and provide a dataset in tabular format based on Darwin Core Standard (DwC), alongside with a set of functions in R language for data management and visualization. |
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A fine-tuned global distribution dataset of marine forestsSpecies-range shiftsPlatformClimate-changeCoastalHabitatDiversitySpecies distribution records are a prerequisite to follow climate-induced range shifts across space and time. However, synthesizing information from various sources such as peer-reviewed literature, herbaria, digital repositories and citizen science initiatives is not only costly and time consuming, but also challenging, as data may contain thematic and taxonomic errors and generally lack standardized formats. We address this gap for important marine ecosystem-structuring species of large brown algae and seagrasses. We gathered distribution records from various sources and provide a fine-tuned dataset with ~2.8 million dereplicated records, taxonomically standardized for 682 species, and considering important physiological and biogeographical traits. Specifically, a flagging system was implemented to signal potentially incorrect records reported on land, in regions with limiting light conditions for photosynthesis, and outside the known distribution of species, as inferred from the most recent published literature. We document the procedure and provide a dataset in tabular format based on Darwin Core Standard (DwC), alongside with a set of functions in R language for data management and visualization.FCT: (SFRH/BPD/111003/2015) / (SFRH/BSAB/150485/2019) / (SFRH/BD/144878/2019)(PTDC/MAREST/6053/2014) / MARFOR (BIODIVERSA/004/2015) / UIDB/04326/2020Nature ResearchSapientiaAssis, J.Fragkopoulou, ElizaFrade, DuarteNeiva, J.Oliveira, AndréAbecasis, DavidFaugeron, SylvainSerrao, Ester2020-05-13T09:40:07Z20202020-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/13882eng2052-446310.1038/s41597-020-0459-xinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:26:05Zoai:sapientia.ualg.pt:10400.1/13882Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:04:59.623656Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
A fine-tuned global distribution dataset of marine forests |
title |
A fine-tuned global distribution dataset of marine forests |
spellingShingle |
A fine-tuned global distribution dataset of marine forests Assis, J. Species-range shifts Platform Climate-change Coastal Habitat Diversity |
title_short |
A fine-tuned global distribution dataset of marine forests |
title_full |
A fine-tuned global distribution dataset of marine forests |
title_fullStr |
A fine-tuned global distribution dataset of marine forests |
title_full_unstemmed |
A fine-tuned global distribution dataset of marine forests |
title_sort |
A fine-tuned global distribution dataset of marine forests |
author |
Assis, J. |
author_facet |
Assis, J. Fragkopoulou, Eliza Frade, Duarte Neiva, J. Oliveira, André Abecasis, David Faugeron, Sylvain Serrao, Ester |
author_role |
author |
author2 |
Fragkopoulou, Eliza Frade, Duarte Neiva, J. Oliveira, André Abecasis, David Faugeron, Sylvain Serrao, Ester |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Sapientia |
dc.contributor.author.fl_str_mv |
Assis, J. Fragkopoulou, Eliza Frade, Duarte Neiva, J. Oliveira, André Abecasis, David Faugeron, Sylvain Serrao, Ester |
dc.subject.por.fl_str_mv |
Species-range shifts Platform Climate-change Coastal Habitat Diversity |
topic |
Species-range shifts Platform Climate-change Coastal Habitat Diversity |
description |
Species distribution records are a prerequisite to follow climate-induced range shifts across space and time. However, synthesizing information from various sources such as peer-reviewed literature, herbaria, digital repositories and citizen science initiatives is not only costly and time consuming, but also challenging, as data may contain thematic and taxonomic errors and generally lack standardized formats. We address this gap for important marine ecosystem-structuring species of large brown algae and seagrasses. We gathered distribution records from various sources and provide a fine-tuned dataset with ~2.8 million dereplicated records, taxonomically standardized for 682 species, and considering important physiological and biogeographical traits. Specifically, a flagging system was implemented to signal potentially incorrect records reported on land, in regions with limiting light conditions for photosynthesis, and outside the known distribution of species, as inferred from the most recent published literature. We document the procedure and provide a dataset in tabular format based on Darwin Core Standard (DwC), alongside with a set of functions in R language for data management and visualization. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-05-13T09:40:07Z 2020 2020-01-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.1/13882 |
url |
http://hdl.handle.net/10400.1/13882 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
2052-4463 10.1038/s41597-020-0459-x |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Nature Research |
publisher.none.fl_str_mv |
Nature Research |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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