Smoothing membrane protein structure determination by initial upstream stage improvements

Detalhes bibliográficos
Autor(a) principal: Pedro, Augusto Quaresma
Data de Publicação: 2019
Outros Autores: Queiroz, João António, Passarinha, Luís António
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/27029
Resumo: Membrane proteins (MP) constitute 20-30% of all proteins encoded by the genome of various organisms and perform a wide range of essential biological functions. However, despite they represent the largest class of protein drug targets, a relatively small number high-resolution 3D structures have been obtained yet. Membrane protein biogenesis is more complex than that of the soluble proteins and its recombinant biosynthesis has been a major drawback, thus delaying their further structural characterization. Indeed, the major limitation in structure determination of MP is the low yield achieved in recombinant expression, usually coupled to low functionality, pinpointing the optimization target in recombinant MP research. Recently, the growing attention that have been dedicated to the upstream stage of MP bioprocesses allowed great advances, permitting the evolution of the number of MP solved structures. In this review, we analyse and discuss effective solutions and technical advances at the level of the upstream stage using prokaryotic and eukaryotic organisms foreseeing an increase in expression yields of correctly folded MP and that may facilitate the determination of their three-dimensional structure. A section on techniques used to protein quality control and further structure determination of MP is also included. Lastly, a critical assessment of major factors contributing for a good decision-making process related to the upstream stage of MP is presented.
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spelling Smoothing membrane protein structure determination by initial upstream stage improvementsBacteriaHumansMembrane ProteinsMicroorganisms, Genetically-ModifiedMolecular ConformationProtein FoldingRecombinant ProteinsProtein BiosynthesisMembrane proteins (MP) constitute 20-30% of all proteins encoded by the genome of various organisms and perform a wide range of essential biological functions. However, despite they represent the largest class of protein drug targets, a relatively small number high-resolution 3D structures have been obtained yet. Membrane protein biogenesis is more complex than that of the soluble proteins and its recombinant biosynthesis has been a major drawback, thus delaying their further structural characterization. Indeed, the major limitation in structure determination of MP is the low yield achieved in recombinant expression, usually coupled to low functionality, pinpointing the optimization target in recombinant MP research. Recently, the growing attention that have been dedicated to the upstream stage of MP bioprocesses allowed great advances, permitting the evolution of the number of MP solved structures. In this review, we analyse and discuss effective solutions and technical advances at the level of the upstream stage using prokaryotic and eukaryotic organisms foreseeing an increase in expression yields of correctly folded MP and that may facilitate the determination of their three-dimensional structure. A section on techniques used to protein quality control and further structure determination of MP is also included. Lastly, a critical assessment of major factors contributing for a good decision-making process related to the upstream stage of MP is presented.Springer2020-07-20T00:00:00Z2019-07-20T00:00:00Z2019-07-20info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfapplication/pdfhttp://hdl.handle.net/10773/27029eng0175-759810.1007/s00253-019-09873-1Pedro, Augusto QuaresmaQueiroz, João AntónioPassarinha, Luís Antónioinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T11:52:24Zoai:ria.ua.pt:10773/27029Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T02:59:55.404773Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Smoothing membrane protein structure determination by initial upstream stage improvements
title Smoothing membrane protein structure determination by initial upstream stage improvements
spellingShingle Smoothing membrane protein structure determination by initial upstream stage improvements
Pedro, Augusto Quaresma
Bacteria
Humans
Membrane Proteins
Microorganisms, Genetically-Modified
Molecular Conformation
Protein Folding
Recombinant Proteins
Protein Biosynthesis
title_short Smoothing membrane protein structure determination by initial upstream stage improvements
title_full Smoothing membrane protein structure determination by initial upstream stage improvements
title_fullStr Smoothing membrane protein structure determination by initial upstream stage improvements
title_full_unstemmed Smoothing membrane protein structure determination by initial upstream stage improvements
title_sort Smoothing membrane protein structure determination by initial upstream stage improvements
author Pedro, Augusto Quaresma
author_facet Pedro, Augusto Quaresma
Queiroz, João António
Passarinha, Luís António
author_role author
author2 Queiroz, João António
Passarinha, Luís António
author2_role author
author
dc.contributor.author.fl_str_mv Pedro, Augusto Quaresma
Queiroz, João António
Passarinha, Luís António
dc.subject.por.fl_str_mv Bacteria
Humans
Membrane Proteins
Microorganisms, Genetically-Modified
Molecular Conformation
Protein Folding
Recombinant Proteins
Protein Biosynthesis
topic Bacteria
Humans
Membrane Proteins
Microorganisms, Genetically-Modified
Molecular Conformation
Protein Folding
Recombinant Proteins
Protein Biosynthesis
description Membrane proteins (MP) constitute 20-30% of all proteins encoded by the genome of various organisms and perform a wide range of essential biological functions. However, despite they represent the largest class of protein drug targets, a relatively small number high-resolution 3D structures have been obtained yet. Membrane protein biogenesis is more complex than that of the soluble proteins and its recombinant biosynthesis has been a major drawback, thus delaying their further structural characterization. Indeed, the major limitation in structure determination of MP is the low yield achieved in recombinant expression, usually coupled to low functionality, pinpointing the optimization target in recombinant MP research. Recently, the growing attention that have been dedicated to the upstream stage of MP bioprocesses allowed great advances, permitting the evolution of the number of MP solved structures. In this review, we analyse and discuss effective solutions and technical advances at the level of the upstream stage using prokaryotic and eukaryotic organisms foreseeing an increase in expression yields of correctly folded MP and that may facilitate the determination of their three-dimensional structure. A section on techniques used to protein quality control and further structure determination of MP is also included. Lastly, a critical assessment of major factors contributing for a good decision-making process related to the upstream stage of MP is presented.
publishDate 2019
dc.date.none.fl_str_mv 2019-07-20T00:00:00Z
2019-07-20
2020-07-20T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10773/27029
url http://hdl.handle.net/10773/27029
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0175-7598
10.1007/s00253-019-09873-1
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dc.publisher.none.fl_str_mv Springer
publisher.none.fl_str_mv Springer
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instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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