Separation of the genera in the subtribe Cassiinae (Leguminosae: Caesalpinioidae) using molecular markers
Autor(a) principal: | |
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Data de Publicação: | 2011 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Acta Botanica Brasilica |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-33062011000100026 |
Resumo: | Random amplified polymorphic DNA (RAPD), Inter simple sequence repeat (ISSR) and Amplified fragment length polymorphism (AFLP) markers were used to verify the segregation of the genus Cassia L. senso lato into three distinct genera namely Chamaecrista Moench., Senna P. Mill. and Cassia L. sensostricto Eighteen representatives of the three taxa were characterized using the molecular markers. 25 RAPD, six ISSR primers and six AFLP primer combinations resulted in the amplification of 612, 115 and 622 bands (loci) respectively. Most of the loci are found to be polymorphic, showing high degrees of genetic diversity among the different taxa studied. The dendrogram constructed on the basis of the RAPD, ISSR and AFLP data using SHAN clustering, divided Cassia L. senso lato. into three different clusters as Chamaecrista Moench. Senna P. Mill. and Cassia L. senso stricto High bootstrap value revealed that all the clusters were stable and robust. It was observed from the present investigation that these genera have their identity at molecular level, which supports the elevation of the genus Cassia L. senso lato to the level of subtribe Cassiinae and segregation into three distinct genera instead of intrageneric categories. |
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Acta Botanica Brasilica |
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Separation of the genera in the subtribe Cassiinae (Leguminosae: Caesalpinioidae) using molecular markersAFLPCassiaISSRMolecular phylogenyRAPDRandom amplified polymorphic DNA (RAPD), Inter simple sequence repeat (ISSR) and Amplified fragment length polymorphism (AFLP) markers were used to verify the segregation of the genus Cassia L. senso lato into three distinct genera namely Chamaecrista Moench., Senna P. Mill. and Cassia L. sensostricto Eighteen representatives of the three taxa were characterized using the molecular markers. 25 RAPD, six ISSR primers and six AFLP primer combinations resulted in the amplification of 612, 115 and 622 bands (loci) respectively. Most of the loci are found to be polymorphic, showing high degrees of genetic diversity among the different taxa studied. The dendrogram constructed on the basis of the RAPD, ISSR and AFLP data using SHAN clustering, divided Cassia L. senso lato. into three different clusters as Chamaecrista Moench. Senna P. Mill. and Cassia L. senso stricto High bootstrap value revealed that all the clusters were stable and robust. It was observed from the present investigation that these genera have their identity at molecular level, which supports the elevation of the genus Cassia L. senso lato to the level of subtribe Cassiinae and segregation into three distinct genera instead of intrageneric categories.Sociedade Botânica do Brasil2011-03-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-33062011000100026Acta Botanica Brasilica v.25 n.1 2011reponame:Acta Botanica Brasilicainstname:Sociedade Botânica do Brasil (SBB)instacron:SBB10.1590/S0102-33062011000100026info:eu-repo/semantics/openAccessAcharya,LaxmikantaMukherjee,Arup KumarPanda,Pratap Chandraeng2011-07-01T00:00:00Zoai:scielo:S0102-33062011000100026Revistahttps://www.scielo.br/j/abb/ONGhttps://old.scielo.br/oai/scielo-oai.phpacta@botanica.org.br||acta@botanica.org.br|| f.a.r.santos@gmail.com1677-941X0102-3306opendoar:2011-07-01T00:00Acta Botanica Brasilica - Sociedade Botânica do Brasil (SBB)false |
dc.title.none.fl_str_mv |
Separation of the genera in the subtribe Cassiinae (Leguminosae: Caesalpinioidae) using molecular markers |
title |
Separation of the genera in the subtribe Cassiinae (Leguminosae: Caesalpinioidae) using molecular markers |
spellingShingle |
Separation of the genera in the subtribe Cassiinae (Leguminosae: Caesalpinioidae) using molecular markers Acharya,Laxmikanta AFLP Cassia ISSR Molecular phylogeny RAPD |
title_short |
Separation of the genera in the subtribe Cassiinae (Leguminosae: Caesalpinioidae) using molecular markers |
title_full |
Separation of the genera in the subtribe Cassiinae (Leguminosae: Caesalpinioidae) using molecular markers |
title_fullStr |
Separation of the genera in the subtribe Cassiinae (Leguminosae: Caesalpinioidae) using molecular markers |
title_full_unstemmed |
Separation of the genera in the subtribe Cassiinae (Leguminosae: Caesalpinioidae) using molecular markers |
title_sort |
Separation of the genera in the subtribe Cassiinae (Leguminosae: Caesalpinioidae) using molecular markers |
author |
Acharya,Laxmikanta |
author_facet |
Acharya,Laxmikanta Mukherjee,Arup Kumar Panda,Pratap Chandra |
author_role |
author |
author2 |
Mukherjee,Arup Kumar Panda,Pratap Chandra |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Acharya,Laxmikanta Mukherjee,Arup Kumar Panda,Pratap Chandra |
dc.subject.por.fl_str_mv |
AFLP Cassia ISSR Molecular phylogeny RAPD |
topic |
AFLP Cassia ISSR Molecular phylogeny RAPD |
description |
Random amplified polymorphic DNA (RAPD), Inter simple sequence repeat (ISSR) and Amplified fragment length polymorphism (AFLP) markers were used to verify the segregation of the genus Cassia L. senso lato into three distinct genera namely Chamaecrista Moench., Senna P. Mill. and Cassia L. sensostricto Eighteen representatives of the three taxa were characterized using the molecular markers. 25 RAPD, six ISSR primers and six AFLP primer combinations resulted in the amplification of 612, 115 and 622 bands (loci) respectively. Most of the loci are found to be polymorphic, showing high degrees of genetic diversity among the different taxa studied. The dendrogram constructed on the basis of the RAPD, ISSR and AFLP data using SHAN clustering, divided Cassia L. senso lato. into three different clusters as Chamaecrista Moench. Senna P. Mill. and Cassia L. senso stricto High bootstrap value revealed that all the clusters were stable and robust. It was observed from the present investigation that these genera have their identity at molecular level, which supports the elevation of the genus Cassia L. senso lato to the level of subtribe Cassiinae and segregation into three distinct genera instead of intrageneric categories. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011-03-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-33062011000100026 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-33062011000100026 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S0102-33062011000100026 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Botânica do Brasil |
publisher.none.fl_str_mv |
Sociedade Botânica do Brasil |
dc.source.none.fl_str_mv |
Acta Botanica Brasilica v.25 n.1 2011 reponame:Acta Botanica Brasilica instname:Sociedade Botânica do Brasil (SBB) instacron:SBB |
instname_str |
Sociedade Botânica do Brasil (SBB) |
instacron_str |
SBB |
institution |
SBB |
reponame_str |
Acta Botanica Brasilica |
collection |
Acta Botanica Brasilica |
repository.name.fl_str_mv |
Acta Botanica Brasilica - Sociedade Botânica do Brasil (SBB) |
repository.mail.fl_str_mv |
acta@botanica.org.br||acta@botanica.org.br|| f.a.r.santos@gmail.com |
_version_ |
1752126660015030272 |