Estimation of capture probabilities using generalized estimating equations and mixed effects approaches

Detalhes bibliográficos
Autor(a) principal: Akanda, Md. Abdus Salam
Data de Publicação: 2014
Outros Autores: Alpizar-Jara, Russell
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10174/13755
Resumo: Modeling individual heterogeneity in capture probabilities has been one of the most challenging tasks in capture-recapture studies. Heterogeneity in capture probabilities can be modeled as a function of individual covariates, but correlation structure among capture occasions should be taking into account. A proposed generalized estimating equations (GEE) and generalized linear mixed modeling (GLMM) approaches can be used to estimate capture probabilities and population size for capture-recapture closed population models. An example is used for an illustrative application and for comparison with currently used methodology. A simulation study is also conducted to show the performance of the estimation procedures. Our simulation results show that the proposed quasi-likelihood based on GEE approach provides lower SE than partial likelihood based on either generalized linear models (GLM) or GLMM approaches for estimating population size in a closed capture-recapture experiment. Estimator performance is good if a large proportion of individuals are captured. For cases where only a small proportion of individuals are captured, the estimates become unstable, but the GEE approach outperforms the other methods.
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spelling Estimation of capture probabilities using generalized estimating equations and mixed effects approachesClosed populationGeneralized linear mixed modelsGeneralized linear modelsHeterogeneityPopulation size estimationModeling individual heterogeneity in capture probabilities has been one of the most challenging tasks in capture-recapture studies. Heterogeneity in capture probabilities can be modeled as a function of individual covariates, but correlation structure among capture occasions should be taking into account. A proposed generalized estimating equations (GEE) and generalized linear mixed modeling (GLMM) approaches can be used to estimate capture probabilities and population size for capture-recapture closed population models. An example is used for an illustrative application and for comparison with currently used methodology. A simulation study is also conducted to show the performance of the estimation procedures. Our simulation results show that the proposed quasi-likelihood based on GEE approach provides lower SE than partial likelihood based on either generalized linear models (GLM) or GLMM approaches for estimating population size in a closed capture-recapture experiment. Estimator performance is good if a large proportion of individuals are captured. For cases where only a small proportion of individuals are captured, the estimates become unstable, but the GEE approach outperforms the other methods.John Wiley and Sons Ltd2015-03-30T10:45:55Z2015-03-302014-04-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10174/13755http://hdl.handle.net/10174/13755engAkanda, M.A.S.; Alpizar-Jara, R (2014). Estimation of capture probabilities using generalized estimating equations and mixed effects approaches. Ecology and Evolution, Volume: 4 Issue: 7 Pages: 1158-1165. DOI: 10.1002/ece3.1000http://onlinelibrary.wiley.com/doi/10.1002/ece3.1000/pdfndalpizar@uevora.pt336Akanda, Md. Abdus SalamAlpizar-Jara, Russellinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-03T18:59:41Zoai:dspace.uevora.pt:10174/13755Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:07:13.847475Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Estimation of capture probabilities using generalized estimating equations and mixed effects approaches
title Estimation of capture probabilities using generalized estimating equations and mixed effects approaches
spellingShingle Estimation of capture probabilities using generalized estimating equations and mixed effects approaches
Akanda, Md. Abdus Salam
Closed population
Generalized linear mixed models
Generalized linear models
Heterogeneity
Population size estimation
title_short Estimation of capture probabilities using generalized estimating equations and mixed effects approaches
title_full Estimation of capture probabilities using generalized estimating equations and mixed effects approaches
title_fullStr Estimation of capture probabilities using generalized estimating equations and mixed effects approaches
title_full_unstemmed Estimation of capture probabilities using generalized estimating equations and mixed effects approaches
title_sort Estimation of capture probabilities using generalized estimating equations and mixed effects approaches
author Akanda, Md. Abdus Salam
author_facet Akanda, Md. Abdus Salam
Alpizar-Jara, Russell
author_role author
author2 Alpizar-Jara, Russell
author2_role author
dc.contributor.author.fl_str_mv Akanda, Md. Abdus Salam
Alpizar-Jara, Russell
dc.subject.por.fl_str_mv Closed population
Generalized linear mixed models
Generalized linear models
Heterogeneity
Population size estimation
topic Closed population
Generalized linear mixed models
Generalized linear models
Heterogeneity
Population size estimation
description Modeling individual heterogeneity in capture probabilities has been one of the most challenging tasks in capture-recapture studies. Heterogeneity in capture probabilities can be modeled as a function of individual covariates, but correlation structure among capture occasions should be taking into account. A proposed generalized estimating equations (GEE) and generalized linear mixed modeling (GLMM) approaches can be used to estimate capture probabilities and population size for capture-recapture closed population models. An example is used for an illustrative application and for comparison with currently used methodology. A simulation study is also conducted to show the performance of the estimation procedures. Our simulation results show that the proposed quasi-likelihood based on GEE approach provides lower SE than partial likelihood based on either generalized linear models (GLM) or GLMM approaches for estimating population size in a closed capture-recapture experiment. Estimator performance is good if a large proportion of individuals are captured. For cases where only a small proportion of individuals are captured, the estimates become unstable, but the GEE approach outperforms the other methods.
publishDate 2014
dc.date.none.fl_str_mv 2014-04-01T00:00:00Z
2015-03-30T10:45:55Z
2015-03-30
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10174/13755
http://hdl.handle.net/10174/13755
url http://hdl.handle.net/10174/13755
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Akanda, M.A.S.; Alpizar-Jara, R (2014). Estimation of capture probabilities using generalized estimating equations and mixed effects approaches. Ecology and Evolution, Volume: 4 Issue: 7 Pages: 1158-1165. DOI: 10.1002/ece3.1000
http://onlinelibrary.wiley.com/doi/10.1002/ece3.1000/pdf
nd
alpizar@uevora.pt
336
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv John Wiley and Sons Ltd
publisher.none.fl_str_mv John Wiley and Sons Ltd
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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