Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean

Bibliographic Details
Main Author: Sousa, Ricardo
Publication Date: 2021
Other Authors: Vasconcelos, Joana, Vera-Escalona, Iván, Delgado, João, Freitas, Mafalda, González, José A., Riera, Rodrigo
Format: Article
Language: eng
Source: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Download full: http://hdl.handle.net/10400.13/4338
Summary: Studies on microbial communities are pivotal to understand the role and the evolutionary paths of the host and their associated microorganisms in the ecosystems. Meta-genomics techniques have proven to be one of the most efective tools in the identifcation of endosymbiotic communities of host species. The microbiome of the highly exploited topshell Phorcus sauciatus was characterized in the Northeastern Atlantic (Portugal, Madeira, Selvagens, Canaries and Azores). Alpha diversity analysis based on observed OTUs showed signifcant diferences among regions. The Principal Coordinates Analysis of beta-diversity based on presence/absence showed three well diferentiated groups, one from Azores, a second from Madeira and the third one for mainland Portugal, Selvagens and the Canaries. The microbiome results may be mainly explained by large-scale oceanographic processes of the study region, i.e., the North Atlantic Subtropical Gyre, and specifcally by the Canary Current. Our results suggest the feasibility of microbiome as a model study to unravel biogeographic and evolutionary processes in marine species with high dispersive potential.
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spelling Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic OceanPhorcus sauciatusMicrobiomeOcean currentsNE Atlantic Ocean.Faculdade de Ciências da VidaStudies on microbial communities are pivotal to understand the role and the evolutionary paths of the host and their associated microorganisms in the ecosystems. Meta-genomics techniques have proven to be one of the most efective tools in the identifcation of endosymbiotic communities of host species. The microbiome of the highly exploited topshell Phorcus sauciatus was characterized in the Northeastern Atlantic (Portugal, Madeira, Selvagens, Canaries and Azores). Alpha diversity analysis based on observed OTUs showed signifcant diferences among regions. The Principal Coordinates Analysis of beta-diversity based on presence/absence showed three well diferentiated groups, one from Azores, a second from Madeira and the third one for mainland Portugal, Selvagens and the Canaries. The microbiome results may be mainly explained by large-scale oceanographic processes of the study region, i.e., the North Atlantic Subtropical Gyre, and specifcally by the Canary Current. Our results suggest the feasibility of microbiome as a model study to unravel biogeographic and evolutionary processes in marine species with high dispersive potential.Nature ResearchDigitUMaSousa, RicardoVasconcelos, JoanaVera-Escalona, IvánDelgado, JoãoFreitas, MafaldaGonzález, José A.Riera, Rodrigo2022-06-20T13:49:34Z20212021-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.13/4338engSousa, R., Vasconcelos, J., Vera-Escalona, I., Delgado, J., Freitas, M., González, J. A., & Riera, R. (2021). Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean. Scientific Reports, 11(1), 1-11. https://doi.org/10.1038/s41598-021-91448-010.1038/s41598-021-91448-0info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-06-25T03:30:36Zoai:digituma.uma.pt:10400.13/4338Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:08:15.878454Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean
title Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean
spellingShingle Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean
Sousa, Ricardo
Phorcus sauciatus
Microbiome
Ocean currents
NE Atlantic Ocean
.
Faculdade de Ciências da Vida
title_short Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean
title_full Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean
title_fullStr Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean
title_full_unstemmed Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean
title_sort Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean
author Sousa, Ricardo
author_facet Sousa, Ricardo
Vasconcelos, Joana
Vera-Escalona, Iván
Delgado, João
Freitas, Mafalda
González, José A.
Riera, Rodrigo
author_role author
author2 Vasconcelos, Joana
Vera-Escalona, Iván
Delgado, João
Freitas, Mafalda
González, José A.
Riera, Rodrigo
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv DigitUMa
dc.contributor.author.fl_str_mv Sousa, Ricardo
Vasconcelos, Joana
Vera-Escalona, Iván
Delgado, João
Freitas, Mafalda
González, José A.
Riera, Rodrigo
dc.subject.por.fl_str_mv Phorcus sauciatus
Microbiome
Ocean currents
NE Atlantic Ocean
.
Faculdade de Ciências da Vida
topic Phorcus sauciatus
Microbiome
Ocean currents
NE Atlantic Ocean
.
Faculdade de Ciências da Vida
description Studies on microbial communities are pivotal to understand the role and the evolutionary paths of the host and their associated microorganisms in the ecosystems. Meta-genomics techniques have proven to be one of the most efective tools in the identifcation of endosymbiotic communities of host species. The microbiome of the highly exploited topshell Phorcus sauciatus was characterized in the Northeastern Atlantic (Portugal, Madeira, Selvagens, Canaries and Azores). Alpha diversity analysis based on observed OTUs showed signifcant diferences among regions. The Principal Coordinates Analysis of beta-diversity based on presence/absence showed three well diferentiated groups, one from Azores, a second from Madeira and the third one for mainland Portugal, Selvagens and the Canaries. The microbiome results may be mainly explained by large-scale oceanographic processes of the study region, i.e., the North Atlantic Subtropical Gyre, and specifcally by the Canary Current. Our results suggest the feasibility of microbiome as a model study to unravel biogeographic and evolutionary processes in marine species with high dispersive potential.
publishDate 2021
dc.date.none.fl_str_mv 2021
2021-01-01T00:00:00Z
2022-06-20T13:49:34Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.13/4338
url http://hdl.handle.net/10400.13/4338
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Sousa, R., Vasconcelos, J., Vera-Escalona, I., Delgado, J., Freitas, M., González, J. A., & Riera, R. (2021). Major ocean currents may shape the microbiome of the topshell Phorcus sauciatus in the NE Atlantic Ocean. Scientific Reports, 11(1), 1-11. https://doi.org/10.1038/s41598-021-91448-0
10.1038/s41598-021-91448-0
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Nature Research
publisher.none.fl_str_mv Nature Research
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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